RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 ACBD6Q9BR61 282 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 SLC46A2Q9BY10 475 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 RBM12Q9NTZ6 932 aaKnown RBP13.99□□□□□ -0.17
ABCF3-212ENST00000478288 ABI2Q9NYB9 513 aaPredicted RBP13.99□□□□□ -0.17
ABCF3-212ENST00000478288 ITGA11Q9UKX5 1188 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 PCDHB13Q9Y5F0 798 aa13.99□□□□□ -0.17
ABCF3-212ENST00000478288 HELZP42694 1942 aaKnown RBP13.98□□□□□ -0.17
ABCF3-212ENST00000478288 F11P03951 625 aa13.98□□□□□ -0.17
ABCF3-212ENST00000478288 CSH1P0DML2 217 aa13.98□□□□□ -0.17
ABCF3-212ENST00000478288 CSH2P0DML3 217 aa13.98□□□□□ -0.17
ABCF3-212ENST00000478288 SIM2Q14190 667 aaPredicted RBP13.98□□□□□ -0.17
ABCF3-212ENST00000478288 DYMQ7RTS9 669 aa13.98□□□□□ -0.17
ABCF3-212ENST00000478288 PDCL2Q8N4E4 241 aa13.98□□□□□ -0.17
ABCF3-212ENST00000478288 C1orf127Q8N9H9 656 aa13.98□□□□□ -0.17
ABCF3-212ENST00000478288 CXorf38Q8TB03 319 aa13.98□□□□□ -0.17
ABCF3-212ENST00000478288 NETO1Q8TDF5 533 aa13.98□□□□□ -0.17
ABCF3-212ENST00000478288 CACTINQ8WUQ7 758 aaKnown RBP13.98□□□□□ -0.17
ABCF3-212ENST00000478288 MYRFLQ96LU7 910 aa13.98□□□□□ -0.17
ABCF3-212ENST00000478288 FAM213AQ9BRX8 229 aa13.98□□□□□ -0.17
ABCF3-212ENST00000478288 GDAP2Q9NXN4 497 aa13.98□□□□□ -0.17
ABCF3-212ENST00000478288 RBAKQ9NYW8 714 aaPredicted RBP13.98□□□□□ -0.17
ABCF3-212ENST00000478288 UXTQ9UBK9 157 aaPredicted RBP13.98□□□□□ -0.17
ABCF3-212ENST00000478288 CLIC4Q9Y696 253 aa13.98□□□□□ -0.17
ABCF3-212ENST00000478288 EML5Q05BV3 1969 aa13.98□□□□□ -0.17
ABCF3-212ENST00000478288 VPS37CA5D8V6 355 aaPredicted RBP13.97□□□□□ -0.17
ABCF3-212ENST00000478288 CHURC1-FNTBB4DL54 471 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 TRDMT1O14717 391 aaKnown RBP13.97□□□□□ -0.17
ABCF3-212ENST00000478288 KIAA0391O15091 583 aaKnown RBP13.97□□□□□ -0.17
ABCF3-212ENST00000478288 HRO43593 1189 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 NOL4O94818 638 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 GCNT3O95395 438 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 POLR2BP30876 1174 aaKnown RBP13.97□□□□□ -0.17
ABCF3-212ENST00000478288 FNTBP49356 437 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 RPL10AP62906 217 aaKnown RBP13.97□□□□□ -0.17
ABCF3-212ENST00000478288 AMPD2Q01433 879 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 MYL7Q01449 175 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 TNK2Q07912 1038 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 KCNA1Q09470 495 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 PON2Q15165 354 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 CSRP2Q16527 193 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 CFAP221Q4G0U5 840 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 TMEM196Q5HYL7 178 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 PRR23BQ6ZRT6 265 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 MON1AQ86VX9 555 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 WDR5BQ86VZ2 330 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 TOP6BLQ8N6T0 577 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 GIPC2Q8TF65 315 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 MRPS31Q92665 395 aaKnown RBP13.97□□□□□ -0.17
ABCF3-212ENST00000478288 USP13Q92995 863 aaPredicted RBP13.97□□□□□ -0.17
ABCF3-212ENST00000478288 FUBP3Q96I24 572 aaKnown RBP eCLIP13.97□□□□□ -0.17
ABCF3-212ENST00000478288 CEP295NLQ96MC4 621 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 PKMYT1Q99640 499 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 IKZF4Q9H2S9 585 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 TMEM206Q9H813 350 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 HPS4Q9NQG7 708 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 TDP1Q9NUW8 608 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 TMLHEQ9NVH6 421 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 MYO16Q9Y6X6 1858 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 KIAA1549LQ6ZVL6 1849 aa13.97□□□□□ -0.17
ABCF3-212ENST00000478288 EXTL3O43909 919 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 HUS1O60921 280 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 ATG13O75143 517 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 ITGB3P05106 788 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 LHX1P48742 406 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 CASP5P51878 434 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 WNT7BP56706 349 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 TFAMQ00059 246 aaKnown RBP13.96□□□□□ -0.17
ABCF3-212ENST00000478288 DMWDQ09019 674 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 SPEM2Q0P670 501 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 GRSF1Q12849 480 aaKnown RBP eCLIP13.96□□□□□ -0.17
ABCF3-212ENST00000478288 BFSP1Q12934 665 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 RESTQ13127 1097 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 RUNX3Q13761 415 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 PDGFRLQ15198 375 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 INTS6LQ5JSJ4 861 aaKnown RBP13.96□□□□□ -0.17
ABCF3-212ENST00000478288 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.96□□□□□ -0.17
ABCF3-212ENST00000478288 GPIHBP1Q8IV16 184 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 EXOC4Q96A65 974 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 SAAL1Q96ER3 474 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 SMG9Q9H0W8 520 aaKnown RBP13.96□□□□□ -0.17
ABCF3-212ENST00000478288 GKN1Q9NS71 199 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 SEMA4GQ9NTN9 838 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 L1RE1Q9UN81 338 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 AGAP1Q9UPQ3 857 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 CCL26Q9Y258 94 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 USP24Q9UPU5 2620 aa13.96□□□□□ -0.17
ABCF3-212ENST00000478288 GABRDO14764 452 aa13.95□□□□□ -0.18
ABCF3-212ENST00000478288 SLC30A4O14863 429 aa13.95□□□□□ -0.18
ABCF3-212ENST00000478288 PRPF40AO75400 957 aaKnown RBP13.95□□□□□ -0.18
ABCF3-212ENST00000478288 TADA3O75528 432 aa13.95□□□□□ -0.18
ABCF3-212ENST00000478288 PCSK1P29120 753 aa13.95□□□□□ -0.18
ABCF3-212ENST00000478288 STAT6P42226 847 aa13.95□□□□□ -0.18
ABCF3-212ENST00000478288 RBP5P82980 135 aa13.95□□□□□ -0.18
ABCF3-212ENST00000478288 LPAL2Q16609 132 aa13.95□□□□□ -0.18
ABCF3-212ENST00000478288 PRR23CQ6ZRP0 262 aa13.95□□□□□ -0.18
ABCF3-212ENST00000478288 DPH6Q7L8W6 267 aa13.95□□□□□ -0.18
ABCF3-212ENST00000478288 LIMS2Q7Z4I7 341 aa13.95□□□□□ -0.18
ABCF3-212ENST00000478288 MAB21L3Q8N8X9 362 aa13.95□□□□□ -0.18
ABCF3-212ENST00000478288 TTC8Q8TAM2 541 aa13.95□□□□□ -0.18
ABCF3-212ENST00000478288 CHFRQ96EP1 664 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms