RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 ELMOD1Q8N336 334 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.01□□□□□ -0.17
TOP3A-205ENST00000477508 MYCBPAPQ8TBZ2 947 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 JAKMIP2Q96AA8 810 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 SYT15Q9BQS2 421 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 NDST4Q9H3R1 872 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 PIDD1Q9HB75 910 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 APOBEC3GQ9HC16 384 aaKnown RBP14.01□□□□□ -0.17
TOP3A-205ENST00000477508 XIRP2A4UGR9 3374 aa14.01□□□□□ -0.17
TOP3A-205ENST00000477508 SPTBN5Q9NRC6 3674 aaKnown RBP14□□□□□ -0.17
TOP3A-205ENST00000477508 RFPL2O75678 378 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 PDGFRBP09619 1106 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 WEE2P0C1S8 567 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 PTPN1P18031 435 aaKnown RBP14□□□□□ -0.17
TOP3A-205ENST00000477508 CDK11BP21127 795 aaKnown RBP14□□□□□ -0.17
TOP3A-205ENST00000477508 ACAT1P24752 427 aaKnown RBP14□□□□□ -0.17
TOP3A-205ENST00000477508 TPM4P67936 248 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 DUSP4Q13115 394 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 CUL2Q13617 745 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 NCAPHQ15003 741 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 SMAD2Q15796 467 aaKnown RBP14□□□□□ -0.17
TOP3A-205ENST00000477508 CLUL1Q15846 466 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 EXOC3L4Q17RC7 722 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 CFAP221Q4G0U5 840 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 LRRTM3Q86VH5 581 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 SPATA2LQ8IUW3 424 aaPredicted RBP14□□□□□ -0.17
TOP3A-205ENST00000477508 CRYBG2Q8N1P7 616 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 AOPEPQ8N6M6 819 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 C12orf76Q8N812 135 aaPredicted RBP14□□□□□ -0.17
TOP3A-205ENST00000477508 B3GALNT2Q8NCR0 500 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 LMO3Q8TAP4 145 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 SUSD6Q92537 303 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 SMG7Q92540 1137 aaKnown RBP14□□□□□ -0.17
TOP3A-205ENST00000477508 PGLYRP2Q96PD5 576 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 TMEM209Q96SK2 561 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 PKMYT1Q99640 499 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 NT5C1AQ9BXI3 368 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 SDCBP2Q9H190 292 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 GCNT4Q9P109 453 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 GTF3C4Q9UKN8 822 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 USP15Q9Y4E8 981 aaPredicted RBP14□□□□□ -0.17
TOP3A-205ENST00000477508 ASB3Q9Y575 518 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 INSL5Q9Y5Q6 135 aa14□□□□□ -0.17
TOP3A-205ENST00000477508 CUL9Q8IWT3 2517 aa13.99□□□□□ -0.17
TOP3A-205ENST00000477508 ATP8B3O60423 1300 aa13.99□□□□□ -0.17
TOP3A-205ENST00000477508 MYBPHLA2RUH7 354 aa13.99□□□□□ -0.17
TOP3A-205ENST00000477508 LRRC10BA6NIK2 292 aa13.99□□□□□ -0.17
TOP3A-205ENST00000477508 PES1O00541 588 aaKnown RBP13.99□□□□□ -0.17
TOP3A-205ENST00000477508 SEC24AO95486 1093 aa13.99□□□□□ -0.17
TOP3A-205ENST00000477508 ZNF18P17022 549 aa13.99□□□□□ -0.17
TOP3A-205ENST00000477508 RAP1GAPP47736 663 aa13.99□□□□□ -0.17
TOP3A-205ENST00000477508 NDST1P52848 882 aa13.99□□□□□ -0.17
TOP3A-205ENST00000477508 EPHB3P54753 998 aa13.99□□□□□ -0.17
TOP3A-205ENST00000477508 RPL10AP62906 217 aaKnown RBP13.99□□□□□ -0.17
TOP3A-205ENST00000477508 GCNT1Q02742 428 aa13.99□□□□□ -0.17
TOP3A-205ENST00000477508 CBX2Q14781 532 aaPredicted RBP13.99□□□□□ -0.17
TOP3A-205ENST00000477508 HSP90AA4PQ58FG1 418 aa13.99□□□□□ -0.17
TOP3A-205ENST00000477508 IQCEQ6IPM2 695 aa13.99□□□□□ -0.17
TOP3A-205ENST00000477508 VSTM1Q6UX27 236 aa13.99□□□□□ -0.17
TOP3A-205ENST00000477508 ENOSF1Q7L5Y1 443 aa13.99□□□□□ -0.17
TOP3A-205ENST00000477508 ATAD1Q8NBU5 361 aa13.99□□□□□ -0.17
TOP3A-205ENST00000477508 TATDN2Q93075 761 aa13.99□□□□□ -0.17
TOP3A-205ENST00000477508 CEP295NLQ96MC4 621 aa13.99□□□□□ -0.17
TOP3A-205ENST00000477508 INTS2Q9H0H0 1204 aaKnown RBP13.99□□□□□ -0.17
TOP3A-205ENST00000477508 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.99□□□□□ -0.176e-9■■■■■ 134.6
TOP3A-205ENST00000477508 CISHQ9NSE2 258 aa13.99□□□□□ -0.17
TOP3A-205ENST00000477508 ABI2Q9NYB9 513 aaPredicted RBP13.99□□□□□ -0.17
TOP3A-205ENST00000477508 PRKAG3Q9UGI9 489 aa13.99□□□□□ -0.17
TOP3A-205ENST00000477508 LIMA1Q9UHB6 759 aaKnown RBP13.99□□□□□ -0.17
TOP3A-205ENST00000477508 ATP2C2O75185 946 aa13.98□□□□□ -0.17
TOP3A-205ENST00000477508 LRRN2O75325 713 aa13.98□□□□□ -0.17
TOP3A-205ENST00000477508 CILPO75339 1184 aa13.98□□□□□ -0.17
TOP3A-205ENST00000477508 VNN2O95498 520 aa13.98□□□□□ -0.17
TOP3A-205ENST00000477508 HAPLN1P10915 354 aaPredicted RBP13.98□□□□□ -0.17
TOP3A-205ENST00000477508 MAGEA11P43364 429 aa13.98□□□□□ -0.17
TOP3A-205ENST00000477508 PSMC1P62191 440 aaKnown RBP13.98□□□□□ -0.17
TOP3A-205ENST00000477508 VEPH1Q14D04 833 aa13.98□□□□□ -0.17
TOP3A-205ENST00000477508 KRT31Q15323 416 aa13.98□□□□□ -0.17
TOP3A-205ENST00000477508 MGAT5BQ3V5L5 792 aa13.98□□□□□ -0.17
TOP3A-205ENST00000477508 TJAP1Q5JTD0 557 aa13.98□□□□□ -0.17
TOP3A-205ENST00000477508 MIIPQ5JXC2 388 aa13.98□□□□□ -0.17
TOP3A-205ENST00000477508 FKBP15Q5T1M5 1219 aa13.98□□□□□ -0.17
TOP3A-205ENST00000477508 ITIH5Q86UX2 942 aa13.98□□□□□ -0.17
TOP3A-205ENST00000477508 DHX40Q8IX18 779 aaKnown RBP13.98□□□□□ -0.17
TOP3A-205ENST00000477508 PPM1KQ8N3J5 372 aa13.98□□□□□ -0.17
TOP3A-205ENST00000477508 LEMD2Q8NC56 503 aa13.98□□□□□ -0.17
TOP3A-205ENST00000477508 ELMO3Q96BJ8 720 aa13.98□□□□□ -0.17
TOP3A-205ENST00000477508 ZNF707Q96C28 371 aaPredicted RBP13.98□□□□□ -0.17
TOP3A-205ENST00000477508 ZNF512Q96ME7 567 aaPredicted RBP13.98□□□□□ -0.17
TOP3A-205ENST00000477508 APOL5Q9BWW9 433 aa13.98□□□□□ -0.17
TOP3A-205ENST00000477508 ELOVL4Q9GZR5 314 aa13.98□□□□□ -0.17
TOP3A-205ENST00000477508 CRTAC1Q9NQ79 661 aa13.98□□□□□ -0.17
TOP3A-205ENST00000477508 YIPF1Q9Y548 306 aa13.98□□□□□ -0.17
TOP3A-205ENST00000477508 GOLGA6L19H0YKK7 550 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 CCL16O15467 120 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 BMP1P13497 986 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 PTPN2P17706 415 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 CD58P19256 250 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 CYP27A1Q02318 531 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 TWF1Q12792 350 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms