RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 CDK17Q00537 523 aa16.12■□□□□ 0.17
MCF2L-224ENST00000475524 SGO2Q562F6 1265 aa16.12■□□□□ 0.17
MCF2L-224ENST00000475524 PRSS55Q6UWB4 352 aaPredicted RBP16.12■□□□□ 0.17
MCF2L-224ENST00000475524 C4orf50Q6ZRC1 276 aa16.12■□□□□ 0.17
MCF2L-224ENST00000475524 RTL10Q7L3V2 364 aa16.12■□□□□ 0.17
MCF2L-224ENST00000475524 MRPL38Q96DV4 380 aaKnown RBP16.12■□□□□ 0.17
MCF2L-224ENST00000475524 B3GALT6Q96L58 329 aa16.12■□□□□ 0.17
MCF2L-224ENST00000475524 PANX2Q96RD6 677 aa16.12■□□□□ 0.17
MCF2L-224ENST00000475524 CLSTN3Q9BQT9 956 aa16.12■□□□□ 0.17
MCF2L-224ENST00000475524 ABHD10Q9NUJ1 306 aa16.12■□□□□ 0.17
MCF2L-224ENST00000475524 ATP8B3O60423 1300 aa16.12■□□□□ 0.17
MCF2L-224ENST00000475524 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-224ENST00000475524 C2orf71A6NGG8 1288 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 RNF225M0QZC1 329 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-224ENST00000475524 CYP26A1O43174 497 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 GFPT2O94808 682 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 PDGFRBP09619 1106 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 POU3F3P20264 500 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-224ENST00000475524 FECHP22830 423 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 GNA15P30679 374 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 USP8P40818 1118 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 CNGA2Q16280 664 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 ASIC2Q16515 512 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 CFAP221Q4G0U5 840 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 IRF2BP2Q7Z5L9 587 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 ACOT1Q86TX2 421 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 TC2NQ8N9U0 490 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 ZNF461Q8TAF7 563 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 SPPL2BQ8TCT7 592 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 EPS8L1Q8TE68 723 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 CPLX3Q8WVH0 158 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 PPP2R3CQ969Q6 453 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 CEP295NLQ96MC4 621 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 CDCA3Q99618 268 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-224ENST00000475524 HNRNPABQ99729 332 aaKnown RBP16.11■□□□□ 0.17
MCF2L-224ENST00000475524 CRTAC1Q9NQ79 661 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 ZNHIT6Q9NWK9 470 aaKnown RBP16.11■□□□□ 0.17
MCF2L-224ENST00000475524 PCDHGC3Q9UN70 934 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 CDY1Q9Y6F8 540 aa16.11■□□□□ 0.17
MCF2L-224ENST00000475524 MTCL1Q9Y4B5 1905 aaKnown RBP16.11■□□□□ 0.17
MCF2L-224ENST00000475524 O00370 1275 aa16.1■□□□□ 0.17
MCF2L-224ENST00000475524 ABLIM3O94929 683 aa16.1■□□□□ 0.17
MCF2L-224ENST00000475524 SERPING1P05155 500 aa16.1■□□□□ 0.17
MCF2L-224ENST00000475524 CNPP09543 421 aaKnown RBP16.1■□□□□ 0.17
MCF2L-224ENST00000475524 CPB1P15086 417 aa16.1■□□□□ 0.17
MCF2L-224ENST00000475524 CYP11B1P15538 503 aa16.1■□□□□ 0.17
MCF2L-224ENST00000475524 ACAT1P24752 427 aaKnown RBP16.1■□□□□ 0.17
MCF2L-224ENST00000475524 MAGEA11P43364 429 aa16.1■□□□□ 0.17
MCF2L-224ENST00000475524 ROR1Q01973 937 aa16.1■□□□□ 0.17
MCF2L-224ENST00000475524 ZNF394Q53GI3 561 aa16.1■□□□□ 0.17
MCF2L-224ENST00000475524 ZNF697Q5TEC3 545 aa16.1■□□□□ 0.17
MCF2L-224ENST00000475524 GDPD5Q8WTR4 605 aa16.1■□□□□ 0.17
MCF2L-224ENST00000475524 ZNF606Q8WXB4 792 aa16.1■□□□□ 0.17
MCF2L-224ENST00000475524 HEXIM2Q96MH2 286 aaKnown RBP16.1■□□□□ 0.17
MCF2L-224ENST00000475524 KLHL5Q96PQ7 755 aa16.1■□□□□ 0.17
MCF2L-224ENST00000475524 DPEP3Q9H4B8 488 aa16.1■□□□□ 0.17
MCF2L-224ENST00000475524 AFF4Q9UHB7 1163 aaKnown RBP16.1■□□□□ 0.17
MCF2L-224ENST00000475524 NOCTQ9UK39 431 aaKnown RBP16.1■□□□□ 0.17
MCF2L-224ENST00000475524 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.1■□□□□ 0.17
MCF2L-224ENST00000475524 PATJQ8NI35 1801 aa16.1■□□□□ 0.17
MCF2L-224ENST00000475524 SSU72P8A0A1W2PR75 194 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 MYBPHLA2RUH7 354 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 EPOPA6NHQ4 379 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 C2CD2LO14523 706 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 TEX28O15482 410 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 PNMA6AP0CW24 399 aaPredicted RBP16.09■□□□□ 0.17
MCF2L-224ENST00000475524 ATF2P15336 505 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 CD19P15391 556 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 OR1D2P34982 312 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 PSMC1P62191 440 aaKnown RBP16.09■□□□□ 0.17
MCF2L-224ENST00000475524 CDR2Q01850 454 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 KLHL30Q0D2K2 578 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 CCDC173Q0VFZ6 552 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 PLPP4Q5VZY2 271 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 PPP1R2P3Q6NXS1 205 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 LCLAT1Q6UWP7 414 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 VSTM1Q6UX27 236 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 RSPO2Q6UXX9 243 aaPredicted RBP16.09■□□□□ 0.17
MCF2L-224ENST00000475524 TRIM72Q6ZMU5 477 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 SLC47A2Q86VL8 602 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 HDAC7Q8WUI4 952 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 DDX1Q92499 740 aaKnown RBP16.09■□□□□ 0.17
MCF2L-224ENST00000475524 CYFIP2Q96F07 1278 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 PCED1BQ96HM7 432 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 SYT11Q9BT88 431 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 LHX5Q9H2C1 402 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 CERS4Q9HA82 394 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 DPP7Q9UHL4 492 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 GTF3C4Q9UKN8 822 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 PCDHB5Q9Y5E4 795 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 PLXNA3P51805 1871 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 CHD9Q3L8U1 2897 aa16.09■□□□□ 0.17
MCF2L-224ENST00000475524 WDR27A2RRH5 827 aa16.08■□□□□ 0.16
MCF2L-224ENST00000475524 MTMR11A4FU01 709 aa16.08■□□□□ 0.16
MCF2L-224ENST00000475524 THAP12O43422 761 aa16.08■□□□□ 0.16
MCF2L-224ENST00000475524 HCRTO43612 131 aa16.08■□□□□ 0.16
MCF2L-224ENST00000475524 ATP2C2O75185 946 aa16.08■□□□□ 0.16
MCF2L-224ENST00000475524 SETSIPP0DME0 302 aa16.08■□□□□ 0.16
MCF2L-224ENST00000475524 ADKP55263 362 aaKnown RBP16.08■□□□□ 0.16
MCF2L-224ENST00000475524 MAPK8IP2Q13387 824 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms