RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 EFCAB13Q8IY85 973 aa16.97■□□□□ 0.31
CDPF1-206ENST00000475605 SPPL2BQ8TCT7 592 aa16.97■□□□□ 0.31
CDPF1-206ENST00000475605 GAB3Q8WWW8 586 aa16.97■□□□□ 0.31
CDPF1-206ENST00000475605 RAD54LQ92698 747 aa16.97■□□□□ 0.31
CDPF1-206ENST00000475605 AK8Q96MA6 479 aa16.97■□□□□ 0.31
CDPF1-206ENST00000475605 ASB7Q9H672 318 aa16.97■□□□□ 0.31
CDPF1-206ENST00000475605 AGO2Q9UKV8 859 aaKnown RBP16.97■□□□□ 0.31
CDPF1-206ENST00000475605 C2CD2Q9Y426 696 aa16.97■□□□□ 0.31
CDPF1-206ENST00000475605 GREB1Q4ZG55 1949 aa16.97■□□□□ 0.31
CDPF1-206ENST00000475605 DENND4CQ5VZ89 1909 aa16.97■□□□□ 0.31
CDPF1-206ENST00000475605 MAP1BP46821 2468 aaKnown RBP16.96■□□□□ 0.31
CDPF1-206ENST00000475605 RPP40O75818 363 aaKnown RBP16.96■□□□□ 0.31
CDPF1-206ENST00000475605 SCP2P22307 547 aa16.96■□□□□ 0.31
CDPF1-206ENST00000475605 AVPR1AP37288 418 aa16.96■□□□□ 0.31
CDPF1-206ENST00000475605 SF3A1Q15459 793 aaKnown RBP16.96■□□□□ 0.31
CDPF1-206ENST00000475605 SCARA3Q6AZY7 606 aa16.96■□□□□ 0.31
CDPF1-206ENST00000475605 C2orf15Q8WU43 125 aaKnown RBP16.96■□□□□ 0.31
CDPF1-206ENST00000475605 CHAMP1Q96JM3 812 aa16.96■□□□□ 0.31
CDPF1-206ENST00000475605 ZNF396Q96N95 335 aaPredicted RBP16.96■□□□□ 0.31
CDPF1-206ENST00000475605 PI4K2AQ9BTU6 479 aa16.96■□□□□ 0.31
CDPF1-206ENST00000475605 SMOC1Q9H4F8 434 aa16.96■□□□□ 0.31
CDPF1-206ENST00000475605 MAGED2Q9UNF1 606 aaPredicted RBP16.96■□□□□ 0.31
CDPF1-206ENST00000475605 STYXL1Q9Y6J8 313 aa16.96■□□□□ 0.31
CDPF1-206ENST00000475605 EML5Q05BV3 1969 aa16.95■□□□□ 0.3
CDPF1-206ENST00000475605 OBSL1O75147 1896 aa16.95■□□□□ 0.3
CDPF1-206ENST00000475605 KPNA7A9QM74 516 aa16.95■□□□□ 0.3
CDPF1-206ENST00000475605 TRDMT1O14717 391 aaKnown RBP16.95■□□□□ 0.3
CDPF1-206ENST00000475605 TM4SF5O14894 197 aa16.95■□□□□ 0.3
CDPF1-206ENST00000475605 SLC26A4O43511 780 aa16.95■□□□□ 0.3
CDPF1-206ENST00000475605 RNF40O75150 1001 aa16.95■□□□□ 0.3
CDPF1-206ENST00000475605 TBCAO75347 108 aaKnown RBP16.95■□□□□ 0.3
CDPF1-206ENST00000475605 EPN2O95208 641 aa16.95■□□□□ 0.3
CDPF1-206ENST00000475605 ZNF806P0C7X5 589 aa16.95■□□□□ 0.3
CDPF1-206ENST00000475605 CCDC192P0DO97 292 aa16.95■□□□□ 0.3
CDPF1-206ENST00000475605 RAP1GAPP47736 663 aa16.95■□□□□ 0.3
CDPF1-206ENST00000475605 WNT7BP56706 349 aa16.95■□□□□ 0.3
CDPF1-206ENST00000475605 GRSF1Q12849 480 aaKnown RBP eCLIP16.95■□□□□ 0.3
CDPF1-206ENST00000475605 BFSP1Q12934 665 aa16.95■□□□□ 0.3
CDPF1-206ENST00000475605 PTPAQ15257 358 aa16.95■□□□□ 0.3
CDPF1-206ENST00000475605 IL31Q6EBC2 164 aa16.95■□□□□ 0.3
CDPF1-206ENST00000475605 CACNA2D4Q7Z3S7 1137 aa16.95■□□□□ 0.3
CDPF1-206ENST00000475605 C12orf50Q8NA57 414 aaPredicted RBP16.95■□□□□ 0.3
CDPF1-206ENST00000475605 CCSER1Q9C0I3 900 aa16.95■□□□□ 0.3
CDPF1-206ENST00000475605 TDP1Q9NUW8 608 aa16.95■□□□□ 0.3
CDPF1-206ENST00000475605 SLC8A2Q9UPR5 921 aa16.95■□□□□ 0.3
CDPF1-206ENST00000475605 PCDHB5Q9Y5E4 795 aa16.95■□□□□ 0.3
CDPF1-206ENST00000475605 ZNF638Q14966 1978 aaKnown RBP16.95■□□□□ 0.3
CDPF1-206ENST00000475605 SPAG17Q6Q759 2223 aa16.94■□□□□ 0.3
CDPF1-206ENST00000475605 TULP1O00294 542 aaPredicted RBP16.94■□□□□ 0.3
CDPF1-206ENST00000475605 FOXD2O60548 495 aaPredicted RBP16.94■□□□□ 0.3
CDPF1-206ENST00000475605 PRPF40AO75400 957 aaKnown RBP16.94■□□□□ 0.3
CDPF1-206ENST00000475605 ZSCAN22P10073 491 aaPredicted RBP16.94■□□□□ 0.3
CDPF1-206ENST00000475605 ADSSP30520 456 aa16.94■□□□□ 0.3
CDPF1-206ENST00000475605 GALK1P51570 392 aa16.94■□□□□ 0.3
CDPF1-206ENST00000475605 SMARCB1Q12824 385 aa16.94■□□□□ 0.3
CDPF1-206ENST00000475605 DDR2Q16832 855 aa16.94■□□□□ 0.3
CDPF1-206ENST00000475605 N4BP2L1Q5TBK1 243 aaPredicted RBP16.94■□□□□ 0.3
CDPF1-206ENST00000475605 FOXD4L5Q5VV16 416 aaPredicted RBP16.94■□□□□ 0.3
CDPF1-206ENST00000475605 SLFN12LQ6IEE8 588 aa16.94■□□□□ 0.3
CDPF1-206ENST00000475605 DCP1BQ8IZD4 617 aaKnown RBP16.94■□□□□ 0.3
CDPF1-206ENST00000475605 ZSWIM2Q8NEG5 633 aa16.94■□□□□ 0.3
CDPF1-206ENST00000475605 RASSF8Q8NHQ8 419 aa16.94■□□□□ 0.3
CDPF1-206ENST00000475605 FOXD4L4Q8WXT5 416 aaPredicted RBP16.94■□□□□ 0.3
CDPF1-206ENST00000475605 LARP4BQ92615 738 aaKnown RBP16.94■□□□□ 0.3
CDPF1-206ENST00000475605 LOXL4Q96JB6 756 aa16.94■□□□□ 0.3
CDPF1-206ENST00000475605 FAM84AQ96KN4 292 aa16.94■□□□□ 0.3
CDPF1-206ENST00000475605 CCDC163A0A0D9SF12 145 aa16.93■□□□□ 0.3
CDPF1-206ENST00000475605 TADA3O75528 432 aa16.93■□□□□ 0.3
CDPF1-206ENST00000475605 ACAT1P24752 427 aaKnown RBP16.93■□□□□ 0.3
CDPF1-206ENST00000475605 LIMK1P53667 647 aa16.93■□□□□ 0.3
CDPF1-206ENST00000475605 CEBPZQ03701 1054 aaKnown RBP16.93■□□□□ 0.3
CDPF1-206ENST00000475605 KCNA1Q09470 495 aa16.93■□□□□ 0.3
CDPF1-206ENST00000475605 CCDC142Q17RM4 750 aa16.93■□□□□ 0.3
CDPF1-206ENST00000475605 SV2CQ496J9 727 aa16.93■□□□□ 0.3
CDPF1-206ENST00000475605 PLA2G2CQ5R387 149 aa16.93■□□□□ 0.3
CDPF1-206ENST00000475605 USP49Q70CQ1 688 aa16.93■□□□□ 0.3
CDPF1-206ENST00000475605 DYMQ7RTS9 669 aa16.93■□□□□ 0.3
CDPF1-206ENST00000475605 ZNF720Q7Z2F6 126 aa16.93■□□□□ 0.3
CDPF1-206ENST00000475605 MON1AQ86VX9 555 aa16.93■□□□□ 0.3
CDPF1-206ENST00000475605 SFR1Q86XK3 245 aa16.93■□□□□ 0.3
CDPF1-206ENST00000475605 TTC16Q8NEE8 873 aa16.93■□□□□ 0.3
CDPF1-206ENST00000475605 POMGNT1Q8WZA1 660 aa16.93■□□□□ 0.3
CDPF1-206ENST00000475605 EZH1Q92800 747 aaPredicted RBP16.93■□□□□ 0.3
CDPF1-206ENST00000475605 HHIPQ96QV1 700 aa16.93■□□□□ 0.3
CDPF1-206ENST00000475605 CYP2S1Q96SQ9 504 aa16.93■□□□□ 0.3
CDPF1-206ENST00000475605 ST6GALNAC4Q9H4F1 302 aa16.93■□□□□ 0.3
CDPF1-206ENST00000475605 L1RE1Q9UN81 338 aa16.93■□□□□ 0.3
CDPF1-206ENST00000475605 CLIC4Q9Y696 253 aa16.93■□□□□ 0.3
CDPF1-206ENST00000475605 CNOT1A5YKK6 2376 aaKnown RBP16.93■□□□□ 0.3
CDPF1-206ENST00000475605 ZFHX4Q86UP3 3567 aa16.92■□□□□ 0.3
CDPF1-206ENST00000475605 DCLK1O15075 740 aa16.92■□□□□ 0.3
CDPF1-206ENST00000475605 HCRTO43612 131 aa16.92■□□□□ 0.3
CDPF1-206ENST00000475605 ATG13O75143 517 aa16.92■□□□□ 0.3
CDPF1-206ENST00000475605 CYP2F1P24903 491 aa16.92■□□□□ 0.3
CDPF1-206ENST00000475605 DDX6P26196 483 aaKnown RBP eCLIP16.92■□□□□ 0.3
CDPF1-206ENST00000475605 GJA4P35212 333 aa16.92■□□□□ 0.3
CDPF1-206ENST00000475605 DDIT3P35638 169 aa16.92■□□□□ 0.3
CDPF1-206ENST00000475605 LONP1P36776 959 aaKnown RBP16.92■□□□□ 0.3
CDPF1-206ENST00000475605 STPG1Q5TH74 334 aa16.92■□□□□ 0.3
CDPF1-206ENST00000475605 TCEAL6Q6IPX3 200 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms