RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 PI4K2AQ9BTU6 479 aa16.84■□□□□ 0.29
SRRT-209ENST00000474896 CCSER1Q9C0I3 900 aa16.84■□□□□ 0.29
SRRT-209ENST00000474896 ST6GALNAC4Q9H4F1 302 aa16.84■□□□□ 0.29
SRRT-209ENST00000474896 HPS4Q9NQG7 708 aa16.84■□□□□ 0.29
SRRT-209ENST00000474896 TMLHEQ9NVH6 421 aa16.84■□□□□ 0.29
SRRT-209ENST00000474896 MAGED2Q9UNF1 606 aaPredicted RBP16.84■□□□□ 0.29
SRRT-209ENST00000474896 SLC8A2Q9UPR5 921 aa16.84■□□□□ 0.29
SRRT-209ENST00000474896 PCDHB5Q9Y5E4 795 aa16.84■□□□□ 0.29
SRRT-209ENST00000474896 TCHHQ07283 1943 aa16.84■□□□□ 0.29
SRRT-209ENST00000474896 ZNF638Q14966 1978 aaKnown RBP16.84■□□□□ 0.29
SRRT-209ENST00000474896 TRDMT1O14717 391 aaKnown RBP16.83■□□□□ 0.28
SRRT-209ENST00000474896 ATG13O75143 517 aa16.83■□□□□ 0.28
SRRT-209ENST00000474896 PRPF40AO75400 957 aaKnown RBP16.83■□□□□ 0.28
SRRT-209ENST00000474896 RPP40O75818 363 aaKnown RBP16.83■□□□□ 0.28
SRRT-209ENST00000474896 SYT1P21579 422 aa16.83■□□□□ 0.28
SRRT-209ENST00000474896 KCNA4P22459 653 aa16.83■□□□□ 0.28
SRRT-209ENST00000474896 DDX6P26196 483 aaKnown RBP eCLIP16.83■□□□□ 0.28
SRRT-209ENST00000474896 ADSSP30520 456 aa16.83■□□□□ 0.28
SRRT-209ENST00000474896 GPR15P49685 360 aa16.83■□□□□ 0.28
SRRT-209ENST00000474896 TSC2P49815 1807 aa16.83■□□□□ 0.28
SRRT-209ENST00000474896 POU5F1Q01860 360 aaKnown RBP16.83■□□□□ 0.28
SRRT-209ENST00000474896 CCDC6Q16204 474 aa16.83■□□□□ 0.28
SRRT-209ENST00000474896 SV2CQ496J9 727 aa16.83■□□□□ 0.28
SRRT-209ENST00000474896 AASDHQ4L235 1098 aaPredicted RBP16.83■□□□□ 0.28
SRRT-209ENST00000474896 CACNA2D4Q7Z3S7 1137 aa16.83■□□□□ 0.28
SRRT-209ENST00000474896 EFCAB13Q8IY85 973 aa16.83■□□□□ 0.28
SRRT-209ENST00000474896 GAB3Q8WWW8 586 aa16.83■□□□□ 0.28
SRRT-209ENST00000474896 TDP1Q9NUW8 608 aa16.83■□□□□ 0.28
SRRT-209ENST00000474896 VPS37CA5D8V6 355 aaPredicted RBP16.82■□□□□ 0.28
SRRT-209ENST00000474896 BMP15O95972 392 aa16.82■□□□□ 0.28
SRRT-209ENST00000474896 ARSAP15289 507 aa16.82■□□□□ 0.28
SRRT-209ENST00000474896 GALK1P51570 392 aa16.82■□□□□ 0.28
SRRT-209ENST00000474896 AMPD2Q01433 879 aa16.82■□□□□ 0.28
SRRT-209ENST00000474896 TSPY1Q01534 308 aa16.82■□□□□ 0.28
SRRT-209ENST00000474896 POSTNQ15063 836 aa16.82■□□□□ 0.28
SRRT-209ENST00000474896 SF3A2Q15428 464 aaKnown RBP16.82■□□□□ 0.28
SRRT-209ENST00000474896 SF3A1Q15459 793 aaKnown RBP16.82■□□□□ 0.28
SRRT-209ENST00000474896 SDHAF4Q5VUM1 108 aa16.82■□□□□ 0.28
SRRT-209ENST00000474896 IL31Q6EBC2 164 aa16.82■□□□□ 0.28
SRRT-209ENST00000474896 CC2D1AQ6P1N0 951 aaPredicted RBP16.82■□□□□ 0.28
SRRT-209ENST00000474896 DYMQ7RTS9 669 aa16.82■□□□□ 0.28
SRRT-209ENST00000474896 KBTBD6Q86V97 674 aa16.82■□□□□ 0.28
SRRT-209ENST00000474896 MON1AQ86VX9 555 aa16.82■□□□□ 0.28
SRRT-209ENST00000474896 STKLD1Q8NE28 680 aa16.82■□□□□ 0.28
SRRT-209ENST00000474896 MRPS31Q92665 395 aaKnown RBP16.82■□□□□ 0.28
SRRT-209ENST00000474896 CHFRQ96EP1 664 aa16.82■□□□□ 0.28
SRRT-209ENST00000474896 LOXL4Q96JB6 756 aa16.82■□□□□ 0.28
SRRT-209ENST00000474896 CHAMP1Q96JM3 812 aa16.82■□□□□ 0.28
SRRT-209ENST00000474896 FBRSL1Q9HCM7 1045 aaKnown RBP16.82■□□□□ 0.28
SRRT-209ENST00000474896 POLR3BQ9NW08 1133 aaPredicted RBP16.82■□□□□ 0.28
SRRT-209ENST00000474896 DENND4CQ5VZ89 1909 aa16.82■□□□□ 0.28
SRRT-209ENST00000474896 CCDC163A0A0D9SF12 145 aa16.81■□□□□ 0.28
SRRT-209ENST00000474896 IL18RAPO95256 599 aa16.81■□□□□ 0.28
SRRT-209ENST00000474896 EGFP01133 1207 aa16.81■□□□□ 0.28
SRRT-209ENST00000474896 ZNF806P0C7X5 589 aa16.81■□□□□ 0.28
SRRT-209ENST00000474896 CSH1P0DML2 217 aa16.81■□□□□ 0.28
SRRT-209ENST00000474896 CSH2P0DML3 217 aa16.81■□□□□ 0.28
SRRT-209ENST00000474896 CCDC192P0DO97 292 aa16.81■□□□□ 0.28
SRRT-209ENST00000474896 RAP1GAPP47736 663 aa16.81■□□□□ 0.28
SRRT-209ENST00000474896 TFAMQ00059 246 aaKnown RBP16.81■□□□□ 0.28
SRRT-209ENST00000474896 DDR2Q16832 855 aa16.81■□□□□ 0.28
SRRT-209ENST00000474896 SFR1Q86XK3 245 aa16.81■□□□□ 0.28
SRRT-209ENST00000474896 NT5DC4Q86YG4 428 aa16.81■□□□□ 0.28
SRRT-209ENST00000474896 C12orf50Q8NA57 414 aaPredicted RBP16.81■□□□□ 0.28
SRRT-209ENST00000474896 RIN3Q8TB24 985 aa16.81■□□□□ 0.28
SRRT-209ENST00000474896 DDX1Q92499 740 aaKnown RBP16.81■□□□□ 0.28
SRRT-209ENST00000474896 EPSTI1Q96J88 318 aa16.81■□□□□ 0.28
SRRT-209ENST00000474896 ZNF560Q96MR9 790 aa16.81■□□□□ 0.28
SRRT-209ENST00000474896 AGAP1Q9UPQ3 857 aa16.81■□□□□ 0.28
SRRT-209ENST00000474896 SPAG17Q6Q759 2223 aa16.81■□□□□ 0.28
SRRT-209ENST00000474896 SOBPA7XYQ1 873 aa16.8■□□□□ 0.28
SRRT-209ENST00000474896 STX6O43752 255 aa16.8■□□□□ 0.28
SRRT-209ENST00000474896 RNF40O75150 1001 aa16.8■□□□□ 0.28
SRRT-209ENST00000474896 CYP2F1P24903 491 aa16.8■□□□□ 0.28
SRRT-209ENST00000474896 POLR2BP30876 1174 aaKnown RBP16.8■□□□□ 0.28
SRRT-209ENST00000474896 PNPLA4P41247 253 aa16.8■□□□□ 0.28
SRRT-209ENST00000474896 WNT7BP56706 349 aa16.8■□□□□ 0.28
SRRT-209ENST00000474896 KCNA1Q09470 495 aa16.8■□□□□ 0.28
SRRT-209ENST00000474896 NFE2Q16621 373 aaPredicted RBP16.8■□□□□ 0.28
SRRT-209ENST00000474896 USP49Q70CQ1 688 aa16.8■□□□□ 0.28
SRRT-209ENST00000474896 PDCL2Q8N4E4 241 aa16.8■□□□□ 0.28
SRRT-209ENST00000474896 ZSWIM2Q8NEG5 633 aa16.8■□□□□ 0.28
SRRT-209ENST00000474896 HVCN1Q96D96 273 aa16.8■□□□□ 0.28
SRRT-209ENST00000474896 CYP2S1Q96SQ9 504 aa16.8■□□□□ 0.28
SRRT-209ENST00000474896 ACBD6Q9BR61 282 aa16.8■□□□□ 0.28
SRRT-209ENST00000474896 FAM213AQ9BRX8 229 aa16.8■□□□□ 0.28
SRRT-209ENST00000474896 MRPL44Q9H9J2 332 aaKnown RBP16.8■□□□□ 0.28
SRRT-209ENST00000474896 KIF9Q9HAQ2 790 aa16.8■□□□□ 0.28
SRRT-209ENST00000474896 RXFP3Q9NSD7 469 aa16.8■□□□□ 0.28
SRRT-209ENST00000474896 DDX43Q9NXZ2 648 aaKnown RBP16.8■□□□□ 0.28
SRRT-209ENST00000474896 TBC1D7Q9P0N9 293 aa16.8■□□□□ 0.28
SRRT-209ENST00000474896 MTMR6Q9Y217 621 aa16.8■□□□□ 0.28
SRRT-209ENST00000474896 CNOT1A5YKK6 2376 aaKnown RBP16.8■□□□□ 0.28
SRRT-209ENST00000474896 GREB1Q4ZG55 1949 aa16.79■□□□□ 0.28
SRRT-209ENST00000474896 HUS1O60921 280 aa16.79■□□□□ 0.28
SRRT-209ENST00000474896 EPN2O95208 641 aa16.79■□□□□ 0.28
SRRT-209ENST00000474896 ITGB3P05106 788 aa16.79■□□□□ 0.28
SRRT-209ENST00000474896 DRD1P21728 446 aa16.79■□□□□ 0.28
SRRT-209ENST00000474896 ACAT1P24752 427 aaKnown RBP16.79■□□□□ 0.28
SRRT-209ENST00000474896 LIMK1P53667 647 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms