RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 PDE8AO60658 829 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 FAM58BPP0C7Q3 252 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 SRGAP2CP0DJJ0 459 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 SRGAP2BP0DMP2 458 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 PHBP35232 272 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 STT3AP46977 705 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 CASP5P51878 434 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 DYNLL1P63167 89 aaKnown RBP14.49□□□□□ -0.09
HDAC1-206ENST00000476391 CLEC4GQ6UXB4 293 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 ZNF564Q8TBZ8 553 aaPredicted RBP14.49□□□□□ -0.09
HDAC1-206ENST00000476391 DCUN1D1Q96GG9 259 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 NLRP4Q96MN2 994 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 HEPHQ9BQS7 1158 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 CCDC106Q9BWC9 280 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 KLC2Q9H0B6 622 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 TMOD2Q9NZR1 351 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 SORCS3Q9UPU3 1222 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 INPP5FQ9Y2H2 1132 aa14.49□□□□□ -0.09
HDAC1-206ENST00000476391 H3BNX3 289 aa14.48□□□□□ -0.09
HDAC1-206ENST00000476391 CYP26A1O43174 497 aa14.48□□□□□ -0.09
HDAC1-206ENST00000476391 TDP2O95551 362 aa14.48□□□□□ -0.09
HDAC1-206ENST00000476391 OXSR1O95747 527 aaPredicted RBP14.48□□□□□ -0.09
HDAC1-206ENST00000476391 KRT18P05783 430 aaKnown RBP14.48□□□□□ -0.09
HDAC1-206ENST00000476391 OCM2P0CE71 109 aa14.48□□□□□ -0.09
HDAC1-206ENST00000476391 OCMP0CE72 109 aaPredicted RBP14.48□□□□□ -0.09
HDAC1-206ENST00000476391 RAG1P15918 1043 aa14.48□□□□□ -0.09
HDAC1-206ENST00000476391 HOXD13P35453 343 aa14.48□□□□□ -0.09
HDAC1-206ENST00000476391 ALDH1A3P47895 512 aa14.48□□□□□ -0.09
HDAC1-206ENST00000476391 CASP4P49662 377 aa14.48□□□□□ -0.09
HDAC1-206ENST00000476391 CNGA3Q16281 694 aa14.48□□□□□ -0.09
HDAC1-206ENST00000476391 KIF6Q6ZMV9 814 aa14.48□□□□□ -0.09
HDAC1-206ENST00000476391 PRPF39Q86UA1 669 aaKnown RBP14.48□□□□□ -0.09
HDAC1-206ENST00000476391 ATP6V0A1Q93050 837 aa14.48□□□□□ -0.09
HDAC1-206ENST00000476391 VPS37BQ9H9H4 285 aa14.48□□□□□ -0.09
HDAC1-206ENST00000476391 C6orf203Q9P0P8 240 aaPredicted RBP14.48□□□□□ -0.09
HDAC1-206ENST00000476391 GIT1Q9Y2X7 761 aa14.48□□□□□ -0.09
HDAC1-206ENST00000476391 SQORQ9Y6N5 450 aa14.48□□□□□ -0.09
HDAC1-206ENST00000476391 NFASCO94856 1347 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 E9PMD0 336 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 BAIAP3O94812 1187 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 GZMAP12544 262 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 ZNF23P17027 643 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 SERPINB6P35237 376 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 FMO5P49326 533 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 CACNB1Q02641 598 aaPredicted RBP14.47□□□□□ -0.09
HDAC1-206ENST00000476391 BMT2Q1RMZ1 405 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 DCDC5Q6ZRR9 648 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 TMEM126BQ8IUX1 230 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 LZTR1Q8N653 840 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 TTC13Q8NBP0 860 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 BORCS5Q969J3 196 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 VTI1AQ96AJ9 217 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 SLC17A7Q9P2U7 560 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 DOLKQ9UPQ8 538 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 SPTLC1O15269 473 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 CRTAMO95727 393 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 RBP3P10745 1247 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 THRAP10827 490 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 BTKQ06187 659 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 CCNG2Q16589 344 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 SBK1Q52WX2 424 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 PGM2L1Q6PCE3 622 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 ADGRD1Q6QNK2 874 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 CATSPER1Q8NEC5 780 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 PPP4R1Q8TF05 950 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 ZHX3Q9H4I2 956 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 IGSF9Q9P2J2 1179 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 AP4B1Q9Y6B7 739 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 KCPQ6ZWJ8 1503 aa14.47□□□□□ -0.09
HDAC1-206ENST00000476391 ASTN1O14525 1302 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 F5H6K3 240 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 ALOX15BO15296 676 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 LRRN2O75325 713 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 POLR2MP0CAP2 368 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 AOC1P19801 751 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 KLRC2P26717 231 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 ETV4P43268 484 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 ARPC4P59998 168 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 PDIA2Q13087 525 aaKnown RBP14.46□□□□□ -0.09
HDAC1-206ENST00000476391 ZNF829Q3KNS6 432 aaPredicted RBP14.46□□□□□ -0.09
HDAC1-206ENST00000476391 RABGAP1LQ5R372 815 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 NIPAL1Q6NVV3 410 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 LPCAT2Q7L5N7 544 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 NLRP10Q86W26 655 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 RTKN2Q8IZC4 609 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 STARD8Q92502 1023 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 CEP95Q96GE4 821 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 NUP85Q9BW27 656 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 ZNF287Q9HBT7 754 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 APPL1Q9UKG1 709 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 KIAA1024Q9UPX6 916 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 CTDP1Q9Y5B0 961 aaPredicted RBP14.46□□□□□ -0.09
HDAC1-206ENST00000476391 PCDHB13Q9Y5F0 798 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 SNAP23O00161 211 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 NDUFB5O43674 189 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 CYP1A2P05177 515 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 EIF2S1P05198 315 aaKnown RBP14.46□□□□□ -0.09
HDAC1-206ENST00000476391 SERPINA6P08185 405 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 CYP2C9P11712 490 aa14.46□□□□□ -0.09
HDAC1-206ENST00000476391 ADSSP30520 456 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms