RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 CIZ1Q9ULV3 898 aaPredicted RBP12.54□□□□□ -0.4
SKI-202ENST00000478223 PCDHA5Q9Y5H7 936 aa12.54□□□□□ -0.4
SKI-202ENST00000478223 CACNA1IQ9P0X4 2223 aa12.54□□□□□ -0.4
SKI-202ENST00000478223 TRIM49BA6NDI0 452 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 LRRN2O75325 713 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 PDGFRBP09619 1106 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 TRIM49P0CI25 452 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 TRIM49CP0CI26 452 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 WARSP23381 471 aaKnown RBP12.53□□□□□ -0.4
SKI-202ENST00000478223 PMS1P54277 932 aaKnown RBP12.53□□□□□ -0.4
SKI-202ENST00000478223 CYP4F8P98187 520 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 BIRC3Q13489 604 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 WDR72Q3MJ13 1102 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 CYP4A22Q5TCH4 519 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 ISM2Q6H9L7 571 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 FAM171BQ6P995 826 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 MTSS1LQ765P7 747 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 SUGP1Q8IWZ8 645 aaKnown RBP12.53□□□□□ -0.4
SKI-202ENST00000478223 DCP1BQ8IZD4 617 aaKnown RBP12.53□□□□□ -0.4
SKI-202ENST00000478223 C2orf15Q8WU43 125 aaKnown RBP12.53□□□□□ -0.4
SKI-202ENST00000478223 MYLPFQ96A32 169 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 TIGD1Q96MW7 591 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 ASB16Q96NS5 453 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 MMS19Q96T76 1030 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 SYT15Q9BQS2 421 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 SDCBP2Q9H190 292 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 SMYD3Q9H7B4 428 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.53□□□□□ -0.42e-7■■■■■ 116.1
SKI-202ENST00000478223 SLC2A4RGQ9NR83 387 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 GDE1Q9NZC3 331 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 NXF1Q9UBU9 619 aaKnown RBP12.53□□□□□ -0.4
SKI-202ENST00000478223 FBXL21Q9UKT6 434 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 PCDHB5Q9Y5E4 795 aa12.53□□□□□ -0.4
SKI-202ENST00000478223 ZNF197O14709 1029 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 PI15O43692 258 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 ECI2O75521 394 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 MICAL2O94851 1124 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 STAU1O95793 577 aaKnown RBP12.52□□□□□ -0.41
SKI-202ENST00000478223 CD44P16070 742 aaKnown RBP12.52□□□□□ -0.41
SKI-202ENST00000478223 HMGA1P17096 107 aaKnown RBP12.52□□□□□ -0.41
SKI-202ENST00000478223 GABRR2P28476 465 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 AVPR2P30518 371 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 VIPR2P41587 438 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 LHX1P48742 406 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 TUFMP49411 452 aaKnown RBP12.52□□□□□ -0.41
SKI-202ENST00000478223 CDH8P55286 799 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 PPP3CAQ08209 521 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 TRPC3Q13507 836 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 NCOA4Q13772 614 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 GRM2Q14416 872 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 DDR2Q16832 855 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 ZACNQ401N2 412 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 ZNF658Q5TYW1 1059 aaPredicted RBP12.52□□□□□ -0.41
SKI-202ENST00000478223 SPOPLQ6IQ16 392 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 VITQ6UXI7 678 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 SCARA5Q6ZMJ2 495 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 DPH6Q7L8W6 267 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 TMEM150AQ86TG1 271 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 FLCNQ8NFG4 579 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 ZSCAN18Q8TBC5 510 aaPredicted RBP12.52□□□□□ -0.41
SKI-202ENST00000478223 SPATA18Q8TC71 538 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 FAM200AQ8TCP9 573 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 TMEM30AQ9NV96 361 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 MAN1B1Q9UKM7 699 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 R3HCC1Q9Y3T6 440 aaKnown RBP12.52□□□□□ -0.41
SKI-202ENST00000478223 EML5Q05BV3 1969 aa12.52□□□□□ -0.41
SKI-202ENST00000478223 MAPK13O15264 365 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 PHACTR2O75167 634 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 TACC1O75410 805 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 TADA3O75528 432 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 BMP6P22004 513 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 VAMP7P51809 220 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 CACNA2D1P54289 1103 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 TNNC1P63316 161 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 TCF15Q12870 199 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 ADAM9Q13443 819 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 NFE2Q16621 373 aaPredicted RBP12.51□□□□□ -0.41
SKI-202ENST00000478223 ZNF699Q32M78 642 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 MDH1BQ5I0G3 518 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 SV2AQ7L0J3 742 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 FAM186BQ8IYM0 893 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 LEMD2Q8NC56 503 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 TMC2Q8TDI7 906 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 SMARCD2Q92925 531 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 SMARCE1Q969G3 411 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 ELSPBP1Q96BH3 223 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 LRRC3BQ96PB8 259 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 ATXN3LQ9H3M9 355 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 MFSD1Q9H3U5 465 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 MMRN2Q9H8L6 949 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 VRTNQ9H8Y1 702 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 ARHGEF3Q9NR81 526 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 WNT16Q9UBV4 365 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 CDH9Q9ULB4 789 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 FRMD4BQ9Y2L6 1034 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 ASB3Q9Y575 518 aa12.51□□□□□ -0.41
SKI-202ENST00000478223 SHISA7A6NL88 538 aa12.5□□□□□ -0.41
SKI-202ENST00000478223 KIF20AO95235 890 aa12.5□□□□□ -0.41
SKI-202ENST00000478223 PRAMEF12O95522 483 aa12.5□□□□□ -0.41
SKI-202ENST00000478223 HLA-DRAP01903 254 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms