RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 MYO1EQ12965 1108 aa15.39■□□□□ 0.05
ATG4B-218ENST00000479554 INTS6LQ5JSJ4 861 aaKnown RBP15.39■□□□□ 0.05
ATG4B-218ENST00000479554 SCARA3Q6AZY7 606 aa15.39■□□□□ 0.05
ATG4B-218ENST00000479554 ATL3Q6DD88 541 aa15.39■□□□□ 0.05
ATG4B-218ENST00000479554 UNC13DQ70J99 1090 aa15.39■□□□□ 0.05
ATG4B-218ENST00000479554 EPM2AIP1Q7L775 607 aaPredicted RBP15.39■□□□□ 0.05
ATG4B-218ENST00000479554 TOP6BLQ8N6T0 577 aa15.39■□□□□ 0.05
ATG4B-218ENST00000479554 OR5B17Q8NGF7 314 aa15.39■□□□□ 0.05
ATG4B-218ENST00000479554 SPATA18Q8TC71 538 aa15.39■□□□□ 0.05
ATG4B-218ENST00000479554 ZNF507Q8TCN5 953 aa15.39■□□□□ 0.05
ATG4B-218ENST00000479554 PI4K2AQ9BTU6 479 aa15.39■□□□□ 0.05
ATG4B-218ENST00000479554 IL21Q9HBE4 155 aa15.39■□□□□ 0.05
ATG4B-218ENST00000479554 OBP2AQ9NY56 170 aa15.39■□□□□ 0.05
ATG4B-218ENST00000479554 PCDHA7Q9UN72 937 aa15.39■□□□□ 0.05
ATG4B-218ENST00000479554 RIF1Q5UIP0 2472 aaKnown RBP15.39■□□□□ 0.05
ATG4B-218ENST00000479554 PTPRJQ12913 1337 aa15.39■□□□□ 0.05
ATG4B-218ENST00000479554 FAM186AA6NE01 2351 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 DMXL1Q9Y485 3027 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 SLC38A8A6NNN8 435 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 KINO60870 393 aaKnown RBP15.38■□□□□ 0.05
ATG4B-218ENST00000479554 PRAMEF12O95522 483 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 CSH1P0DML2 217 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 CSH2P0DML3 217 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 CCNE1P24864 410 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 PCSK1P29120 753 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 CASP1P29466 404 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 LHX1P48742 406 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 KPNA1P52294 538 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-218ENST00000479554 FZD5Q13467 585 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 DUOXA2Q1HG44 320 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 ARHGAP29Q52LW3 1261 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 C1orf228Q6PIY5 440 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 HS2ST1Q7LGA3 356 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 OSTM1Q86WC4 334 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 WDR49Q8IV35 697 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 NELFCDQ8IXH7 590 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 ZNF687Q8N1G0 1237 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 CHRDQ9H2X0 955 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 ABCB6Q9NP58 842 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 PRMT8Q9NR22 394 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-218ENST00000479554 AGPAT3Q9NRZ7 376 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 ZMYM5Q9UJ78 669 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 CFAP45Q9UL16 551 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 MAGED2Q9UNF1 606 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-218ENST00000479554 FANCMQ8IYD8 2048 aa15.38■□□□□ 0.05
ATG4B-218ENST00000479554 CACNA1IQ9P0X4 2223 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-218ENST00000479554 WEE1P30291 646 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 GPR15P49685 360 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 CYP2J2P51589 502 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 MLLT6P55198 1093 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-218ENST00000479554 RPL10AP62906 217 aaKnown RBP15.37■□□□□ 0.05
ATG4B-218ENST00000479554 EHHADHQ08426 723 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 MTAPQ13126 283 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 SNRNP35Q16560 246 aaKnown RBP15.37■□□□□ 0.05
ATG4B-218ENST00000479554 RESP18Q5W5W9 173 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 SPATA2LQ8IUW3 424 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-218ENST00000479554 RDH13Q8NBN7 331 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 STKLD1Q8NE28 680 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 BPIFB1Q8TDL5 484 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 SCFD1Q8WVM8 642 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 HPDLQ96IR7 371 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 ZFYVE19Q96K21 471 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 LRRC3BQ96PB8 259 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 FNBP1Q96RU3 617 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 PKMYT1Q99640 499 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 HINFPQ9BQA5 517 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 IER2Q9BTL4 223 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 BLZF1Q9H2G9 400 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 C8orf33Q9H7E9 229 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-218ENST00000479554 LMAN1LQ9HAT1 526 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 GTF3C4Q9UKN8 822 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 PCDHGA2Q9Y5H1 932 aa15.37■□□□□ 0.05
ATG4B-218ENST00000479554 GVINP1Q7Z2Y8 2422 aa15.36■□□□□ 0.05
ATG4B-218ENST00000479554 PTPRZ1P23471 2315 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-218ENST00000479554 PVALEFA0A1B0GWK0 134 aa15.36■□□□□ 0.05
ATG4B-218ENST00000479554 GABRDO14764 452 aa15.36■□□□□ 0.05
ATG4B-218ENST00000479554 CLIC2O15247 247 aa15.36■□□□□ 0.05
ATG4B-218ENST00000479554 TGFB1I1O43294 461 aa15.36■□□□□ 0.05
ATG4B-218ENST00000479554 HCRTO43612 131 aa15.36■□□□□ 0.05
ATG4B-218ENST00000479554 DLATP10515 647 aaKnown RBP15.36■□□□□ 0.05
ATG4B-218ENST00000479554 HMGA1P17096 107 aaKnown RBP15.36■□□□□ 0.05
ATG4B-218ENST00000479554 CYP2F1P24903 491 aa15.36■□□□□ 0.05
ATG4B-218ENST00000479554 DDX6P26196 483 aaKnown RBP eCLIP15.36■□□□□ 0.05
ATG4B-218ENST00000479554 AVPR1AP37288 418 aa15.36■□□□□ 0.05
ATG4B-218ENST00000479554 AFMP43652 599 aa15.36■□□□□ 0.05
ATG4B-218ENST00000479554 SOX9P48436 509 aa15.36■□□□□ 0.05
ATG4B-218ENST00000479554 NLRP12P59046 1061 aa15.36■□□□□ 0.05
ATG4B-218ENST00000479554 SNRPFP62306 86 aaKnown RBP15.36■□□□□ 0.05
ATG4B-218ENST00000479554 PLCB2Q00722 1185 aa15.36■□□□□ 0.05
ATG4B-218ENST00000479554 DNM1Q05193 864 aaKnown RBP15.36■□□□□ 0.05
ATG4B-218ENST00000479554 CUL4BQ13620 913 aa15.36■□□□□ 0.05
ATG4B-218ENST00000479554 CCDC142Q17RM4 750 aa15.36■□□□□ 0.05
ATG4B-218ENST00000479554 SOWAHAQ2M3V2 549 aa15.36■□□□□ 0.05
ATG4B-218ENST00000479554 SKOR2Q2VWA4 1001 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-218ENST00000479554 SDHAF4Q5VUM1 108 aa15.36■□□□□ 0.05
ATG4B-218ENST00000479554 TSSK4Q6SA08 328 aa15.36■□□□□ 0.05
ATG4B-218ENST00000479554 DPH6Q7L8W6 267 aa15.36■□□□□ 0.05
ATG4B-218ENST00000479554 CEP57L1Q8IYX8 460 aa15.36■□□□□ 0.05
ATG4B-218ENST00000479554 CMTM8Q8IZV2 173 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms