RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 DPH1Q9BZG8 443 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 TPSD1Q9BZJ3 242 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 BTBD1Q9H0C5 482 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 SMOC2Q9H3U7 446 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 A1CFQ9NQ94 594 aaKnown RBP6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 MRPS18AQ9NVS2 196 aaKnown RBP6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 A0A087WWL8 130 aa6.89□□□□□ -1.31
TM9SF3-204ENST00000475401 RHOBTB3O94955 611 aa6.89□□□□□ -1.31
TM9SF3-204ENST00000475401 PHKG2P15735 406 aa6.89□□□□□ -1.31
TM9SF3-204ENST00000475401 GATA3P23771 443 aa6.89□□□□□ -1.31
TM9SF3-204ENST00000475401 LRPAP1P30533 357 aa6.89□□□□□ -1.31
TM9SF3-204ENST00000475401 ACVRL1P37023 503 aa6.89□□□□□ -1.31
TM9SF3-204ENST00000475401 KRT17Q04695 432 aa6.89□□□□□ -1.31
TM9SF3-204ENST00000475401 GALEQ14376 348 aa6.89□□□□□ -1.31
TM9SF3-204ENST00000475401 SF3B3Q15393 1217 aaKnown RBP6.89□□□□□ -1.31
TM9SF3-204ENST00000475401 RBM20Q5T481 1227 aaKnown RBP6.89□□□□□ -1.31
TM9SF3-204ENST00000475401 TMPRSS9Q7Z410 1059 aa6.89□□□□□ -1.31
TM9SF3-204ENST00000475401 VRK3Q8IV63 474 aa6.89□□□□□ -1.31
TM9SF3-204ENST00000475401 SLC44A3Q8N4M1 653 aa6.89□□□□□ -1.31
TM9SF3-204ENST00000475401 AMER2Q8N7J2 671 aa6.89□□□□□ -1.31
TM9SF3-204ENST00000475401 TOR1AIP2Q8NFQ8 470 aa6.89□□□□□ -1.31
TM9SF3-204ENST00000475401 SLC30A5Q8TAD4 765 aa6.89□□□□□ -1.31
TM9SF3-204ENST00000475401 MS4A7Q9GZW8 240 aaPredicted RBP6.89□□□□□ -1.31
TM9SF3-204ENST00000475401 KCTD5Q9NXV2 234 aa6.89□□□□□ -1.31
TM9SF3-204ENST00000475401 RHPN2P1A8MT19 583 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 YY2O15391 372 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 ORC4O43929 436 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 RAMP2O60895 175 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 TGM1P22735 817 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 NXPH1P58417 271 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 FMO1Q01740 532 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 MPP3Q13368 585 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 CYB5RLQ6IPT4 315 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 Q6YL49 198 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 KRT78Q8N1N4 520 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 SLC16A11Q8NCK7 471 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 PJA1Q8NG27 643 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 FBXO41Q8TF61 875 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 IPCEF1Q8WWN9 437 aaPredicted RBP6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 NMD3Q96D46 503 aaKnown RBP6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 FBXL20Q96IG2 436 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 PGBD1Q96JS3 809 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 TTPALQ9BTX7 342 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 APOL5Q9BWW9 433 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 KRTAP9-3Q9BYQ3 159 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 LRIT1Q9P2V4 623 aa6.88□□□□□ -1.31
TM9SF3-204ENST00000475401 TRIM43BA6NCK2 446 aa6.87□□□□□ -1.31
TM9SF3-204ENST00000475401 INHBCP55103 352 aa6.87□□□□□ -1.31
TM9SF3-204ENST00000475401 LILRA4P59901 499 aa6.87□□□□□ -1.31
TM9SF3-204ENST00000475401 SCAPQ12770 1279 aa6.87□□□□□ -1.31
TM9SF3-204ENST00000475401 FSTL1Q12841 308 aa6.87□□□□□ -1.31
TM9SF3-204ENST00000475401 IFIT5Q13325 482 aaKnown RBP6.87□□□□□ -1.31
TM9SF3-204ENST00000475401 E2F2Q14209 437 aa6.87□□□□□ -1.31
TM9SF3-204ENST00000475401 HECTD2Q5U5R9 776 aa6.87□□□□□ -1.31
TM9SF3-204ENST00000475401 ICE2Q659A1 982 aa6.87□□□□□ -1.31
TM9SF3-204ENST00000475401 Q6ZNX1 250 aa6.87□□□□□ -1.31
TM9SF3-204ENST00000475401 ZNF627Q7L945 461 aa6.87□□□□□ -1.31
TM9SF3-204ENST00000475401 MRGPRGQ86SM5 289 aa6.87□□□□□ -1.31
TM9SF3-204ENST00000475401 SLC9A6Q92581 669 aa6.87□□□□□ -1.31
TM9SF3-204ENST00000475401 TRIM43Q96BQ3 446 aaPredicted RBP6.87□□□□□ -1.31
TM9SF3-204ENST00000475401 FAM136AQ96C01 138 aa6.87□□□□□ -1.31
TM9SF3-204ENST00000475401 PTDSS2Q9BVG9 487 aa6.87□□□□□ -1.31
TM9SF3-204ENST00000475401 TMPRSS5Q9H3S3 457 aa6.87□□□□□ -1.31
TM9SF3-204ENST00000475401 PNPLA8Q9NP80 782 aa6.87□□□□□ -1.31
TM9SF3-204ENST00000475401 MAST3O60307 1309 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 MBD3L4A6NDZ8 208 aaPredicted RBP6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 MBD3L3A6NE82 208 aaPredicted RBP6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 DCLK1O15075 740 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 RASSF9O75901 435 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 ESRRBO95718 433 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 PPP3CBP16298 524 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 KLRC1P26715 233 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 PPIFP30405 207 aaKnown RBP6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 TOB1P50616 345 aaPredicted RBP6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 TGFB2P61812 414 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 PICALMQ13492 652 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 BOP1Q14137 746 aaKnown RBP6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 ERCC6LQ2NKX8 1250 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 NBPF8Q3BBV2 869 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 VWA1Q6PCB0 445 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 SMCR8Q8TEV9 937 aaPredicted RBP6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 RAPGEF4Q8WZA2 1011 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 PHKBQ93100 1093 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 SPSB4Q96A44 273 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 PPP1R9BQ96SB3 815 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 STRBPQ96SI9 672 aaKnown RBP6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 STK31Q9BXU1 1019 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 ACTRT3Q9BYD9 372 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 TOR3AQ9H497 397 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 SMURF2Q9HAU4 748 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 ARNT2Q9HBZ2 717 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 STK32BQ9NY57 414 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 PACSIN3Q9UKS6 424 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 HDAC9Q9UKV0 1011 aa6.86□□□□□ -1.31
TM9SF3-204ENST00000475401 PYCARD-AS1I3L0S3 204 aa6.85□□□□□ -1.31
TM9SF3-204ENST00000475401 GCP02774 474 aa6.85□□□□□ -1.31
TM9SF3-204ENST00000475401 FOLR3P41439 243 aa6.85□□□□□ -1.31
TM9SF3-204ENST00000475401 ZNF134P52741 427 aa6.85□□□□□ -1.31
TM9SF3-204ENST00000475401 MRPS35P82673 323 aaKnown RBP6.85□□□□□ -1.31
TM9SF3-204ENST00000475401 DPTQ07507 201 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms