RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 FOXD2O60548 495 aaPredicted RBP13.38□□□□□ -0.27
CCDC57-208ENST00000475635 IL18RAPO95256 599 aa13.38□□□□□ -0.27
CCDC57-208ENST00000475635 F11P03951 625 aa13.38□□□□□ -0.27
CCDC57-208ENST00000475635 HMGA1P17096 107 aaKnown RBP13.38□□□□□ -0.27
CCDC57-208ENST00000475635 DDX6P26196 483 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCDC57-208ENST00000475635 ADSSP30520 456 aa13.38□□□□□ -0.27
CCDC57-208ENST00000475635 DDIT3P35638 169 aa13.38□□□□□ -0.27
CCDC57-208ENST00000475635 PXNP49023 591 aaPredicted RBP13.38□□□□□ -0.27
CCDC57-208ENST00000475635 GPR15P49685 360 aa13.38□□□□□ -0.27
CCDC57-208ENST00000475635 TSPY1Q01534 308 aa13.38□□□□□ -0.27
CCDC57-208ENST00000475635 POU5F1Q01860 360 aaKnown RBP13.38□□□□□ -0.27
CCDC57-208ENST00000475635 GRSF1Q12849 480 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCDC57-208ENST00000475635 BFSP1Q12934 665 aa13.38□□□□□ -0.27
CCDC57-208ENST00000475635 RUNX3Q13761 415 aa13.38□□□□□ -0.27
CCDC57-208ENST00000475635 SF3A1Q15459 793 aaKnown RBP13.38□□□□□ -0.27
CCDC57-208ENST00000475635 TMEM196Q5HYL7 178 aa13.38□□□□□ -0.27
CCDC57-208ENST00000475635 FSTL4Q6MZW2 842 aa13.38□□□□□ -0.27
CCDC57-208ENST00000475635 DYMQ7RTS9 669 aa13.38□□□□□ -0.27
CCDC57-208ENST00000475635 ZNF720Q7Z2F6 126 aa13.38□□□□□ -0.27
CCDC57-208ENST00000475635 SFR1Q86XK3 245 aa13.38□□□□□ -0.27
CCDC57-208ENST00000475635 STKLD1Q8NE28 680 aa13.38□□□□□ -0.27
CCDC57-208ENST00000475635 USP13Q92995 863 aaPredicted RBP13.38□□□□□ -0.27
CCDC57-208ENST00000475635 ZNF560Q96MR9 790 aa13.38□□□□□ -0.27
CCDC57-208ENST00000475635 PI4K2AQ9BTU6 479 aa13.38□□□□□ -0.27
CCDC57-208ENST00000475635 TDP1Q9NUW8 608 aa13.38□□□□□ -0.27
CCDC57-208ENST00000475635 TMLHEQ9NVH6 421 aa13.38□□□□□ -0.27
CCDC57-208ENST00000475635 PCDHB5Q9Y5E4 795 aa13.38□□□□□ -0.27
CCDC57-208ENST00000475635 CEP192Q8TEP8 1941 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 USP24Q9UPU5 2620 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 AXIN1O15169 862 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 ATG13O75143 517 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 PRPF40AO75400 957 aaKnown RBP13.37□□□□□ -0.27
CCDC57-208ENST00000475635 RPP40O75818 363 aaKnown RBP13.37□□□□□ -0.27
CCDC57-208ENST00000475635 PPP1R37O75864 691 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 KRT37O76014 449 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 PNPLA4P41247 253 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 WNT7BP56706 349 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 POSTNQ15063 836 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 SDHAF4Q5VUM1 108 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 TXNDC8Q6A555 127 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 BRAPQ7Z569 592 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 NT5DC4Q86YG4 428 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 PDCL2Q8N4E4 241 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 GAB3Q8WWW8 586 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 HVCN1Q96D96 273 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 CHFRQ96EP1 664 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 EPSTI1Q96J88 318 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 FAM213AQ9BRX8 229 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 MRPL44Q9H9J2 332 aaKnown RBP13.37□□□□□ -0.27
CCDC57-208ENST00000475635 KIF9Q9HAQ2 790 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 MAGED2Q9UNF1 606 aaPredicted RBP13.37□□□□□ -0.27
CCDC57-208ENST00000475635 SLC8A2Q9UPR5 921 aa13.37□□□□□ -0.27
CCDC57-208ENST00000475635 SOBPA7XYQ1 873 aa13.36□□□□□ -0.27
CCDC57-208ENST00000475635 TRDMT1O14717 391 aaKnown RBP13.36□□□□□ -0.27
CCDC57-208ENST00000475635 CSH1P0DML2 217 aa13.36□□□□□ -0.27
CCDC57-208ENST00000475635 CSH2P0DML3 217 aa13.36□□□□□ -0.27
CCDC57-208ENST00000475635 CCDC192P0DO97 292 aa13.36□□□□□ -0.27
CCDC57-208ENST00000475635 ARSAP15289 507 aa13.36□□□□□ -0.27
CCDC57-208ENST00000475635 KCNA4P22459 653 aa13.36□□□□□ -0.27
CCDC57-208ENST00000475635 POLR2BP30876 1174 aaKnown RBP13.36□□□□□ -0.27
CCDC57-208ENST00000475635 TFAMQ00059 246 aaKnown RBP13.36□□□□□ -0.27
CCDC57-208ENST00000475635 AMPD2Q01433 879 aa13.36□□□□□ -0.27
CCDC57-208ENST00000475635 KCNA1Q09470 495 aa13.36□□□□□ -0.27
CCDC57-208ENST00000475635 CCDC6Q16204 474 aa13.36□□□□□ -0.27
CCDC57-208ENST00000475635 NFE2Q16621 373 aaPredicted RBP13.36□□□□□ -0.27
CCDC57-208ENST00000475635 AASDHQ4L235 1098 aaPredicted RBP13.36□□□□□ -0.27
CCDC57-208ENST00000475635 CC2D1AQ6P1N0 951 aaPredicted RBP13.36□□□□□ -0.27
CCDC57-208ENST00000475635 USP49Q70CQ1 688 aa13.36□□□□□ -0.27
CCDC57-208ENST00000475635 CACNA2D4Q7Z3S7 1137 aa13.36□□□□□ -0.27
CCDC57-208ENST00000475635 MON1AQ86VX9 555 aa13.36□□□□□ -0.27
CCDC57-208ENST00000475635 RIN3Q8TB24 985 aa13.36□□□□□ -0.27
CCDC57-208ENST00000475635 MRPS31Q92665 395 aaKnown RBP13.36□□□□□ -0.27
CCDC57-208ENST00000475635 SAAL1Q96ER3 474 aa13.36□□□□□ -0.27
CCDC57-208ENST00000475635 STRA6Q9BX79 667 aa13.36□□□□□ -0.27
CCDC57-208ENST00000475635 ARRDC1-AS1Q9H2J1 176 aa13.36□□□□□ -0.27
CCDC57-208ENST00000475635 DDX43Q9NXZ2 648 aaKnown RBP13.36□□□□□ -0.27
CCDC57-208ENST00000475635 TBC1D7Q9P0N9 293 aa13.36□□□□□ -0.27
CCDC57-208ENST00000475635 AGAP1Q9UPQ3 857 aa13.36□□□□□ -0.27
CCDC57-208ENST00000475635 EXOC7Q9UPT5 735 aa13.36□□□□□ -0.27
CCDC57-208ENST00000475635 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.36□□□□□ -0.27
CCDC57-208ENST00000475635 CCDC163A0A0D9SF12 145 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 HUS1O60921 280 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 RNF40O75150 1001 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 TADA3O75528 432 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 EPN2O95208 641 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 EGFP01133 1207 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 ITGB3P05106 788 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 ACAT1P24752 427 aaKnown RBP13.35□□□□□ -0.27
CCDC57-208ENST00000475635 CYP2F1P24903 491 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 RAP1GAPP47736 663 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 RPL10AP62906 217 aaKnown RBP13.35□□□□□ -0.27
CCDC57-208ENST00000475635 ZNF268Q14587 947 aaPredicted RBP13.35□□□□□ -0.27
CCDC57-208ENST00000475635 PDGFRLQ15198 375 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 SF3A2Q15428 464 aaKnown RBP13.35□□□□□ -0.27
CCDC57-208ENST00000475635 DDR2Q16832 855 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 INTS6LQ5JSJ4 861 aaKnown RBP13.35□□□□□ -0.27
CCDC57-208ENST00000475635 IL31Q6EBC2 164 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 KBTBD6Q86V97 674 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 BRSK2Q8IWQ3 736 aa13.35□□□□□ -0.27
CCDC57-208ENST00000475635 C1orf127Q8N9H9 656 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms