RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 TBCCD1Q9NVR7 557 aa5.63□□□□□ -1.51
SMNDC1-205ENST00000477763 SUV39H1O43463 412 aa5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 RHOBTB3O94955 611 aa5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 ZFPL1O95159 310 aa5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 UNC5CO95185 931 aa5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 IL18RAPO95256 599 aa5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 FDXRP22570 491 aa5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 TM4SF4P48230 202 aa5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 PRIM2P49643 509 aa5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 RPS7P62081 194 aaKnown RBP5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 GEN1Q17RS7 908 aa5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 FAM160B1Q5W0V3 765 aa5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 TAPT1Q6NXT6 567 aa5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 VRK3Q8IV63 474 aa5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 POC1BQ8TC44 478 aa5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 NMD3Q96D46 503 aaKnown RBP5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 MSLNLQ96KJ4 702 aa5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 TRIB1Q96RU8 372 aa5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 SMOQ99835 787 aa5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 TINAGL1Q9GZM7 467 aaPredicted RBP5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 TOR3AQ9H497 397 aa5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 VSX1Q9NZR4 365 aaPredicted RBP5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 TMX2Q9Y320 296 aa5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 WDR33Q9C0J8 1336 aaKnown RBP5.62□□□□□ -1.51
SMNDC1-205ENST00000477763 RASA4BC9J798 803 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 M0QYG6 137 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 KPNA5O15131 536 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 RASA4O43374 803 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 MAST3O60307 1309 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 RAMP2O60895 175 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 SOAT2O75908 522 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 SUN1O94901 812 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 GRPP07492 148 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 ITGAMP11215 1152 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 XRCC6P12956 609 aaKnown RBP eCLIP5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 CASP5P51878 434 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 BTKQ06187 659 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 ZNF543Q08ER8 600 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 CTBP1Q13363 440 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 DYRK1AQ13627 763 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 HLXQ14774 488 aaPredicted RBP5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 LONRF3Q496Y0 759 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 CRB2Q5IJ48 1285 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 SPATA31A3Q5VYP0 1347 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 PCSK4Q6UW60 755 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 TOGARAM2Q6ZUX3 1019 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 PPP1R32Q7Z5V6 425 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 SESTD1Q86VW0 696 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 LNX2Q8N448 690 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 ZC3H10Q96K80 434 aaKnown RBP5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 MOGAT1Q96PD6 335 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 MRIQ9BWK5 157 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 A1CFQ9NQ94 594 aaKnown RBP5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 STARD7Q9NQZ5 370 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 ETAA1Q9NY74 926 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 PACSIN3Q9UKS6 424 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 PADI4Q9UM07 663 aa5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.61□□□□□ -1.51
SMNDC1-205ENST00000477763 TRGV11A0A075B6L2 103 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 TRIM43BA6NCK2 446 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 POLRMTO00411 1230 aaKnown RBP5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 DNAJB5O75953 348 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 KIF20AO95235 890 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 LDHAP00338 332 aaKnown RBP5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 GCP02774 474 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 PARP1P09874 1014 aaKnown RBP5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 PIM1P11309 404 aaPredicted RBP5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 CYP2C9P11712 490 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 STT3AP46977 705 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 FPGSQ05932 587 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 DAG1Q14118 895 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 C3orf38Q5JPI3 329 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 HECTD2Q5U5R9 776 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 MPP5Q8N3R9 675 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 SDR16C5Q8N3Y7 309 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 SLC15A4Q8N697 577 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 DNAJC5GQ8N7S2 189 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 SUPT20HQ8NEM7 779 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 DEPTORQ8TB45 409 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 SLC9A6Q92581 669 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 TRIM43Q96BQ3 446 aaPredicted RBP5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 CHFRQ96EP1 664 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 LRIG1Q96JA1 1093 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 RIPOR3Q96MK2 946 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 TTPALQ9BTX7 342 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 BRIP1Q9BX63 1249 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 SMURF2Q9HAU4 748 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 SERHLQ9NQF3 203 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 INTS13Q9NVM9 706 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 STK32BQ9NY57 414 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 COL20A1Q9P218 1284 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 TESQ9UGI8 421 aaKnown RBP5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 AGAP1Q9UPQ3 857 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 DMTF1Q9Y222 760 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 DAAM1Q9Y4D1 1078 aa5.6□□□□□ -1.51
SMNDC1-205ENST00000477763 A0A087X1B8 175 aa5.59□□□□□ -1.51
SMNDC1-205ENST00000477763 POM121BA6NF01 834 aa5.59□□□□□ -1.51
SMNDC1-205ENST00000477763 TPD52L2O43399 206 aaKnown RBP5.59□□□□□ -1.51
SMNDC1-205ENST00000477763 ESRRBO95718 433 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms