RNA–Protein interactions for RNA: ENST00000477448.1

SOBP-202, Transcript of sine oculis binding protein homolog, humanhuman

TSL 5

Gene SOBP, Length 1,535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOBP-202ENST00000477448 ZNF606Q8WXB4 792 aa27.54■■■□□ 2
SOBP-202ENST00000477448 ZSWIM1Q9BR11 485 aa27.54■■■□□ 2
SOBP-202ENST00000477448 PUF60Q9UHX1 559 aaKnown RBP27.54■■■□□ 2
SOBP-202ENST00000477448 DSEQ9UL01 958 aa27.54■■■□□ 2
SOBP-202ENST00000477448 NENFQ9UMX5 172 aa27.54■■■□□ 2
SOBP-202ENST00000477448 REXO2Q9Y3B8 237 aaKnown RBP27.54■■■□□ 2
SOBP-202ENST00000477448 NT5C1B-RDH14C9J2C7 533 aa27.53■■■□□ 2
SOBP-202ENST00000477448 TRAPPC3O43617 180 aa27.53■■■□□ 2
SOBP-202ENST00000477448 TYMPP19971 482 aa27.53■■■□□ 2
SOBP-202ENST00000477448 BRD2P25440 801 aaKnown RBP27.53■■■□□ 2
SOBP-202ENST00000477448 CTNNB1P35222 781 aa27.53■■■□□ 2
SOBP-202ENST00000477448 BMPR1AP36894 532 aa27.53■■■□□ 2
SOBP-202ENST00000477448 LHX1P48742 406 aa27.53■■■□□ 2
SOBP-202ENST00000477448 ALDH7A1P49419 539 aaKnown RBP27.53■■■□□ 2
SOBP-202ENST00000477448 GPM6BQ13491 265 aa27.53■■■□□ 2
SOBP-202ENST00000477448 TMEM173Q86WV6 379 aaPredicted RBP27.53■■■□□ 2
SOBP-202ENST00000477448 TFAP2BQ92481 460 aa27.53■■■□□ 2
SOBP-202ENST00000477448 CLP1Q92989 425 aaKnown RBP27.53■■■□□ 2
SOBP-202ENST00000477448 SAMD11Q96NU1 681 aa27.53■■■□□ 2
SOBP-202ENST00000477448 H3BNC9 293 aa27.52■■■□□ 2
SOBP-202ENST00000477448 CD19P15391 556 aa27.52■■■□□ 2
SOBP-202ENST00000477448 CYP27A1Q02318 531 aa27.52■■■□□ 2
SOBP-202ENST00000477448 PALB2Q86YC2 1186 aa27.52■■■□□ 2
SOBP-202ENST00000477448 PCDHB18PQ96TA0 734 aa27.52■■■□□ 2
SOBP-202ENST00000477448 DPEP3Q9H4B8 488 aa27.52■■■□□ 2
SOBP-202ENST00000477448 SEPT11Q9NVA2 429 aaKnown RBP27.52■■■□□ 2
SOBP-202ENST00000477448 DDX43Q9NXZ2 648 aaKnown RBP27.52■■■□□ 2
SOBP-202ENST00000477448 NAGPAQ9UK23 515 aa27.52■■■□□ 2
SOBP-202ENST00000477448 NLRC5Q86WI3 1866 aa27.52■■■□□ 2
SOBP-202ENST00000477448 MYH10P35580 1976 aa27.52■■■□□ 2
SOBP-202ENST00000477448 IPO7O95373 1038 aaKnown RBP27.51■■■□□ 2
SOBP-202ENST00000477448 PDGFRBP09619 1106 aa27.51■■■□□ 2
SOBP-202ENST00000477448 VDRP11473 427 aa27.51■■■□□ 2
SOBP-202ENST00000477448 SPOUT1Q5T280 376 aaKnown RBP27.51■■■□□ 2
SOBP-202ENST00000477448 ACOT1Q86TX2 421 aa27.51■■■□□ 2
SOBP-202ENST00000477448 METTL23Q86XA0 190 aa27.51■■■□□ 2
SOBP-202ENST00000477448 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.51■■■□□ 2
SOBP-202ENST00000477448 CRYBG2Q8N1P7 616 aa27.51■■■□□ 2
SOBP-202ENST00000477448 BCL7CQ8WUZ0 217 aaPredicted RBP27.51■■■□□ 2
SOBP-202ENST00000477448 HEXIM2Q96MH2 286 aaKnown RBP27.51■■■□□ 2
SOBP-202ENST00000477448 KIAA1257Q9ULG3 409 aa27.51■■■□□ 2
SOBP-202ENST00000477448 CCDC175P0C221 793 aa27.51■■□□□ 1.99
SOBP-202ENST00000477448 SPA17Q15506 151 aa27.51■■□□□ 1.99
SOBP-202ENST00000477448 FUT10Q6P4F1 479 aa27.51■■□□□ 1.99
SOBP-202ENST00000477448 KCNT2Q6UVM3 1135 aa27.51■■□□□ 1.99
SOBP-202ENST00000477448 GPR62Q9BZJ7 368 aa27.51■■□□□ 1.99
SOBP-202ENST00000477448 PPP2R2CQ9Y2T4 447 aa27.51■■□□□ 1.99
SOBP-202ENST00000477448 SF3B1O75533 1304 aaKnown RBP eCLIP27.51■■□□□ 1.99
SOBP-202ENST00000477448 A0A0C4DFX4 3053 aa27.5■■□□□ 1.99
SOBP-202ENST00000477448 SYN3O14994 580 aa27.5■■□□□ 1.99
SOBP-202ENST00000477448 CFHP08603 1231 aa27.5■■□□□ 1.99
SOBP-202ENST00000477448 LAG3P18627 525 aa27.5■■□□□ 1.99
SOBP-202ENST00000477448 KRT83P78385 493 aa27.5■■□□□ 1.99
SOBP-202ENST00000477448 SGO2Q562F6 1265 aa27.5■■□□□ 1.99
SOBP-202ENST00000477448 ALKBH5Q6P6C2 394 aaKnown RBP27.5■■□□□ 1.99
SOBP-202ENST00000477448 C12orf29Q8N999 325 aa27.5■■□□□ 1.99
SOBP-202ENST00000477448 TNIP3Q96KP6 325 aa27.5■■□□□ 1.99
SOBP-202ENST00000477448 ZNF558Q96NG5 402 aa27.5■■□□□ 1.99
SOBP-202ENST00000477448 RTP3Q9BQQ7 232 aa27.5■■□□□ 1.99
SOBP-202ENST00000477448 DNAI2Q9GZS0 605 aa27.5■■□□□ 1.99
SOBP-202ENST00000477448 PCDHGC3Q9UN70 934 aa27.5■■□□□ 1.99
SOBP-202ENST00000477448 XIRP2A4UGR9 3374 aa27.49■■□□□ 1.99
SOBP-202ENST00000477448 C5orf67F2Z3F1 127 aa27.49■■□□□ 1.99
SOBP-202ENST00000477448 MED7O43513 233 aa27.49■■□□□ 1.99
SOBP-202ENST00000477448 TKTP29401 623 aaKnown RBP27.49■■□□□ 1.99
SOBP-202ENST00000477448 ELAVL2Q12926 359 aaKnown RBP27.49■■□□□ 1.99
SOBP-202ENST00000477448 CCDC122Q5T0U0 273 aa27.49■■□□□ 1.99
SOBP-202ENST00000477448 OVOS1Q6IE37 1185 aa27.49■■□□□ 1.99
SOBP-202ENST00000477448 COLGALT1Q8NBJ5 622 aa27.49■■□□□ 1.99
SOBP-202ENST00000477448 IGSF21Q96ID5 467 aa27.49■■□□□ 1.99
SOBP-202ENST00000477448 KCND1Q9NSA2 647 aa27.49■■□□□ 1.99
SOBP-202ENST00000477448 CARNS1A5YM72 827 aa27.48■■□□□ 1.99
SOBP-202ENST00000477448 GRM6O15303 877 aa27.48■■□□□ 1.99
SOBP-202ENST00000477448 CSPG5O95196 566 aa27.48■■□□□ 1.99
SOBP-202ENST00000477448 EFEMP2O95967 443 aa27.48■■□□□ 1.99
SOBP-202ENST00000477448 ACAT1P24752 427 aaKnown RBP27.48■■□□□ 1.99
SOBP-202ENST00000477448 SSTR3P32745 418 aaPredicted RBP27.48■■□□□ 1.99
SOBP-202ENST00000477448 YWHAHQ04917 246 aaPredicted RBP27.48■■□□□ 1.99
SOBP-202ENST00000477448 FAM171A1Q5VUB5 890 aa27.48■■□□□ 1.99
SOBP-202ENST00000477448 KIAA0319Q5VV43 1072 aa27.48■■□□□ 1.99
SOBP-202ENST00000477448 TRIM72Q6ZMU5 477 aa27.48■■□□□ 1.99
SOBP-202ENST00000477448 CCAR2Q8N163 923 aaKnown RBP27.48■■□□□ 1.99
SOBP-202ENST00000477448 C17orf53Q8N3J3 647 aaPredicted RBP27.48■■□□□ 1.99
SOBP-202ENST00000477448 PDCL3Q9H2J4 239 aa27.48■■□□□ 1.99
SOBP-202ENST00000477448 ALG13Q9NP73 1137 aaKnown RBP27.48■■□□□ 1.99
SOBP-202ENST00000477448 PCDHA13Q9Y5I0 950 aa27.48■■□□□ 1.99
SOBP-202ENST00000477448 O00370 1275 aa27.47■■□□□ 1.99
SOBP-202ENST00000477448 CYP1A1P04798 512 aaPredicted RBP27.47■■□□□ 1.99
SOBP-202ENST00000477448 FGFR3P22607 806 aa27.47■■□□□ 1.99
SOBP-202ENST00000477448 SKIV2LQ15477 1246 aaKnown RBP27.47■■□□□ 1.99
SOBP-202ENST00000477448 CNGA2Q16280 664 aa27.47■■□□□ 1.99
SOBP-202ENST00000477448 SLC39A11Q8N1S5 342 aa27.47■■□□□ 1.99
SOBP-202ENST00000477448 B3GALNT2Q8NCR0 500 aa27.47■■□□□ 1.99
SOBP-202ENST00000477448 LPIN3Q9BQK8 851 aa27.47■■□□□ 1.99
SOBP-202ENST00000477448 TAS2R14Q9NYV8 317 aa27.47■■□□□ 1.99
SOBP-202ENST00000477448 LMCD1Q9NZU5 365 aa27.47■■□□□ 1.99
SOBP-202ENST00000477448 CDH9Q9ULB4 789 aa27.47■■□□□ 1.99
SOBP-202ENST00000477448 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.47■■□□□ 1.99
SOBP-202ENST00000477448 PTPRDP23468 1912 aa27.47■■□□□ 1.99
SOBP-202ENST00000477448 USP27XA6NNY8 438 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms