RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 CCDC124Q96CT7 223 aaKnown RBP10.33□□□□□ -0.76
COL13A1-207ENST00000478219 KREMEN1Q96MU8 473 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 VPS11Q9H270 941 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 RABGEF1Q9UJ41 708 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 ZNF180Q9UJW8 692 aa10.33□□□□□ -0.76
COL13A1-207ENST00000478219 PAIP2BQ9ULR5 123 aaKnown RBP10.33□□□□□ -0.76
COL13A1-207ENST00000478219 COL5A2P05997 1499 aaPredicted RBP10.33□□□□□ -0.76
COL13A1-207ENST00000478219 DENND3A2RUS2 1198 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 ETV4P43268 484 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 ALDH18A1P54886 795 aaKnown RBP10.32□□□□□ -0.76
COL13A1-207ENST00000478219 PLCB3Q01970 1234 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 TRIP10Q15642 601 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 SLC44A4Q53GD3 710 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 TSHZ1Q6ZSZ6 1077 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 DZIP1Q86YF9 867 aaKnown RBP10.32□□□□□ -0.76
COL13A1-207ENST00000478219 MYCT1Q8N699 235 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 FNDC8Q8TC99 324 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 FIZ1Q96SL8 496 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 PCIF1Q9H4Z3 704 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 GPAMQ9HCL2 828 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 AGPAT3Q9NRZ7 376 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 DNAJB4Q9UDY4 337 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 APPL1Q9UKG1 709 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 GTF3C4Q9UKN8 822 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 DNPEPQ9ULA0 475 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 TELO2Q9Y4R8 837 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 ITGB4P16144 1822 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 SPATA31A5Q5VU36 1347 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 SPATA31A6Q5VVP1 1343 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 SPATA31A7Q8IWB4 1347 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 ARHGAP42A6NI28 874 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 BTBD19C9JJ37 291 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 TBCAO75347 108 aaKnown RBP10.32□□□□□ -0.76
COL13A1-207ENST00000478219 TFPTP0C1Z6 253 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 C6orf222P0C671 652 aaPredicted RBP10.32□□□□□ -0.76
COL13A1-207ENST00000478219 KRT10P13645 584 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 CD58P19256 250 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 PMLP29590 882 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 STT3AP46977 705 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 EPHB1P54762 984 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 OXCT1P55809 520 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 TAS2R40P59535 323 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 BFSP1Q12934 665 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 ATP13A4Q4VNC1 1196 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 PRR16Q569H4 304 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 EFHC2Q5JST6 749 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 CDHR3Q6ZTQ4 885 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 ADGRF4Q8IZF3 695 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 POU5F2Q8N7G0 328 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 NEDD1Q8NHV4 660 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 SERAC1Q96JX3 654 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 PAFAH2Q99487 392 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 IQCGQ9H095 443 aaKnown RBP10.32□□□□□ -0.76
COL13A1-207ENST00000478219 HEY1Q9Y5J3 304 aa10.32□□□□□ -0.76
COL13A1-207ENST00000478219 DNALI1O14645 258 aaPredicted RBP10.31□□□□□ -0.76
COL13A1-207ENST00000478219 DHRS4L1P0CG22 281 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 MAPK4P31152 587 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 STIP1P31948 543 aaKnown RBP10.31□□□□□ -0.76
COL13A1-207ENST00000478219 SH3BGRP55822 239 aaPredicted RBP10.31□□□□□ -0.76
COL13A1-207ENST00000478219 COG7P83436 770 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 GPS1Q13098 491 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 RASA3Q14644 834 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 CCNG2Q16589 344 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 ANKDD1AQ495B1 522 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 C1orf220Q5T0J3 134 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 C6orf163Q5TEZ5 329 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 RINT1Q6NUQ1 792 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 IYDQ6PHW0 289 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 IFNLR1Q8IU57 520 aaPredicted RBP10.31□□□□□ -0.76
COL13A1-207ENST00000478219 ZFPM1Q8IX07 1006 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 PLEKHO2Q8TD55 490 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 IRGQQ8WZA9 623 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 DHX38Q92620 1227 aaKnown RBP10.31□□□□□ -0.76
COL13A1-207ENST00000478219 EBF4Q9BQW3 602 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 CCDC106Q9BWC9 280 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 SHCBP1LQ9BZQ2 653 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 C20orf27Q9GZN8 174 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 TMEM117Q9H0C3 514 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 C10orf88Q9H8K7 445 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 TAGLN3Q9UI15 199 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 ATF5Q9Y2D1 282 aaPredicted RBP10.31□□□□□ -0.76
COL13A1-207ENST00000478219 DDX60LQ5H9U9 1706 aaKnown RBP10.31□□□□□ -0.76
COL13A1-207ENST00000478219 SPECC1L-ADORA2AF8WAN1 911 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 PI4K2BG5E9Z4 385 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 ALOX15BO15296 676 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 AP1G1O43747 822 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 GRIN3BO60391 1043 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 SLITRK3O94933 977 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 TGDSO95455 350 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 GZMAP12544 262 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 ALOX15P16050 662 aaPredicted RBP10.31□□□□□ -0.76
COL13A1-207ENST00000478219 TAL1P17542 331 aaPredicted RBP10.31□□□□□ -0.76
COL13A1-207ENST00000478219 GLRA2P23416 452 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 RPA1P27694 616 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 MAN1A1P33908 653 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 MLH1P40692 756 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 SERPINB8P50452 374 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 PSMD7P51665 324 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 ARSEP51690 589 aa10.31□□□□□ -0.76
COL13A1-207ENST00000478219 ZNF200P98182 395 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms