RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 PAWRQ96IZ0 340 aaKnown RBP7.04□□□□□ -1.28
ATG4A-207ENST00000474825 NOX5Q96PH1 765 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 TWNKQ96RR1 684 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 MRPL45Q9BRJ2 306 aaKnown RBP7.04□□□□□ -1.28
ATG4A-207ENST00000474825 NT5C1AQ9BXI3 368 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 HIPK3Q9H422 1215 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 C11orf49Q9H6J7 331 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 DNAI1Q9UI46 699 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 GUCA1BQ9UMX6 200 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 L1RE1Q9UN81 338 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 R3HCC1Q9Y3T6 440 aaKnown RBP7.04□□□□□ -1.28
ATG4A-207ENST00000474825 CAPN6Q9Y6Q1 641 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 CITO14578 2027 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 PDCD11Q14690 1871 aaKnown RBP7.04□□□□□ -1.28
ATG4A-207ENST00000474825 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.03□□□□□ -1.28
ATG4A-207ENST00000474825 GRID2IPA4D2P6 1211 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 PODXLO00592 558 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 THAP12O43422 761 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 MED7O43513 233 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 EFEMP2O95967 443 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 CLTBP09497 229 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 FGFR1P11362 822 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 CD58P19256 250 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 CASQ1P31415 396 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 GPD2P43304 727 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 RAP1GAPP47736 663 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 GABRB2P47870 512 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 CLCNKBP51801 687 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 NDST1P52848 882 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 LRRC26Q2I0M4 334 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 NOMO2Q5JPE7 1267 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 HABP4Q5JVS0 413 aaKnown RBP7.03□□□□□ -1.28
ATG4A-207ENST00000474825 TAF3Q5VWG9 929 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 PLEKHA7Q6IQ23 1121 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 DCLRE1AQ6PJP8 1040 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 GLB1LQ6UWU2 654 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 SCARA5Q6ZMJ2 495 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 COLGALT2Q8IYK4 626 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 TMEM86AQ8N2M4 240 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 PDCL2Q8N4E4 241 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 TMEM35BQ8NCS4 154 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 C3orf58Q8NDZ4 430 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 TPCN2Q8NHX9 752 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 SLC35G2Q8TBE7 412 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 STK32AQ8WU08 396 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 CTNNBL1Q8WYA6 563 aaPredicted RBP7.03□□□□□ -1.28
ATG4A-207ENST00000474825 ARHGEF26Q96DR7 871 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 TRIM11Q96F44 468 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 CASD1Q96PB1 797 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 RPS6KC1Q96S38 1066 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 PRR14Q9BWN1 585 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 THAP2Q9H0W7 228 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 GOLGA2P5Q9HBQ8 144 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 AAASQ9NRG9 546 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 UVRAGQ9P2Y5 699 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 HMGXB4Q9UGU5 601 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.03□□□□□ -1.28
ATG4A-207ENST00000474825 COG5Q9UP83 839 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 STXBP5LQ9Y2K9 1186 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 JRKLQ9Y4A0 524 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 SNX9Q9Y5X1 595 aa7.03□□□□□ -1.28
ATG4A-207ENST00000474825 MACROD2A1Z1Q3 448 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 CTAGE9A4FU28 777 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 CES2O00748 559 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 HOXA2O43364 376 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 HUS1O60921 280 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 DDHD2O94830 711 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 MOCS3O95396 460 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 TIMP1P01033 207 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 CALCAP01258 141 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 PFKMP08237 780 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 SETSIPP0DME0 302 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 TYMPP19971 482 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 IGFBP6P24592 240 aaPredicted RBP7.02□□□□□ -1.29
ATG4A-207ENST00000474825 BRD2P25440 801 aaKnown RBP7.02□□□□□ -1.29
ATG4A-207ENST00000474825 CYP2C18P33260 490 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 GTF2F1P35269 517 aaKnown RBP eCLIP7.02□□□□□ -1.29
ATG4A-207ENST00000474825 LHX1P48742 406 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 ZNF394Q53GI3 561 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 SGO2Q562F6 1265 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 ZNF697Q5TEC3 545 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 MEI1Q5TIA1 1274 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 C11orf63Q6NUN7 778 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 CNKSR3Q6P9H4 555 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 OSTM1Q86WC4 334 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 DNAAF5Q86Y56 855 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 NPAS4Q8IUM7 802 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 APPL2Q8NEU8 664 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 SLC35F5Q8WV83 523 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 SUSD3Q96L08 255 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 SENP8Q96LD8 212 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 MMS19Q96T76 1030 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 NAPGQ99747 312 aaPredicted RBP7.02□□□□□ -1.29
ATG4A-207ENST00000474825 PAAF1Q9BRP4 392 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 TMEM175Q9BSA9 504 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 TLR10Q9BXR5 811 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 CYLDQ9NQC7 956 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 TMEM39AQ9NV64 488 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 MRFAP1Q9Y605 127 aa7.02□□□□□ -1.29
ATG4A-207ENST00000474825 SCN1AP35498 2009 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms