RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 ZSWIM3Q96MP5 696 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 ASB16Q96NS5 453 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 PHOX2BQ99453 314 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 LPIN3Q9BQK8 851 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 PLA2G2FQ9BZM2 168 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 SCAND2PQ9GZW5 306 aaPredicted RBP10.13□□□□□ -0.79
PDPN-204ENST00000475043 IRF2BPLQ9H1B7 796 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 DDX43Q9NXZ2 648 aaKnown RBP10.13□□□□□ -0.79
PDPN-204ENST00000475043 HSFX1Q9UBD0 423 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 USP25Q9UHP3 1055 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 SIX4Q9UIU6 781 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 L1RE1Q9UN81 338 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 ASB3Q9Y575 518 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 MIA3Q5JRA6 1907 aa10.13□□□□□ -0.79
PDPN-204ENST00000475043 COL4A3Q01955 1670 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 KLRC4O43908 158 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 EXOC3O60645 756 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 MOSPD3O75425 235 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 CLSTN1O94985 981 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 DCNP07585 359 aaKnown RBP10.12□□□□□ -0.79
PDPN-204ENST00000475043 GABRR2P28476 465 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 MRE11P49959 708 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 NDUFA8P51970 172 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 CYP24A1Q07973 514 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 SMARCB1Q12824 385 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 STK4Q13043 487 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 PSMD2Q13200 908 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 MLF2Q15773 248 aaPredicted RBP10.12□□□□□ -0.79
PDPN-204ENST00000475043 NFE2Q16621 373 aaPredicted RBP10.12□□□□□ -0.79
PDPN-204ENST00000475043 BMT2Q1RMZ1 405 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 KMT5BQ4FZB7 885 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 SLC44A4Q53GD3 710 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 PHLDB3Q6NSJ2 640 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 NYAP1Q6ZVC0 841 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 TMC8Q8IU68 726 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 ADGRF2Q8IZF7 708 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 TMEM86AQ8N2M4 240 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 FSIP1Q8NA03 581 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 CXorf38Q8TB03 319 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 GIPC2Q8TF65 315 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 SMARCD2Q92925 531 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 MMS19Q96T76 1030 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 ACBD6Q9BR61 282 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 PI4K2AQ9BTU6 479 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 TRMT61BQ9BVS5 477 aaKnown RBP10.12□□□□□ -0.79
PDPN-204ENST00000475043 FOXQ1Q9C009 403 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 GPR88Q9GZN0 384 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 ATXN3LQ9H3M9 355 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 BRD9Q9H8M2 597 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 GDAP2Q9NXN4 497 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 CGNQ9P2M7 1197 aaKnown RBP10.12□□□□□ -0.79
PDPN-204ENST00000475043 HPSEQ9Y251 543 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 SIT1Q9Y3P8 196 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 PCDHB5Q9Y5E4 795 aa10.12□□□□□ -0.79
PDPN-204ENST00000475043 TICRRQ7Z2Z1 1910 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 NUP210Q8TEM1 1887 aaPredicted RBP10.11□□□□□ -0.79
PDPN-204ENST00000475043 PHACTR2O75167 634 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 PRPF40AO75400 957 aaKnown RBP10.11□□□□□ -0.79
PDPN-204ENST00000475043 FGF19O95750 216 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 RPN1P04843 607 aaKnown RBP10.11□□□□□ -0.79
PDPN-204ENST00000475043 HAPLN1P10915 354 aaPredicted RBP10.11□□□□□ -0.79
PDPN-204ENST00000475043 PSMC3P17980 439 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 ATF6P18850 670 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 CD72P21854 359 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 FCARP24071 287 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 VIPR2P41587 438 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 LHX1P48742 406 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 PRSS12P56730 875 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 STARD6P59095 220 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 PRKCQQ04759 706 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 UBXN2BQ14CS0 331 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 PSMD6Q15008 389 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 SOWAHAQ2M3V2 549 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 ARHGAP15Q53QZ3 475 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 STXBP5Q5T5C0 1151 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 GPR158Q5T848 1215 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 VITQ6UXI7 678 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 TPRG1Q6ZUI0 275 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 TRAPPC11Q7Z392 1133 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 GPIHBP1Q8IV16 184 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 CCDC105Q8IYK2 499 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 TOP6BLQ8N6T0 577 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 DTWD2Q8NBA8 298 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 KIAA0895Q8NCT3 520 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 GOLGA5Q8TBA6 731 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 CCDC47Q96A33 483 aaKnown RBP10.11□□□□□ -0.79
PDPN-204ENST00000475043 GCNAQ96QF7 691 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 CGRRF1Q99675 332 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 LRRC3Q9BY71 257 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 GDPD2Q9HCC8 539 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 ZNF334Q9HCZ1 680 aaPredicted RBP10.11□□□□□ -0.79
PDPN-204ENST00000475043 HEBP1Q9NRV9 189 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 TMLHEQ9NVH6 421 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 GTF3C4Q9UKN8 822 aa10.11□□□□□ -0.79
PDPN-204ENST00000475043 KANSL1LA0AUZ9 987 aa10.1□□□□□ -0.79
PDPN-204ENST00000475043 HCRTO43612 131 aa10.1□□□□□ -0.79
PDPN-204ENST00000475043 CST3P01034 146 aaPredicted RBP10.1□□□□□ -0.79
PDPN-204ENST00000475043 MYL1P05976 194 aa10.1□□□□□ -0.79
PDPN-204ENST00000475043 CYP2F1P24903 491 aa10.1□□□□□ -0.79
PDPN-204ENST00000475043 PCSK1P29120 753 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms