RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 PRMT7Q9NVM4 692 aaPredicted RBP11.42□□□□□ -0.58
VAPB-204ENST00000475243 PBLDP30039 288 aaPredicted RBP11.42□□□□□ -0.58
VAPB-204ENST00000475243 PTGER2P43116 358 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 SEMA3FQ13275 785 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 RAD9BQ6WBX8 426 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 TRAPPC11Q7Z392 1133 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 POP1Q99575 1024 aaKnown RBP11.42□□□□□ -0.58
VAPB-204ENST00000475243 DNAJC7Q99615 494 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 GOLGA4Q13439 2230 aaKnown RBP11.42□□□□□ -0.58
VAPB-204ENST00000475243 CYTH3O43739 400 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 PPP1R37O75864 691 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 WDR47O94967 919 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 SLC29A2Q14542 456 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 EFHC1Q5JVL4 640 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 PLEKHM3Q6ZWE6 761 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 ACOT1Q86TX2 421 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 JAMLQ86YT9 394 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 ARMC2Q8NEN0 867 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 SCFD2Q8WU76 684 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 ERP27Q96DN0 273 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 PLEKHA8Q96JA3 519 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 SEC16BQ96JE7 1060 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 RSAD1Q9HA92 442 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 NYAP2Q9P242 653 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 TAF6LQ9Y6J9 622 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 IQGAP3Q86VI3 1631 aa11.42□□□□□ -0.58
VAPB-204ENST00000475243 RPA1P27694 616 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 POU4F1Q01851 419 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 TRIM28Q13263 835 aaKnown RBP11.41□□□□□ -0.58
VAPB-204ENST00000475243 SF3B3Q15393 1217 aaKnown RBP11.41□□□□□ -0.58
VAPB-204ENST00000475243 KCNT1Q5JUK3 1230 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 MIB1Q86YT6 1006 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 MDM1Q8TC05 714 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 SPATA16Q9BXB7 569 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 MTIF3Q9H2K0 278 aaKnown RBP11.41□□□□□ -0.58
VAPB-204ENST00000475243 USE1Q9NZ43 259 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 MAFGO15525 162 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 RAP1GAPP47736 663 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 CTCFP49711 727 aaPredicted RBP11.41□□□□□ -0.58
VAPB-204ENST00000475243 ARMC6Q6NXE6 501 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 HHIPL2Q6UWX4 724 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 DENND5BQ6ZUT9 1274 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 TRIM48Q8IWZ4 208 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 ZNF34Q8IZ26 560 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 NMRK2Q9NPI5 230 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 CRLS1Q9UJA2 301 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 SNRPAP09012 282 aaKnown RBP11.41□□□□□ -0.58
VAPB-204ENST00000475243 KLRK1P26718 216 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 NCALDP61601 193 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 MIER2Q8N344 545 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 THAP11Q96EK4 314 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 VPS50Q96JG6 964 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 PLA2G12BQ9BX93 195 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 THAP2Q9H0W7 228 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 SSU72P8A0A1W2PR75 194 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 C17orf102A2RUQ5 167 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 UBE2Q2LH0YL09 131 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 ASS1P00966 412 aaKnown RBP11.41□□□□□ -0.58
VAPB-204ENST00000475243 CCZ1BP86790 482 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 CCZ1P86791 482 aaPredicted RBP11.41□□□□□ -0.58
VAPB-204ENST00000475243 DDX39BQ13838 428 aaKnown RBP11.41□□□□□ -0.58
VAPB-204ENST00000475243 ENTPD3O75355 529 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 DPEP1P16444 411 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 CAPZA2P47755 286 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 SERPINB9P50453 376 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 NME5P56597 212 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 LAMC2Q13753 1193 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 TKFCQ3LXA3 575 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 JADE3Q92613 823 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 KCND2Q9NZV8 630 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 TARBP1Q13395 1621 aaKnown RBP11.41□□□□□ -0.58
VAPB-204ENST00000475243 CLASP2O75122 1294 aaKnown RBP11.41□□□□□ -0.58
VAPB-204ENST00000475243 AP1G2O75843 785 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 SGPL1O95470 568 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 APOA1P02647 267 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 KLRC1P26715 233 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 MRPS15P82914 257 aaKnown RBP11.41□□□□□ -0.58
VAPB-204ENST00000475243 TBL3Q12788 808 aaKnown RBP11.41□□□□□ -0.58
VAPB-204ENST00000475243 C16orf89Q6UX73 402 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 CCNI2Q6ZMN8 369 aaPredicted RBP11.41□□□□□ -0.58
VAPB-204ENST00000475243 RNF180Q86T96 592 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 DCP1BQ8IZD4 617 aaKnown RBP11.41□□□□□ -0.58
VAPB-204ENST00000475243 NIF3L1Q9GZT8 377 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 MORC2Q9Y6X9 1032 aaPredicted RBP11.41□□□□□ -0.58
VAPB-204ENST00000475243 TTLL13PA6NNM8 815 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 TBX3O15119 743 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 EIF3DO15371 548 aaKnown RBP eCLIP11.41□□□□□ -0.58
VAPB-204ENST00000475243 KDM1AO60341 852 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 ACO1P21399 889 aaKnown RBP11.41□□□□□ -0.58
VAPB-204ENST00000475243 ITPK1Q13572 414 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 CCDC142Q17RM4 750 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 LRRC8BQ6P9F7 803 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 IYDQ6PHW0 289 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 ATP11BQ9Y2G3 1177 aa11.41□□□□□ -0.58
VAPB-204ENST00000475243 B2RBV5 119 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 CSDE1O75534 798 aaKnown RBP11.4□□□□□ -0.58
VAPB-204ENST00000475243 SLC25A27O95847 323 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 CETPP11597 493 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 TGM2P21980 687 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 HPCAP84074 193 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms