RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 UBR7Q8N806 425 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 RBBP8NLQ8NC74 664 aaPredicted RBP11.92□□□□□ -0.5
CLDN11-205ENST00000480067 ZNF461Q8TAF7 563 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 MYCBPAPQ8TBZ2 947 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 WHAMMQ8TF30 809 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 TWNKQ96RR1 684 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 TMEM209Q96SK2 561 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 GAS2L1Q99501 681 aaPredicted RBP11.92□□□□□ -0.5
CLDN11-205ENST00000480067 ELOVL4Q9GZR5 314 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 KIAA1257Q9ULG3 409 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 CNTN6Q9UQ52 1028 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 LUC7L2Q9Y383 392 aaKnown RBP11.92□□□□□ -0.5
CLDN11-205ENST00000480067 NME7Q9Y5B8 376 aa11.92□□□□□ -0.5
CLDN11-205ENST00000480067 NLRC5Q86WI3 1866 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 XIRP2A4UGR9 3374 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 A0A1W2PQJ5 194 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 CYP26A1O43174 497 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 PAEPP09466 180 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 CD19P15391 556 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 CDR1P51861 262 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 JAM2P57087 298 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 BPIFB4P59827 614 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 ROR1Q01973 937 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 CYP27A1Q02318 531 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 PTK2Q05397 1052 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 MDH1BQ5I0G3 518 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 TPGS2Q68CL5 300 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 FAM171BQ6P995 826 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 C4orf50Q6ZRC1 276 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 Q7L0L9 218 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 FMNL3Q8IVF7 1028 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 C12orf29Q8N999 325 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 SLC4A11Q8NBS3 891 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 ANP32BQ92688 251 aaKnown RBP11.91□□□□□ -0.5
CLDN11-205ENST00000480067 PGLYRP2Q96PD5 576 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 TTYH3Q9C0H2 523 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 GPR88Q9GZN0 384 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 NSUN3Q9H649 340 aaKnown RBP11.91□□□□□ -0.5
CLDN11-205ENST00000480067 CRTAC1Q9NQ79 661 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 MYO6Q9UM54 1294 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 CAPN11Q9UMQ6 739 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 MYO9BQ13459 2157 aa11.91□□□□□ -0.5
CLDN11-205ENST00000480067 REV3LO60673 3130 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 WDR27A2RRH5 827 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 GFPT2O94808 682 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 GLUD1P00367 558 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 GYPCP04921 128 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 CCDC172P0C7W6 258 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 PNMA6AP0CW24 399 aaPredicted RBP11.9□□□□□ -0.5
CLDN11-205ENST00000480067 VDRP11473 427 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 ATF2P15336 505 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 POU3F3P20264 500 aaPredicted RBP11.9□□□□□ -0.5
CLDN11-205ENST00000480067 CASP14P31944 242 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 ELF1P32519 619 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 SOX5P35711 763 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 NRIP1P48552 1158 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 FXR1P51114 621 aaKnown RBP eCLIP11.9□□□□□ -0.5
CLDN11-205ENST00000480067 ZNF132P52740 706 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 ZBED6P86452 979 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 ARID5AQ03989 594 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 ADCY1Q08828 1119 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 ADGRE1Q14246 886 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 RNF19BQ6ZMZ0 732 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 ADGRD2Q7Z7M1 963 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 SPATA2LQ8IUW3 424 aaPredicted RBP11.9□□□□□ -0.5
CLDN11-205ENST00000480067 C2orf15Q8WU43 125 aaKnown RBP11.9□□□□□ -0.5
CLDN11-205ENST00000480067 CYFIP2Q96F07 1278 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 PCED1BQ96HM7 432 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 CDCA3Q99618 268 aaPredicted RBP11.9□□□□□ -0.5
CLDN11-205ENST00000480067 LPIN3Q9BQK8 851 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 NUCKS1Q9H1E3 243 aaKnown RBP11.9□□□□□ -0.5
CLDN11-205ENST00000480067 IGFLR1Q9H665 355 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 AFF4Q9UHB7 1163 aaKnown RBP11.9□□□□□ -0.5
CLDN11-205ENST00000480067 DPP7Q9UHL4 492 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 PCDHB5Q9Y5E4 795 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 MTCH2Q9Y6C9 303 aa11.9□□□□□ -0.5
CLDN11-205ENST00000480067 PLXNA4Q9HCM2 1894 aa11.9□□□□□ -0.51
CLDN11-205ENST00000480067 LRRC53A6NM62 1247 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 PRRG1O14668 218 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 TGM5O43548 720 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 CLASP2O75122 1294 aaKnown RBP11.89□□□□□ -0.51
CLDN11-205ENST00000480067 ABLIM3O94929 683 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 C1RP00736 705 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 SPATA31D3P0C874 917 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 ATXN8OSP0DMR3 200 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 GNA15P30679 374 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 CLCN1P35523 988 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 CLCN4P51793 760 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 TSR1Q2NL82 804 aaKnown RBP11.89□□□□□ -0.51
CLDN11-205ENST00000480067 SGO2Q562F6 1265 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 TCEAL5Q5H9L2 206 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 SFMBT2Q5VUG0 894 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 SPATA31D4Q6ZUB0 917 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 SLC47A2Q86VL8 602 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 ATAD1Q8NBU5 361 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 SLC2A14Q8TDB8 520 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 BAP1Q92560 729 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 CDX2Q99626 313 aaPredicted RBP11.89□□□□□ -0.51
CLDN11-205ENST00000480067 PKMYT1Q99640 499 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 MED10Q9BTT4 135 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms