RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 TIMM13Q9Y5L4 95 aaPredicted RBP12.48□□□□□ -0.41
PDCD11-204ENST00000478543 PRR23AA6NEV1 266 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 PROB1E7EW31 1015 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 TMEM189-UBE2V1I3L0A0 370 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 CYP26A1O43174 497 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 HCRTO43612 131 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 ODC1P11926 461 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 SKILP12757 684 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 LAG3P18627 525 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 DEKP35659 375 aaKnown RBP12.47□□□□□ -0.41
PDCD11-204ENST00000478543 ALDH7A1P49419 539 aaKnown RBP12.47□□□□□ -0.41
PDCD11-204ENST00000478543 AARSP49588 968 aaKnown RBP eCLIP12.47□□□□□ -0.41
PDCD11-204ENST00000478543 RBM10P98175 930 aaKnown RBP12.47□□□□□ -0.41
PDCD11-204ENST00000478543 ZNF394Q53GI3 561 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 WSCD1Q658N2 575 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 TMEM270Q6UE05 265 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 KCNT2Q6UVM3 1135 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 OSTM1Q86WC4 334 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 TMEM173Q86WV6 379 aaPredicted RBP12.47□□□□□ -0.41
PDCD11-204ENST00000478543 ADGRF2Q8IZF7 708 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 PDCL2Q8N4E4 241 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 TOP6BLQ8N6T0 577 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 SMRP1Q8NCR6 262 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 SUSD3Q96L08 255 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 DNAJC7Q99615 494 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 PRRX2Q99811 253 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 NUCKS1Q9H1E3 243 aaKnown RBP12.47□□□□□ -0.41
PDCD11-204ENST00000478543 SNX25Q9H3E2 840 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 ZNHIT6Q9NWK9 470 aaKnown RBP12.47□□□□□ -0.41
PDCD11-204ENST00000478543 HMGXB4Q9UGU5 601 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 ADAM28Q9UKQ2 775 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 MYO6Q9UM54 1294 aa12.47□□□□□ -0.41
PDCD11-204ENST00000478543 FERP16591 822 aa12.46□□□□□ -0.41
PDCD11-204ENST00000478543 TKTP29401 623 aaKnown RBP12.46□□□□□ -0.41
PDCD11-204ENST00000478543 BMPR1AP36894 532 aa12.46□□□□□ -0.41
PDCD11-204ENST00000478543 NDST1P52848 882 aa12.46□□□□□ -0.41
PDCD11-204ENST00000478543 SIGLEC14Q08ET2 396 aa12.46□□□□□ -0.41
PDCD11-204ENST00000478543 TDRD12Q587J7 1177 aaKnown RBP12.46□□□□□ -0.41
PDCD11-204ENST00000478543 FUT10Q6P4F1 479 aa12.46□□□□□ -0.41
PDCD11-204ENST00000478543 METTL23Q86XA0 190 aa12.46□□□□□ -0.41
PDCD11-204ENST00000478543 FAM71AQ8IYT1 594 aa12.46□□□□□ -0.41
PDCD11-204ENST00000478543 OR6B3Q8NGW1 331 aa12.46□□□□□ -0.41
PDCD11-204ENST00000478543 KBTBD7Q8WVZ9 684 aa12.46□□□□□ -0.41
PDCD11-204ENST00000478543 JAKMIP2Q96AA8 810 aa12.46□□□□□ -0.41
PDCD11-204ENST00000478543 FAXDC2Q96IV6 333 aa12.46□□□□□ -0.41
PDCD11-204ENST00000478543 B3GALT6Q96L58 329 aa12.46□□□□□ -0.41
PDCD11-204ENST00000478543 PANX2Q96RD6 677 aa12.46□□□□□ -0.41
PDCD11-204ENST00000478543 TWNKQ96RR1 684 aa12.46□□□□□ -0.41
PDCD11-204ENST00000478543 ELOVL4Q9GZR5 314 aa12.46□□□□□ -0.41
PDCD11-204ENST00000478543 ACP6Q9NPH0 428 aa12.46□□□□□ -0.41
PDCD11-204ENST00000478543 PUF60Q9UHX1 559 aaKnown RBP12.46□□□□□ -0.41
PDCD11-204ENST00000478543 BARX2Q9UMQ3 279 aaPredicted RBP12.46□□□□□ -0.41
PDCD11-204ENST00000478543 PCDHB8Q9UN66 801 aa12.46□□□□□ -0.41
PDCD11-204ENST00000478543 PCDHGC5Q9Y5F6 944 aa12.46□□□□□ -0.41
PDCD11-204ENST00000478543 TSC2P49815 1807 aa12.46□□□□□ -0.42
PDCD11-204ENST00000478543 SF3B1O75533 1304 aaKnown RBP eCLIP12.45□□□□□ -0.424e-8■■■■■ 68.9
PDCD11-204ENST00000478543 PLXNA4Q9HCM2 1894 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 A8MXQ7 604 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 M0QZQ0 153 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 TRAPPC3O43617 180 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 CILPO75339 1184 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 TACC1O75410 805 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 PDGFRBP09619 1106 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 WARSP23381 471 aaKnown RBP12.45□□□□□ -0.42
PDCD11-204ENST00000478543 PAX3P23760 479 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 ACAT1P24752 427 aaKnown RBP12.45□□□□□ -0.42
PDCD11-204ENST00000478543 CLCN1P35523 988 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 GNL1P36915 607 aaPredicted RBP12.45□□□□□ -0.42
PDCD11-204ENST00000478543 KLHL30Q0D2K2 578 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 INCA1Q0VD86 236 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 FAM171A1Q5VUB5 890 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 TAF3Q5VWG9 929 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 WDR59Q6PJI9 974 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 LIMS2Q7Z4I7 341 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 IRF2BP2Q7Z5L9 587 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 SLC47A2Q86VL8 602 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 CEP57Q86XR8 500 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 LRRC8AQ8IWT6 810 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 SLC39A11Q8N1S5 342 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 WHAMMQ8TF30 809 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 SYN2Q92777 582 aaPredicted RBP12.45□□□□□ -0.42
PDCD11-204ENST00000478543 CLP1Q92989 425 aaKnown RBP12.45□□□□□ -0.42
PDCD11-204ENST00000478543 IGSF21Q96ID5 467 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 ZNF830Q96NB3 372 aaPredicted RBP12.45□□□□□ -0.42
PDCD11-204ENST00000478543 GPR62Q9BZJ7 368 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 AAASQ9NRG9 546 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 SPG21Q9NZD8 308 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 AIPL1Q9NZN9 384 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 NME7Q9Y5B8 376 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 ZNF292O60281 2723 aa12.45□□□□□ -0.42
PDCD11-204ENST00000478543 CFAP47Q6ZTR5 3102 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 ARHGEF37A1IGU5 675 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 NCK2O43639 380 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 SERPING1P05155 500 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 PLEKP08567 350 aaPredicted RBP12.44□□□□□ -0.42
PDCD11-204ENST00000478543 CCDC172P0C7W6 258 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 CD19P15391 556 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 TYMPP19971 482 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 BRD2P25440 801 aaKnown RBP12.44□□□□□ -0.42
PDCD11-204ENST00000478543 LMO2P25791 158 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms