RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 NBNO60934 754 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 CXCL10P02778 98 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 LMO2P25791 158 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 FAM43BQ6ZT52 329 aaPredicted RBP12.87□□□□□ -0.35
PRPF39-203ENST00000477626 ANKRD33Q7Z3H0 272 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 PDCL2Q8N4E4 241 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 PAAF1Q9BRP4 392 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 KIAA1257Q9ULG3 409 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 SIGLEC16A6NMB1 481 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 ARVCFO00192 962 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 GJB6O95452 261 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 GLI1P08151 1106 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 SSTR3P32745 418 aaPredicted RBP12.87□□□□□ -0.35
PRPF39-203ENST00000477626 PDCLQ13371 301 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 RPS6KA1Q15418 735 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 GLE1Q53GS7 698 aaKnown RBP12.87□□□□□ -0.35
PRPF39-203ENST00000477626 PPP1R26Q5T8A7 1209 aaPredicted RBP12.87□□□□□ -0.35
PRPF39-203ENST00000477626 TTC27Q6P3X3 843 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 SCARA5Q6ZMJ2 495 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 C12orf29Q8N999 325 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 CENPIQ92674 756 aaPredicted RBP12.87□□□□□ -0.35
PRPF39-203ENST00000477626 LPIN3Q9BQK8 851 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 SEZ6LQ9BYH1 1024 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 TRPV6Q9H1D0 765 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 WBP1LQ9NX94 342 aa12.87□□□□□ -0.35
PRPF39-203ENST00000477626 CHD5Q8TDI0 1954 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 DPYSL4O14531 572 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 THAP12O43422 761 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 HOXD10P28358 340 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 CD52P31358 61 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 SLC1A1P43005 524 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 GLRA4Q5JXX5 417 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 CLLU1OSQ5K130 101 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 DAB2IPQ5VWQ8 1189 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 PASD1Q8IV76 773 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 KATNAL2Q8IYT4 538 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 TTC39CQ8N584 583 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 PRELID2Q8N945 189 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 SPATA18Q8TC71 538 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 NT5C3BQ969T7 300 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 TSPYL2Q9H2G4 693 aaPredicted RBP12.86□□□□□ -0.35
PRPF39-203ENST00000477626 CD58P19256 250 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 GRK4P32298 578 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 ORC1Q13415 861 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 LRRC38Q5VT99 294 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 CAPZA3Q96KX2 299 aa12.86□□□□□ -0.35
PRPF39-203ENST00000477626 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.86□□□□□ -0.35
PRPF39-203ENST00000477626 TRPC3Q13507 836 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 PLEKHG4Q58EX7 1191 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 RAB41Q5JT25 222 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 TXNRD3NBQ6F5E7 133 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 DPH6Q7L8W6 267 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 PEX26Q7Z412 305 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 FEZF2Q8TBJ5 459 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 CYLDQ9NQC7 956 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 PCYOX1Q9UHG3 505 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 LAMA3Q16787 3333 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 KPNA7A9QM74 516 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 PSTPIP1O43586 416 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 SCNN1AP37088 669 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 BRD3Q15059 726 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 TRADDQ15628 312 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 CFAP221Q4G0U5 840 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 CCNI2Q6ZMN8 369 aaPredicted RBP12.85□□□□□ -0.35
PRPF39-203ENST00000477626 RNF180Q86T96 592 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 ECHDC2Q86YB7 292 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 RNPC3Q96LT9 517 aaKnown RBP12.85□□□□□ -0.35
PRPF39-203ENST00000477626 UNC93B1Q9H1C4 597 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 KLK14Q9P0G3 267 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 AMFRQ9UKV5 643 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 A0A0U1RQG5 324 aaPredicted RBP12.85□□□□□ -0.35
PRPF39-203ENST00000477626 TMEM189-UBE2V1I3L0A0 370 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 GPR182O15218 404 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 PHACTR2O75167 634 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 PLA2G4AP47712 749 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 ADCY2Q08462 1091 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 CBLBQ13191 982 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 PMF1Q6P1K2 205 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 FAM171BQ6P995 826 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 JOSD2Q8TAC2 188 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 FAM212AQ96EL1 285 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 PSMB7Q99436 277 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 PARVAQ9NVD7 372 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.85□□□□□ -0.35
PRPF39-203ENST00000477626 CACNG4Q9UBN1 327 aa12.85□□□□□ -0.35
PRPF39-203ENST00000477626 CHD7Q9P2D1 2997 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 CCDC66A2RUB6 948 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 KCNK3O14649 394 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 RPS6KA5O75582 802 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 CLSTN1O94985 981 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 IL1R2P27930 398 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 MLH1P40692 756 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 PNPLA4P41247 253 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 YWHAEP62258 255 aaKnown RBP12.84□□□□□ -0.35
PRPF39-203ENST00000477626 ZNF268Q14587 947 aaPredicted RBP12.84□□□□□ -0.35
PRPF39-203ENST00000477626 APBB1IPQ7Z5R6 666 aaPredicted RBP12.84□□□□□ -0.35
PRPF39-203ENST00000477626 BEST2Q8NFU1 509 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 CSNK1G1Q9HCP0 422 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 C2CD4BA6NLJ0 364 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 CALB1P05937 261 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms