RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 RBM23Q86U06 439 aaKnown RBP21.25■□□□□ 0.99
ACTB-210ENST00000477812 ZNF461Q8TAF7 563 aa21.25■□□□□ 0.99
ACTB-210ENST00000477812 TNIP3Q96KP6 325 aa21.25■□□□□ 0.99
ACTB-210ENST00000477812 PCMTD1Q96MG8 357 aaPredicted RBP21.25■□□□□ 0.99
ACTB-210ENST00000477812 CDCA3Q99618 268 aaPredicted RBP21.25■□□□□ 0.99
ACTB-210ENST00000477812 STK33Q9BYT3 514 aa21.25■□□□□ 0.99
ACTB-210ENST00000477812 CEP72Q9P209 647 aa21.25■□□□□ 0.99
ACTB-210ENST00000477812 PCDHB4Q9Y5E5 795 aa21.25■□□□□ 0.99
ACTB-210ENST00000477812 PNMA6AP0CW24 399 aaPredicted RBP21.24■□□□□ 0.99
ACTB-210ENST00000477812 CPB1P15086 417 aa21.24■□□□□ 0.99
ACTB-210ENST00000477812 KLRC2P26717 231 aa21.24■□□□□ 0.99
ACTB-210ENST00000477812 ZNF75DP51815 510 aa21.24■□□□□ 0.99
ACTB-210ENST00000477812 ARPP19P56211 112 aa21.24■□□□□ 0.99
ACTB-210ENST00000477812 PLCB2Q00722 1185 aa21.24■□□□□ 0.99
ACTB-210ENST00000477812 SLC39A12Q504Y0 691 aa21.24■□□□□ 0.99
ACTB-210ENST00000477812 ZNF394Q53GI3 561 aa21.24■□□□□ 0.99
ACTB-210ENST00000477812 TPGS2Q68CL5 300 aa21.24■□□□□ 0.99
ACTB-210ENST00000477812 TMEM270Q6UE05 265 aa21.24■□□□□ 0.99
ACTB-210ENST00000477812 VSTM4Q8IW00 320 aa21.24■□□□□ 0.99
ACTB-210ENST00000477812 FAM71AQ8IYT1 594 aa21.24■□□□□ 0.99
ACTB-210ENST00000477812 RBBP8NLQ8NC74 664 aaPredicted RBP21.24■□□□□ 0.99
ACTB-210ENST00000477812 MYCBPAPQ8TBZ2 947 aa21.24■□□□□ 0.99
ACTB-210ENST00000477812 BAP1Q92560 729 aa21.24■□□□□ 0.99
ACTB-210ENST00000477812 TMEM176AQ96HP8 235 aa21.24■□□□□ 0.99
ACTB-210ENST00000477812 TRIM5Q9C035 493 aa21.24■□□□□ 0.99
ACTB-210ENST00000477812 CRISPLD1Q9H336 500 aa21.24■□□□□ 0.99
ACTB-210ENST00000477812 AFF4Q9UHB7 1163 aaKnown RBP21.24■□□□□ 0.99
ACTB-210ENST00000477812 FBXW11Q9UKB1 542 aa21.24■□□□□ 0.99
ACTB-210ENST00000477812 GTF3C4Q9UKN8 822 aa21.24■□□□□ 0.99
ACTB-210ENST00000477812 HCFC2Q9Y5Z7 792 aa21.24■□□□□ 0.99
ACTB-210ENST00000477812 MTMR11A4FU01 709 aa21.23■□□□□ 0.99
ACTB-210ENST00000477812 FOXN3O00409 490 aaPredicted RBP21.23■□□□□ 0.99
ACTB-210ENST00000477812 GLP2RO95838 553 aa21.23■□□□□ 0.99
ACTB-210ENST00000477812 GLUD1P00367 558 aa21.23■□□□□ 0.99
ACTB-210ENST00000477812 ATF2P15336 505 aa21.23■□□□□ 0.99
ACTB-210ENST00000477812 EPCAMP16422 314 aa21.23■□□□□ 0.99
ACTB-210ENST00000477812 RBM10P98175 930 aaKnown RBP21.23■□□□□ 0.99
ACTB-210ENST00000477812 RAPGEF1Q13905 1077 aa21.23■□□□□ 0.99
ACTB-210ENST00000477812 MDH1BQ5I0G3 518 aa21.23■□□□□ 0.99
ACTB-210ENST00000477812 PPFIBP1Q86W92 1011 aa21.23■□□□□ 0.99
ACTB-210ENST00000477812 PALB2Q86YC2 1186 aa21.23■□□□□ 0.99
ACTB-210ENST00000477812 DCP1BQ8IZD4 617 aaKnown RBP21.23■□□□□ 0.99
ACTB-210ENST00000477812 C12orf29Q8N999 325 aa21.23■□□□□ 0.99
ACTB-210ENST00000477812 PPP2R3CQ969Q6 453 aa21.23■□□□□ 0.99
ACTB-210ENST00000477812 MYLPFQ96A32 169 aa21.23■□□□□ 0.99
ACTB-210ENST00000477812 PCED1BQ96HM7 432 aa21.23■□□□□ 0.99
ACTB-210ENST00000477812 PGLYRP2Q96PD5 576 aa21.23■□□□□ 0.99
ACTB-210ENST00000477812 NLRC4Q9NPP4 1024 aa21.23■□□□□ 0.99
ACTB-210ENST00000477812 PAEPP09466 180 aa21.22■□□□□ 0.99
ACTB-210ENST00000477812 FOSL2P15408 326 aa21.22■□□□□ 0.99
ACTB-210ENST00000477812 TRIM21P19474 475 aaKnown RBP21.22■□□□□ 0.99
ACTB-210ENST00000477812 SMARCB1Q12824 385 aa21.22■□□□□ 0.99
ACTB-210ENST00000477812 MAPRE1Q15691 268 aaKnown RBP21.22■□□□□ 0.99
ACTB-210ENST00000477812 NFE2Q16621 373 aaPredicted RBP21.22■□□□□ 0.99
ACTB-210ENST00000477812 PAQR9Q6ZVX9 377 aa21.22■□□□□ 0.99
ACTB-210ENST00000477812 FUKQ8N0W3 1084 aa21.22■□□□□ 0.99
ACTB-210ENST00000477812 EFHBQ8N7U6 833 aa21.22■□□□□ 0.99
ACTB-210ENST00000477812 ATAD1Q8NBU5 361 aa21.22■□□□□ 0.99
ACTB-210ENST00000477812 MRFAP1L1Q96HT8 127 aa21.22■□□□□ 0.99
ACTB-210ENST00000477812 ZSWIM1Q9BR11 485 aa21.22■□□□□ 0.99
ACTB-210ENST00000477812 B3GNT5Q9BYG0 378 aa21.22■□□□□ 0.99
ACTB-210ENST00000477812 EDEM3Q9BZQ6 932 aa21.22■□□□□ 0.99
ACTB-210ENST00000477812 ABCB6Q9NP58 842 aa21.22■□□□□ 0.99
ACTB-210ENST00000477812 MAFFQ9ULX9 164 aa21.22■□□□□ 0.99
ACTB-210ENST00000477812 EYSQ5T1H1 3165 aa21.22■□□□□ 0.99
ACTB-210ENST00000477812 PTPRDP23468 1912 aa21.21■□□□□ 0.99
ACTB-210ENST00000477812 SEC24AO95486 1093 aa21.21■□□□□ 0.99
ACTB-210ENST00000477812 GYPCP04921 128 aa21.21■□□□□ 0.99
ACTB-210ENST00000477812 KRT5P13647 590 aa21.21■□□□□ 0.99
ACTB-210ENST00000477812 CDR1P51861 262 aa21.21■□□□□ 0.99
ACTB-210ENST00000477812 CTC1Q2NKJ3 1217 aa21.21■□□□□ 0.99
ACTB-210ENST00000477812 CFAP221Q4G0U5 840 aa21.21■□□□□ 0.99
ACTB-210ENST00000477812 SPECC1LQ69YQ0 1117 aa21.21■□□□□ 0.99
ACTB-210ENST00000477812 TMEM184AQ6ZMB5 413 aa21.21■□□□□ 0.99
ACTB-210ENST00000477812 TCEAL8Q8IYN2 117 aa21.21■□□□□ 0.99
ACTB-210ENST00000477812 TTC9BQ8N6N2 239 aa21.21■□□□□ 0.99
ACTB-210ENST00000477812 C2orf15Q8WU43 125 aaKnown RBP21.21■□□□□ 0.99
ACTB-210ENST00000477812 TFAP2BQ92481 460 aa21.21■□□□□ 0.99
ACTB-210ENST00000477812 FUBP3Q96I24 572 aaKnown RBP eCLIP21.21■□□□□ 0.99
ACTB-210ENST00000477812 NUP58Q9BVL2 599 aa21.21■□□□□ 0.99
ACTB-210ENST00000477812 HSFX1Q9UBD0 423 aa21.21■□□□□ 0.99
ACTB-210ENST00000477812 A0A1W2PQJ5 194 aa21.2■□□□□ 0.98
ACTB-210ENST00000477812 LINC01565O15544 149 aa21.2■□□□□ 0.98
ACTB-210ENST00000477812 CYP26A1O43174 497 aa21.2■□□□□ 0.98
ACTB-210ENST00000477812 CALCAP01258 141 aa21.2■□□□□ 0.98
ACTB-210ENST00000477812 SPATA31D3P0C874 917 aa21.2■□□□□ 0.98
ACTB-210ENST00000477812 CCDC130P13994 396 aa21.2■□□□□ 0.98
ACTB-210ENST00000477812 CLCN1P35523 988 aa21.2■□□□□ 0.98
ACTB-210ENST00000477812 SOX5P35711 763 aa21.2■□□□□ 0.98
ACTB-210ENST00000477812 ADCY1Q08828 1119 aa21.2■□□□□ 0.98
ACTB-210ENST00000477812 ARHGAP17Q68EM7 881 aa21.2■□□□□ 0.98
ACTB-210ENST00000477812 SPATA31D4Q6ZUB0 917 aa21.2■□□□□ 0.98
ACTB-210ENST00000477812 KREMEN2Q8NCW0 462 aa21.2■□□□□ 0.98
ACTB-210ENST00000477812 SPPL2BQ8TCT7 592 aa21.2■□□□□ 0.98
ACTB-210ENST00000477812 HNRNPABQ99729 332 aaKnown RBP21.2■□□□□ 0.98
ACTB-210ENST00000477812 RHOBTB2Q9BYZ6 727 aa21.2■□□□□ 0.98
ACTB-210ENST00000477812 ZNF518BQ9C0D4 1074 aa21.2■□□□□ 0.98
ACTB-210ENST00000477812 ACP6Q9NPH0 428 aa21.2■□□□□ 0.98
ACTB-210ENST00000477812 FAM49BQ9NUQ9 324 aa21.2■□□□□ 0.98
ACTB-210ENST00000477812 TMEM30AQ9NV96 361 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms