RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ECI2O75521 394 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 SP9P0CG40 484 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 MCF2P10911 925 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 ERCC5P28715 1186 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-214ENST00000477152 RAD51AP2Q09MP3 1159 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 GAS6Q14393 721 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 UBXN2BQ14CS0 331 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 DTHD1Q6ZMT9 781 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 SV2AQ7L0J3 742 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 PMEPA1Q969W9 287 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 MSANTD3Q96H12 275 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 CDK5RAP3Q96JB5 506 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 ZNF512Q96ME7 567 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-214ENST00000477152 TSPAN18Q96SJ8 248 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 CCDC113Q9H0I3 377 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 BHMT2Q9H2M3 363 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 SUV39H2Q9H5I1 410 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 KCND2Q9NZV8 630 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 KLF15Q9UIH9 416 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 RAB23Q9ULC3 237 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 PCDHGA2Q9Y5H1 932 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 MYH11P35749 1972 aa7.92□□□□□ -1.14
BRCA1-214ENST00000477152 FBXO24O75426 580 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 DCNP07585 359 aaKnown RBP7.91□□□□□ -1.14
BRCA1-214ENST00000477152 PRPHP41219 470 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 MATR3P43243 847 aaKnown RBP eCLIP7.91□□□□□ -1.14
BRCA1-214ENST00000477152 CLCNKBP51801 687 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 GPC5P78333 572 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 ATP11AP98196 1134 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 PLAURQ03405 335 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 SNW1Q13573 536 aaKnown RBP7.91□□□□□ -1.14
BRCA1-214ENST00000477152 PUM1Q14671 1186 aaKnown RBP eCLIP7.91□□□□□ -1.14
BRCA1-214ENST00000477152 UPP1Q16831 310 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 ZNF280DQ6N043 979 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 PARM1Q6UWI2 310 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 ADAMTSL4Q6UY14 1074 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 PDZD4Q76G19 769 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-214ENST00000477152 CEP120Q8N960 986 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 FBXO18Q8NFZ0 1043 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 RABGGTAQ92696 567 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 IRF7Q92985 503 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 ELSPBP1Q96BH3 223 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 PPP1R10Q96QC0 940 aaKnown RBP7.91□□□□□ -1.14
BRCA1-214ENST00000477152 TMEM60Q9H2L4 133 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 ZFP14Q9HCL3 533 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 DDX19AQ9NUU7 478 aaKnown RBP7.91□□□□□ -1.14
BRCA1-214ENST00000477152 NCDNQ9UBB6 729 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 TRIP11Q15643 1979 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 SMIM28A0A1B0GU29 152 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 FAM170BA6NMN3 283 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 F8W810 466 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 PODXLO00592 558 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 SLC26A4O43511 780 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 JAK2O60674 1132 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 MAP3K6O95382 1288 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 FGF19O95750 216 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 EDN3P14138 238 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 GLULP15104 373 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 ATF2P15336 505 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 MCM4P33991 863 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 RPS9P46781 194 aaKnown RBP7.91□□□□□ -1.14
BRCA1-214ENST00000477152 PEX3P56589 373 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 GUCY1B3Q02153 619 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 CTXN3Q4LDR2 81 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 ZNF394Q53GI3 561 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 SLC8B1Q6J4K2 584 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 MPZL3Q6UWV2 235 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 DGLUCYQ7Z3D6 616 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 CCDC83Q8IWF9 413 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 DEPDC1BQ8WUY9 529 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 FGF14Q92915 247 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 TCF12Q99081 682 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 ACO2Q99798 780 aaKnown RBP7.91□□□□□ -1.14
BRCA1-214ENST00000477152 PAAF1Q9BRP4 392 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 BRD9Q9H8M2 597 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 PLEKHA5Q9HAU0 1116 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 CYP4F11Q9HBI6 524 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 PCDHGB7Q9Y5F8 929 aa7.91□□□□□ -1.14
BRCA1-214ENST00000477152 A0A087WWV3 80 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 VWA8A3KMH1 1905 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 PRR5-ARHGAP8B1AHC4 643 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 TBC1D4O60343 1298 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 CACNA1HO95180 2353 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 RHOP08100 348 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 BMP4P12644 408 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 KCNE1P15382 129 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 GRIA4P48058 902 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 ARHGAP8P85298 464 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 NT5DC1Q5TFE4 455 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 USP37Q86T82 979 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 NPAS3Q8IXF0 933 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 YAF2Q8IY57 180 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 FANCMQ8IYD8 2048 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 TCEAL8Q8IYN2 117 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 C3orf58Q8NDZ4 430 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 DDX23Q9BUQ8 820 aaKnown RBP7.9□□□□□ -1.14
BRCA1-214ENST00000477152 TRMT61BQ9BVS5 477 aaKnown RBP7.9□□□□□ -1.14
BRCA1-214ENST00000477152 LTB4R2Q9NPC1 389 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 ZSCAN32Q9NX65 697 aa7.9□□□□□ -1.14
BRCA1-214ENST00000477152 LARSQ9P2J5 1176 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms