RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 OR5B17Q8NGF7 314 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 EPS8L1Q8TE68 723 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 PPP4R1Q8TF05 950 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 PIK3R5Q8WYR1 880 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 MARK4Q96L34 752 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 NAP1L4Q99733 375 aaKnown RBP5.24□□□□□ -1.57
CCDC39-204ENST00000476379 LPIN3Q9BQK8 851 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 ADPGKQ9BRR6 497 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 MED10Q9BTT4 135 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 KCND1Q9NSA2 647 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 SUCLA2Q9P2R7 463 aaPredicted RBP5.24□□□□□ -1.57
CCDC39-204ENST00000476379 HEY2Q9UBP5 337 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 NUDT5Q9UKK9 219 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 PCDHGC5Q9Y5F6 944 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 UBE4BO95155 1302 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 PEX1O43933 1283 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 BNIP3LO60238 219 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 CIB2O75838 187 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 USP1O94782 785 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 SLC8A1P32418 973 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 CIITAP33076 1130 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 RARRES1P49788 294 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 COG7P83436 770 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 DRP2Q13474 957 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 AUHQ13825 339 aaKnown RBP5.24□□□□□ -1.57
CCDC39-204ENST00000476379 SEPT6Q14141 434 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 RCN1Q15293 331 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 HIF1AQ16665 826 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 C15orf59Q2T9L4 293 aaPredicted RBP5.24□□□□□ -1.57
CCDC39-204ENST00000476379 TSNAXIP1Q2TAA8 658 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 EDRF1Q3B7T1 1238 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 SH2D4BQ5SQS7 431 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 ACTL9Q8TC94 416 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 NDRG1Q92597 394 aaKnown RBP5.24□□□□□ -1.57
CCDC39-204ENST00000476379 BHMTQ93088 406 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 KREMEN1Q96MU8 473 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 RUNDC3BQ96NL0 473 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 GBP5Q96PP8 586 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 FAM129AQ9BZQ8 928 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 MYLK2Q9H1R3 596 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 IL1RL2Q9HB29 575 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 AIPL1Q9NZN9 384 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 FAM8A1Q9UBU6 413 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 AKAP11Q9UKA4 1901 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 CACNA1FO60840 1977 aa5.24□□□□□ -1.57
CCDC39-204ENST00000476379 PODXLO00592 558 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 COPEO14579 308 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 KIAA0391O15091 583 aaKnown RBP5.23□□□□□ -1.57
CCDC39-204ENST00000476379 CTCFP49711 727 aaPredicted RBP5.23□□□□□ -1.57
CCDC39-204ENST00000476379 EIF3EP60228 445 aaKnown RBP5.23□□□□□ -1.57
CCDC39-204ENST00000476379 BEX3Q00994 111 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 OTUD4Q01804 1114 aaKnown RBP5.23□□□□□ -1.57
CCDC39-204ENST00000476379 AP1B1Q10567 949 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 TKFCQ3LXA3 575 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 MYLK4Q86YV6 388 aaPredicted RBP5.23□□□□□ -1.57
CCDC39-204ENST00000476379 TEX2Q8IWB9 1127 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 ANKRD13AQ8IZ07 590 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 DAGLBQ8NCG7 672 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 FBXO36Q8NEA4 188 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 DEPDC1BQ8WUY9 529 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 DCAF4Q8WV16 495 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 CAPNS2Q96L46 248 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 IDI2Q9BXS1 227 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 ATXN3LQ9H3M9 355 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 XPO7Q9UIA9 1087 aaKnown RBP5.23□□□□□ -1.57
CCDC39-204ENST00000476379 TBX20Q9UMR3 447 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 TIMM13Q9Y5L4 95 aaPredicted RBP5.23□□□□□ -1.57
CCDC39-204ENST00000476379 SNX9Q9Y5X1 595 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 SPTBN5Q9NRC6 3674 aaKnown RBP5.23□□□□□ -1.57
CCDC39-204ENST00000476379 B2RBV5 119 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 HAUS5O94927 633 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 TNNC2P02585 160 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 VTNP04004 478 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 CD48P09326 243 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 KRT3P12035 628 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 MX2P20592 715 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 ARFIP2P53365 341 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 ELF3P78545 371 aaPredicted RBP5.23□□□□□ -1.57
CCDC39-204ENST00000476379 IL1RL1Q01638 556 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 POU5F1BQ06416 359 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 ZRSR2Q15696 482 aaKnown RBP5.23□□□□□ -1.57
CCDC39-204ENST00000476379 LY6KQ17RY6 165 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 RABGAP1LQ5R372 815 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 TMEM154Q6P9G4 183 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 C4orf50Q6ZRC1 276 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 CENPUQ71F23 418 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 TTC7BQ86TV6 843 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 GPD1LQ8N335 351 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 PNPLA1Q8N8W4 532 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 HASPINQ8TF76 798 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 BSNDQ8WZ55 320 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 ATP6V0A1Q93050 837 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 PPWD1Q96BP3 646 aaKnown RBP5.23□□□□□ -1.57
CCDC39-204ENST00000476379 MXRA8Q9BRK3 442 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 MTA3Q9BTC8 594 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 GLT8D2Q9H1C3 349 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 CNOT10Q9H9A5 744 aaKnown RBP5.23□□□□□ -1.57
CCDC39-204ENST00000476379 MAN1C1Q9NR34 630 aa5.23□□□□□ -1.57
CCDC39-204ENST00000476379 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.23□□□□□ -1.57
CCDC39-204ENST00000476379 NINJ2Q9NZG7 142 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms