RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 PSMD5Q16401 504 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 MAN2A1Q16706 1144 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 SV2CQ496J9 727 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 ANO6Q4KMQ2 910 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 TCP11X2Q5H9J9 407 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 C9orf57Q5W0N0 161 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 CEP135Q66GS9 1140 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 MAMSTRQ6ZN01 415 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 SV2AQ7L0J3 742 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 TRAPPC11Q7Z392 1133 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 DHX40Q8IX18 779 aaKnown RBP9.56□□□□□ -0.88
DDX56-211ENST00000479602 TMEM86AQ8N2M4 240 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 TOP6BLQ8N6T0 577 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 ITFG1Q8TB96 612 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 CLDN23Q96B33 292 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 CNOT6LQ96LI5 555 aaKnown RBP9.56□□□□□ -0.88
DDX56-211ENST00000479602 SRRTQ9BXP5 876 aaKnown RBP9.56□□□□□ -0.88
DDX56-211ENST00000479602 DNAJC25Q9H1X3 360 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 PCIF1Q9H4Z3 704 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 ARHGEF3Q9NR81 526 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 DPP3Q9NY33 737 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 HSFX1Q9UBD0 423 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 LIMA1Q9UHB6 759 aaKnown RBP9.56□□□□□ -0.88
DDX56-211ENST00000479602 FBXL21Q9UKT6 434 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 SIT1Q9Y3P8 196 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 VWA8A3KMH1 1905 aa9.56□□□□□ -0.88
DDX56-211ENST00000479602 PODXLO00592 558 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 NRG2O14511 850 aaPredicted RBP9.55□□□□□ -0.88
DDX56-211ENST00000479602 B3GAT3O94766 335 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 OAZ2O95190 189 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 SP9P0CG40 484 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 HARSP12081 509 aaKnown RBP9.55□□□□□ -0.88
DDX56-211ENST00000479602 TAF6P49848 677 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 LILRA4P59901 499 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 OSTNP61366 133 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 GCNT1Q02742 428 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 CETN1Q12798 172 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 MYO1EQ12965 1108 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 SGSM1Q2NKQ1 1148 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 ZNF528Q3MIS6 628 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 SLC44A4Q53GD3 710 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 TDRD10Q5VZ19 366 aaKnown RBP9.55□□□□□ -0.88
DDX56-211ENST00000479602 KLHL10Q6JEL2 608 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 GLYCTKQ8IVS8 523 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 C1orf210Q8IVY1 113 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 NPAS3Q8IXF0 933 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 SUMF1Q8NBK3 374 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 FBXL13Q8NEE6 735 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 ANKRD20A12PQ8NF67 263 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 ZNF461Q8TAF7 563 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 HASPINQ8TF76 798 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 IQCDQ96DY2 449 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 MTMR12Q9C0I1 747 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 PIDD1Q9HB75 910 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 TUBGCP4Q9UGJ1 667 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 PCDHB8Q9UN66 801 aa9.55□□□□□ -0.88
DDX56-211ENST00000479602 MTF2Q9Y483 593 aaPredicted RBP9.55□□□□□ -0.88
DDX56-211ENST00000479602 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.55□□□□□ -0.88
DDX56-211ENST00000479602 KANSL1LA0AUZ9 987 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 GOLGA8IPA6NC78 632 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 SPDYE4A6NLX3 237 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 GOLGA8JA6NMD2 632 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 GABRDO14764 452 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 LRRN2O75325 713 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 MOSPD3O75425 235 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 ECI2O75521 394 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 AFPP02771 609 aaKnown RBP9.54□□□□□ -0.88
DDX56-211ENST00000479602 DCNP07585 359 aaKnown RBP9.54□□□□□ -0.88
DDX56-211ENST00000479602 ATF2P15336 505 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 TNNI1P19237 187 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 TKTP29401 623 aaKnown RBP9.54□□□□□ -0.88
DDX56-211ENST00000479602 FMO5P49326 533 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 PRKCQQ04759 706 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 PPP3CAQ08209 521 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 INCA1Q0VD86 236 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 SMARCB1Q12824 385 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 NCOA4Q13772 614 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 MEA1Q16626 185 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 SLC5A9Q2M3M2 681 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 CCDC40Q4G0X9 1142 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 SEZ6Q53EL9 994 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 MIIPQ5JXC2 388 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 GLRA4Q5JXX5 417 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 PRSS36Q5K4E3 855 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 PPM1LQ5SGD2 360 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 SARM1Q6SZW1 724 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 ANKS3Q6ZW76 656 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 GET4Q7L5D6 327 aaPredicted RBP9.54□□□□□ -0.88
DDX56-211ENST00000479602 ENOSF1Q7L5Y1 443 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 CEP57Q86XR8 500 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 TCEAL8Q8IYN2 117 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 APPL2Q8NEU8 664 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 ST13P5Q8NFI4 369 aaPredicted RBP9.54□□□□□ -0.88
DDX56-211ENST00000479602 PJA1Q8NG27 643 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 OR5B17Q8NGF7 314 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 LMO3Q8TAP4 145 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 SLC7A14Q8TBB6 771 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 ZNF516Q92618 1163 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 CEP295NLQ96MC4 621 aa9.54□□□□□ -0.88
DDX56-211ENST00000479602 ERGIC2Q96RQ1 377 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms