RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 HSFX1Q9UBD0 423 aa16.77■□□□□ 0.28
CPSF3-203ENST00000475482 DSEQ9UL01 958 aa16.77■□□□□ 0.28
CPSF3-203ENST00000475482 MRPS23Q9Y3D9 190 aaKnown RBP16.77■□□□□ 0.28
CPSF3-203ENST00000475482 KRBA1A5PL33 1030 aa16.76■□□□□ 0.27
CPSF3-203ENST00000475482 PES1O00541 588 aaKnown RBP16.76■□□□□ 0.27
CPSF3-203ENST00000475482 MOSPD3O75425 235 aa16.76■□□□□ 0.27
CPSF3-203ENST00000475482 TPM1P09493 284 aa16.76■□□□□ 0.27
CPSF3-203ENST00000475482 OR4Q2P0C623 313 aa16.76■□□□□ 0.27
CPSF3-203ENST00000475482 CPB1P15086 417 aa16.76■□□□□ 0.27
CPSF3-203ENST00000475482 PSMC2P35998 433 aaKnown RBP16.76■□□□□ 0.27
CPSF3-203ENST00000475482 GPD1LQ8N335 351 aa16.76■□□□□ 0.27
CPSF3-203ENST00000475482 C1orf127Q8N9H9 656 aa16.76■□□□□ 0.27
CPSF3-203ENST00000475482 SPC24Q8NBT2 197 aa16.76■□□□□ 0.27
CPSF3-203ENST00000475482 OR10T2Q8NGX3 314 aa16.76■□□□□ 0.27
CPSF3-203ENST00000475482 RTP3Q9BQQ7 232 aa16.76■□□□□ 0.27
CPSF3-203ENST00000475482 LRRC3Q9BY71 257 aa16.76■□□□□ 0.27
CPSF3-203ENST00000475482 VPS16Q9H269 839 aa16.76■□□□□ 0.27
CPSF3-203ENST00000475482 TAB2Q9NYJ8 693 aa16.76■□□□□ 0.27
CPSF3-203ENST00000475482 RBAKQ9NYW8 714 aaPredicted RBP16.76■□□□□ 0.27
CPSF3-203ENST00000475482 ARMCX3Q9UH62 379 aaPredicted RBP16.76■□□□□ 0.27
CPSF3-203ENST00000475482 MTMR11A4FU01 709 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 GOLGA8IPA6NC78 632 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 GOLGA8JA6NMD2 632 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 LGALS16A8MUM7 142 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 KPNA7A9QM74 516 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 NRG2O14511 850 aaPredicted RBP16.75■□□□□ 0.27
CPSF3-203ENST00000475482 CYB561D2O14569 222 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 NRDCO43847 1150 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 PNPLA4P41247 253 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 CCR2P41597 374 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 PTPN5P54829 565 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 TWF1Q12792 350 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 SPECC1LQ69YQ0 1117 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 SCARA3Q6AZY7 606 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 ARMCX5Q6P1M9 558 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 APTXQ7Z2E3 356 aaKnown RBP16.75■□□□□ 0.27
CPSF3-203ENST00000475482 VSTM4Q8IW00 320 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 SIX5Q8N196 739 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 LEMD2Q8NC56 503 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 TMEM209Q96SK2 561 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 ZCWPW1Q9H0M4 648 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 PCIF1Q9H4Z3 704 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 YIPF1Q9Y548 306 aa16.75■□□□□ 0.27
CPSF3-203ENST00000475482 ZNF197O14709 1029 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 CLIC2O15247 247 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 MAPK13O15264 365 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 GALR2O43603 387 aaPredicted RBP16.74■□□□□ 0.27
CPSF3-203ENST00000475482 EXOC3O60645 756 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 CFHP08603 1231 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 CEBPBP17676 345 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 AOC1P19801 751 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 TFAMQ00059 246 aaKnown RBP16.74■□□□□ 0.27
CPSF3-203ENST00000475482 UBXN1Q04323 297 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 DUSP4Q13115 394 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 TRIM14Q14142 442 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 SV2CQ496J9 727 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 VWA3BQ502W6 1294 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 CEP135Q66GS9 1140 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 TMC6Q7Z403 805 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 LRRC52Q8N7C0 313 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 ATAD1Q8NBU5 361 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 ST13P5Q8NFI4 369 aaPredicted RBP16.74■□□□□ 0.27
CPSF3-203ENST00000475482 GPR152Q8TDT2 470 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 CACTINQ8WUQ7 758 aaKnown RBP16.74■□□□□ 0.27
CPSF3-203ENST00000475482 IQCDQ96DY2 449 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 TCEAL4Q96EI5 215 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 ZNF512Q96ME7 567 aaPredicted RBP16.74■□□□□ 0.27
CPSF3-203ENST00000475482 ZNF560Q96MR9 790 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 PGLYRP2Q96PD5 576 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 CORO1BQ9BR76 489 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 KIAA1586Q9HCI6 787 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 PDE11AQ9HCR9 933 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 DMAC2Q9NW81 257 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 SIX4Q9UIU6 781 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 FBXL21Q9UKT6 434 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.74■□□□□ 0.27
CPSF3-203ENST00000475482 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.74■□□□□ 0.27
CPSF3-203ENST00000475482 F5P12259 2224 aa16.74■□□□□ 0.27
CPSF3-203ENST00000475482 ITIH6Q6UXX5 1313 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 A0A1W2PQC6 194 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 ZNF233A6NK53 670 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 PI15O43692 258 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 ECI2O75521 394 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 KRT13P13646 458 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 POLR2BP30876 1174 aaKnown RBP16.73■□□□□ 0.27
CPSF3-203ENST00000475482 CYP2J2P51589 502 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 GPC5P78333 572 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 PLD1Q13393 1074 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 WSCD1Q658N2 575 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 IQCEQ6IPM2 695 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 PHLDB3Q6NSJ2 640 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 TMC8Q8IU68 726 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 CBWD2Q8IUF1 395 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 FAM186BQ8IYM0 893 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 HS6ST3Q8IZP7 471 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 ELMOD1Q8N336 334 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 XXYLT1Q8NBI6 393 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 ING5Q8WYH8 240 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 MCRS1Q96EZ8 462 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 EEF2KMTQ96G04 330 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms