RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 GRM5P41594 1212 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 AFF1P51825 1210 aaKnown RBP12.45□□□□□ -0.42
LSM2-212ENST00000477182 TPM4P67936 248 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 RING1Q06587 406 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 SNRNP35Q16560 246 aaKnown RBP12.45□□□□□ -0.42
LSM2-212ENST00000477182 CCDC40Q4G0X9 1142 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 CDKAL1Q5VV42 579 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 FAM114A1Q8IWE2 563 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 NPAS3Q8IXF0 933 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 SMG8Q8ND04 991 aaKnown RBP12.45□□□□□ -0.42
LSM2-212ENST00000477182 ITFG1Q8TB96 612 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 LOXL4Q96JB6 756 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 MKNK1Q9BUB5 465 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 LMAN1LQ9HAT1 526 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 KIAA1586Q9HCI6 787 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 SNTG2Q9NY99 539 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 GDE1Q9NZC3 331 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 MAGEC2Q9UBF1 373 aaPredicted RBP12.45□□□□□ -0.42
LSM2-212ENST00000477182 FBXW11Q9UKB1 542 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 CPSF3Q9UKF6 684 aaKnown RBP12.45□□□□□ -0.42
LSM2-212ENST00000477182 POLIQ9UNA4 740 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 IPPQ9Y573 584 aa12.45□□□□□ -0.42
LSM2-212ENST00000477182 SHISA7A6NL88 538 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 CHURC1-FNTBB4DL54 471 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 KCNJ18B7U540 433 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 GNA14O95837 355 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 C8AP07357 584 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 CLTAP09496 248 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 CXCL8P10145 99 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 ATP1A3P13637 1013 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 ZNF18P17022 549 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 CDK11BP21127 795 aaKnown RBP12.44□□□□□ -0.42
LSM2-212ENST00000477182 MTIF2P46199 727 aaKnown RBP12.44□□□□□ -0.42
LSM2-212ENST00000477182 FNTBP49356 437 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 CYP24A1Q07973 514 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 DSC1Q08554 894 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 KCNJ12Q14500 433 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 HSP90AA2PQ14568 343 aaPredicted RBP12.44□□□□□ -0.42
LSM2-212ENST00000477182 SF3A2Q15428 464 aaKnown RBP12.44□□□□□ -0.42
LSM2-212ENST00000477182 ENOX2Q16206 610 aaKnown RBP12.44□□□□□ -0.42
LSM2-212ENST00000477182 KYAT1Q16773 422 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 PSAPL1Q6NUJ1 521 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 FUT10Q6P4F1 479 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 BRSK2Q8IWQ3 736 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 SPEM1Q8N4L4 309 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 FAM3CQ92520 227 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 ELSPBP1Q96BH3 223 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 FAM212AQ96EL1 285 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 ACAP3Q96P50 834 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 CCDC94Q9BW85 323 aaPredicted RBP12.44□□□□□ -0.42
LSM2-212ENST00000477182 ADAM33Q9BZ11 813 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 RNF39Q9H2S5 420 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 RPF1Q9H9Y2 349 aaKnown RBP12.44□□□□□ -0.42
LSM2-212ENST00000477182 RXFP3Q9NSD7 469 aa12.44□□□□□ -0.42
LSM2-212ENST00000477182 RBAKQ9NYW8 714 aaPredicted RBP12.44□□□□□ -0.42
LSM2-212ENST00000477182 GCN1Q92616 2671 aaKnown RBP12.43□□□□□ -0.42
LSM2-212ENST00000477182 MAPK13O15264 365 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 CCL16O15467 120 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 MEFVO15553 781 aaPredicted RBP12.43□□□□□ -0.42
LSM2-212ENST00000477182 RECQL4O94761 1208 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 PAPSS2O95340 614 aaPredicted RBP12.43□□□□□ -0.42
LSM2-212ENST00000477182 ITGA4P13612 1032 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 KRT13P13646 458 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 RPL17P18621 184 aaKnown RBP12.43□□□□□ -0.42
LSM2-212ENST00000477182 AKAP5P24588 427 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 WNT7BP56706 349 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 SATB1Q01826 763 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 UVSSAQ2YD98 709 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 PABPC1LQ4VXU2 614 aaKnown RBP12.43□□□□□ -0.42
LSM2-212ENST00000477182 TCP11X2Q5H9J9 407 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 RTL10Q7L3V2 364 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 HACE1Q8IYU2 909 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 PLEKHO2Q8TD55 490 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 IRF7Q92985 503 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 CCDC127Q96BQ5 260 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 ARRDC1-AS1Q9H2J1 176 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 BRD9Q9H8M2 597 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 METTL14Q9HCE5 456 aaKnown RBP12.43□□□□□ -0.42
LSM2-212ENST00000477182 PDE11AQ9HCR9 933 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 TRPV5Q9NQA5 729 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 KLK14Q9P0G3 267 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 PARP2Q9UGN5 583 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 ARMCX3Q9UH62 379 aaPredicted RBP12.43□□□□□ -0.42
LSM2-212ENST00000477182 SPAG17Q6Q759 2223 aa12.43□□□□□ -0.42
LSM2-212ENST00000477182 TAF4O00268 1085 aa12.42□□□□□ -0.42
LSM2-212ENST00000477182 AXIN1O15169 862 aa12.42□□□□□ -0.42
LSM2-212ENST00000477182 TRIM49P0CI25 452 aa12.42□□□□□ -0.42
LSM2-212ENST00000477182 TRIM49CP0CI26 452 aa12.42□□□□□ -0.42
LSM2-212ENST00000477182 EEF1GP26641 437 aaKnown RBP12.42□□□□□ -0.42
LSM2-212ENST00000477182 YARSP54577 528 aaKnown RBP12.42□□□□□ -0.42
LSM2-212ENST00000477182 MARSP56192 900 aaKnown RBP12.42□□□□□ -0.42
LSM2-212ENST00000477182 SPAG1Q07617 926 aa12.42□□□□□ -0.42
LSM2-212ENST00000477182 BFSP1Q12934 665 aa12.42□□□□□ -0.42
LSM2-212ENST00000477182 FOXC1Q12948 553 aa12.42□□□□□ -0.42
LSM2-212ENST00000477182 SRSF5Q13243 272 aaKnown RBP12.42□□□□□ -0.42
LSM2-212ENST00000477182 PSMD6Q15008 389 aa12.42□□□□□ -0.42
LSM2-212ENST00000477182 KRT31Q15323 416 aa12.42□□□□□ -0.42
LSM2-212ENST00000477182 SLC10A6Q3KNW5 377 aa12.42□□□□□ -0.42
LSM2-212ENST00000477182 TCERG1LQ5VWI1 586 aa12.42□□□□□ -0.42
LSM2-212ENST00000477182 C1orf228Q6PIY5 440 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms