RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 FUT10Q6P4F1 479 aa18.85■□□□□ 0.61
SREBF1-211ENST00000476994 SCARA5Q6ZMJ2 495 aa18.85■□□□□ 0.61
SREBF1-211ENST00000476994 CCDC150Q8NCX0 1101 aa18.85■□□□□ 0.61
SREBF1-211ENST00000476994 SHC3Q92529 594 aa18.85■□□□□ 0.61
SREBF1-211ENST00000476994 PDLIM2Q96JY6 352 aa18.85■□□□□ 0.61
SREBF1-211ENST00000476994 PCMTD1Q96MG8 357 aaPredicted RBP18.85■□□□□ 0.61
SREBF1-211ENST00000476994 NUP58Q9BVL2 599 aa18.85■□□□□ 0.61
SREBF1-211ENST00000476994 EDEM3Q9BZQ6 932 aa18.85■□□□□ 0.61
SREBF1-211ENST00000476994 CYP3A43Q9HB55 503 aa18.85■□□□□ 0.61
SREBF1-211ENST00000476994 CNTN6Q9UQ52 1028 aa18.85■□□□□ 0.61
SREBF1-211ENST00000476994 R3HCC1Q9Y3T6 440 aaKnown RBP18.85■□□□□ 0.61
SREBF1-211ENST00000476994 KMT2EQ8IZD2 1858 aa18.85■□□□□ 0.61
SREBF1-211ENST00000476994 ZDBF2Q9HCK1 2354 aa18.85■□□□□ 0.61
SREBF1-211ENST00000476994 CYB561D2O14569 222 aa18.84■□□□□ 0.61
SREBF1-211ENST00000476994 TACC1O75410 805 aa18.84■□□□□ 0.61
SREBF1-211ENST00000476994 TRIM21P19474 475 aaKnown RBP18.84■□□□□ 0.61
SREBF1-211ENST00000476994 CDH8P55286 799 aa18.84■□□□□ 0.61
SREBF1-211ENST00000476994 TNNC1P63316 161 aa18.84■□□□□ 0.61
SREBF1-211ENST00000476994 INCA1Q0VD86 236 aa18.84■□□□□ 0.61
SREBF1-211ENST00000476994 MTMR3Q13615 1198 aa18.84■□□□□ 0.61
SREBF1-211ENST00000476994 RARS2Q5T160 578 aaKnown RBP18.84■□□□□ 0.61
SREBF1-211ENST00000476994 SMYD5Q6GMV2 418 aa18.84■□□□□ 0.61
SREBF1-211ENST00000476994 ELMSAN1Q6PJG2 1045 aa18.84■□□□□ 0.61
SREBF1-211ENST00000476994 ENOSF1Q7L5Y1 443 aa18.84■□□□□ 0.61
SREBF1-211ENST00000476994 DPH6Q7L8W6 267 aa18.84■□□□□ 0.61
SREBF1-211ENST00000476994 OSTM1Q86WC4 334 aa18.84■□□□□ 0.61
SREBF1-211ENST00000476994 PDCL2Q8N4E4 241 aa18.84■□□□□ 0.61
SREBF1-211ENST00000476994 WHAMMQ8TF30 809 aa18.84■□□□□ 0.61
SREBF1-211ENST00000476994 JAKMIP2Q96AA8 810 aa18.84■□□□□ 0.61
SREBF1-211ENST00000476994 IQCDQ96DY2 449 aa18.84■□□□□ 0.61
SREBF1-211ENST00000476994 MRPL45Q9BRJ2 306 aaKnown RBP18.84■□□□□ 0.61
SREBF1-211ENST00000476994 FAM124BQ9H5Z6 455 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-211ENST00000476994 NLRC4Q9NPP4 1024 aa18.84■□□□□ 0.61
SREBF1-211ENST00000476994 CAPN11Q9UMQ6 739 aa18.84■□□□□ 0.61
SREBF1-211ENST00000476994 PCDHB8Q9UN66 801 aa18.84■□□□□ 0.61
SREBF1-211ENST00000476994 SSX2IPQ9Y2D8 614 aa18.84■□□□□ 0.61
SREBF1-211ENST00000476994 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.84■□□□□ 0.615e-12■■■□□ 14.7
SREBF1-211ENST00000476994 GABRDO14764 452 aa18.83■□□□□ 0.6
SREBF1-211ENST00000476994 WEE2P0C1S8 567 aa18.83■□□□□ 0.6
SREBF1-211ENST00000476994 FAM163BP0C2L3 166 aa18.83■□□□□ 0.6
SREBF1-211ENST00000476994 P4HA1P13674 534 aa18.83■□□□□ 0.6
SREBF1-211ENST00000476994 TYMPP19971 482 aa18.83■□□□□ 0.6
SREBF1-211ENST00000476994 FGFR3P22607 806 aa18.83■□□□□ 0.6
SREBF1-211ENST00000476994 ARID5BQ14865 1188 aa18.83■□□□□ 0.6
SREBF1-211ENST00000476994 DRAP1Q14919 205 aaPredicted RBP18.83■□□□□ 0.6
SREBF1-211ENST00000476994 WSCD1Q658N2 575 aa18.83■□□□□ 0.6
SREBF1-211ENST00000476994 E4F1Q66K89 784 aaPredicted RBP18.83■□□□□ 0.6
SREBF1-211ENST00000476994 UBALD2Q8IYN6 164 aa18.83■□□□□ 0.6
SREBF1-211ENST00000476994 PLCD3Q8N3E9 789 aa18.83■□□□□ 0.6
SREBF1-211ENST00000476994 TDRD5Q8NAT2 981 aaKnown RBP18.83■□□□□ 0.6
SREBF1-211ENST00000476994 AUTS2Q8WXX7 1259 aa18.83■□□□□ 0.6
SREBF1-211ENST00000476994 FAM81BQ96LP2 452 aa18.83■□□□□ 0.6
SREBF1-211ENST00000476994 STK33Q9BYT3 514 aa18.83■□□□□ 0.6
SREBF1-211ENST00000476994 IRF2BPLQ9H1B7 796 aa18.83■□□□□ 0.6
SREBF1-211ENST00000476994 POMKQ9H5K3 350 aa18.83■□□□□ 0.6
SREBF1-211ENST00000476994 SORCS3Q9UPU3 1222 aa18.83■□□□□ 0.6
SREBF1-211ENST00000476994 SF3B1O75533 1304 aaKnown RBP eCLIP18.82■□□□□ 0.64e-6■■■■■ 86.9
SREBF1-211ENST00000476994 F8VZ95 297 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 SYN3O14994 580 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 TADA2AO75478 443 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 PNMA6AP0CW24 399 aaPredicted RBP18.82■□□□□ 0.6
SREBF1-211ENST00000476994 ODC1P11926 461 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 WARSP23381 471 aaKnown RBP18.82■□□□□ 0.6
SREBF1-211ENST00000476994 KLRC2P26717 231 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 TKTP29401 623 aaKnown RBP18.82■□□□□ 0.6
SREBF1-211ENST00000476994 CASP14P31944 242 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 ZNF132P52740 706 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 MFAP3P55082 362 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 TRIM14Q14142 442 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 MRPL58Q14197 206 aaKnown RBP18.82■□□□□ 0.6
SREBF1-211ENST00000476994 ARHGAP44Q17R89 818 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 KIAA1841Q6NSI8 718 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 PDXDC1Q6P996 788 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 DSTYKQ6XUX3 929 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 TAS1R1Q7RTX1 841 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 APPL2Q8NEU8 664 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 SPATA18Q8TC71 538 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 TWNKQ96RR1 684 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 RTP3Q9BQQ7 232 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 MRPL17Q9NRX2 175 aaKnown RBP18.82■□□□□ 0.6
SREBF1-211ENST00000476994 CISHQ9NSE2 258 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 HMGXB4Q9UGU5 601 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 DPP7Q9UHL4 492 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 MYO6Q9UM54 1294 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 MTCL1Q9Y4B5 1905 aaKnown RBP18.82■□□□□ 0.6
SREBF1-211ENST00000476994 PLXNA3P51805 1871 aa18.82■□□□□ 0.6
SREBF1-211ENST00000476994 FOXN3O00409 490 aaPredicted RBP18.81■□□□□ 0.6
SREBF1-211ENST00000476994 HCRTO43612 131 aa18.81■□□□□ 0.6
SREBF1-211ENST00000476994 HUS1O60921 280 aa18.81■□□□□ 0.6
SREBF1-211ENST00000476994 CILPO75339 1184 aa18.81■□□□□ 0.6
SREBF1-211ENST00000476994 URODP06132 367 aa18.81■□□□□ 0.6
SREBF1-211ENST00000476994 ELAVL2Q12926 359 aaKnown RBP18.81■□□□□ 0.6
SREBF1-211ENST00000476994 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.81■□□□□ 0.6
SREBF1-211ENST00000476994 FAM71AQ8IYT1 594 aa18.81■□□□□ 0.6
SREBF1-211ENST00000476994 ADGRF2Q8IZF7 708 aa18.81■□□□□ 0.6
SREBF1-211ENST00000476994 TMEM86AQ8N2M4 240 aa18.81■□□□□ 0.6
SREBF1-211ENST00000476994 KREMEN2Q8NCW0 462 aa18.81■□□□□ 0.6
SREBF1-211ENST00000476994 ACSF2Q96CM8 615 aaPredicted RBP18.81■□□□□ 0.6
SREBF1-211ENST00000476994 MMS19Q96T76 1030 aa18.81■□□□□ 0.6
SREBF1-211ENST00000476994 HERC2P3Q9BVR0 1158 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms