RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 SCN10AQ9Y5Y9 1956 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 C3orf70A6NLC5 250 aaPredicted RBP10.36□□□□□ -0.75
USP39-214ENST00000474572 SRRM3A6NNA2 597 aaPredicted RBP10.36□□□□□ -0.75
USP39-214ENST00000474572 F8VP50 259 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 GAS8O95995 478 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 KRT1P04264 644 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 ERBB2P04626 1255 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 SETSIPP0DME0 302 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 TCF4P15884 667 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 ITIH2P19823 946 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 CYP3A5P20815 502 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 FGFR4P22455 802 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 CETN2P41208 172 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 RGS2P41220 211 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 NDST1P52848 882 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 PLTPP55058 493 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 INHBEP58166 350 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 NKX3-2P78367 333 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 PDCLQ13371 301 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 SLMAPQ14BN4 828 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 TAF1CQ15572 869 aaPredicted RBP10.36□□□□□ -0.75
USP39-214ENST00000474572 PKDCCQ504Y2 493 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 PRAMEF19Q5SWL8 479 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 CYP4A22Q5TCH4 519 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 DCUN1D2Q6PH85 259 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 LCLAT1Q6UWP7 414 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 MFSD7Q6UXD7 560 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 LRRC31Q6UY01 552 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 SPOCD1Q6ZMY3 1216 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 CATSPER4Q7RTX7 472 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 SH2D3CQ8N5H7 860 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 ARFGAP1Q8N6T3 406 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 ATG4AQ8WYN0 398 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 RNF25Q96BH1 459 aaPredicted RBP10.36□□□□□ -0.75
USP39-214ENST00000474572 TLCD1Q96CP7 247 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 ZMAT2Q96NC0 199 aaKnown RBP10.36□□□□□ -0.75
USP39-214ENST00000474572 SCLT1Q96NL6 688 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 KATNAL1Q9BW62 490 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 AAASQ9NRG9 546 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 SNTG2Q9NY99 539 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 USTQ9Y2C2 406 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 ATP8A1Q9Y2Q0 1164 aa10.36□□□□□ -0.75
USP39-214ENST00000474572 RIPK2O43353 540 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 LIASO43766 372 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 LRCH4O75427 683 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 CAPN15O75808 1086 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 PFKMP08237 780 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 MYZAPP0CAP1 466 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 KRT3P12035 628 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 KCNE1P15382 129 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 NR1D1P20393 614 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 KLRC2P26717 231 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 RFC1P35251 1148 aaPredicted RBP10.35□□□□□ -0.75
USP39-214ENST00000474572 CDKN2BP42772 138 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 IRAK1P51617 712 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 PSMC1P62191 440 aaKnown RBP10.35□□□□□ -0.75
USP39-214ENST00000474572 LMNB2Q03252 620 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 SNX17Q15036 470 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 PPP1R7Q15435 360 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 CCL14Q16627 93 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 ZSCAN26Q16670 478 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 KCTD19Q17RG1 926 aaPredicted RBP10.35□□□□□ -0.75
USP39-214ENST00000474572 ATP13A4Q4VNC1 1196 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 UBXN11Q5T124 520 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 ARHGAP17Q68EM7 881 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 TXNRD3NBQ6F5E7 133 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 CHADLQ6NUI6 762 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 RGMBQ6NW40 437 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 LEKR1Q6ZMV7 388 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 LIMS2Q7Z4I7 341 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 CROCCP2Q86T23 111 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 UNC93AQ86WB7 457 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 IFNL1Q8IU54 200 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 RELL1Q8IUW5 271 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 CCDC50Q8IVM0 306 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 NME8Q8N427 588 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 ARFGAP2Q8N6H7 521 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 BBOF1Q8ND07 529 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 BEST2Q8NFU1 509 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 OR2W6PQ8NHA6 318 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 NKD2Q969F2 451 aaPredicted RBP10.35□□□□□ -0.75
USP39-214ENST00000474572 SNF8Q96H20 258 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 OSMRQ99650 979 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 NT5C1AQ9BXI3 368 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 CAPS2Q9BXY5 557 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 EIF2AQ9BY44 585 aaKnown RBP10.35□□□□□ -0.75
USP39-214ENST00000474572 FRMD8P1Q9BZ68 369 aaPredicted RBP10.35□□□□□ -0.75
USP39-214ENST00000474572 MIS12Q9H081 205 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 FAM49AQ9H0Q0 323 aaPredicted RBP10.35□□□□□ -0.75
USP39-214ENST00000474572 TSPYL1Q9H0U9 437 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 METTL5Q9NRN9 209 aaKnown RBP10.35□□□□□ -0.75
USP39-214ENST00000474572 UBQLN1Q9UMX0 589 aaKnown RBP10.35□□□□□ -0.75
USP39-214ENST00000474572 DRG1Q9Y295 367 aaKnown RBP10.35□□□□□ -0.75
USP39-214ENST00000474572 PTPN22Q9Y2R2 807 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 NME7Q9Y5B8 376 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 CASP8AP2Q9UKL3 1982 aa10.35□□□□□ -0.75
USP39-214ENST00000474572 GOLGA6L10A6NI86 522 aa10.34□□□□□ -0.75
USP39-214ENST00000474572 M0QYV0 167 aa10.34□□□□□ -0.75
USP39-214ENST00000474572 PIRO00625 290 aa10.34□□□□□ -0.75
USP39-214ENST00000474572 DPYSL4O14531 572 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms