RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 MED21Q13503 144 aa19.54■□□□□ 0.72
ECHDC1-214ENST00000474289 GRM2Q14416 872 aa19.54■□□□□ 0.72
ECHDC1-214ENST00000474289 LRRC36Q1X8D7 754 aa19.54■□□□□ 0.72
ECHDC1-214ENST00000474289 TMCO4Q5TGY1 634 aa19.54■□□□□ 0.72
ECHDC1-214ENST00000474289 SLF2Q8IX21 1173 aa19.54■□□□□ 0.72
ECHDC1-214ENST00000474289 EXD1Q8NHP7 514 aa19.54■□□□□ 0.72
ECHDC1-214ENST00000474289 FAM111AQ96PZ2 611 aa19.54■□□□□ 0.72
ECHDC1-214ENST00000474289 WDR18Q9BV38 432 aa19.54■□□□□ 0.72
ECHDC1-214ENST00000474289 AMNQ9BXJ7 453 aa19.54■□□□□ 0.72
ECHDC1-214ENST00000474289 POLIQ9UNA4 740 aa19.54■□□□□ 0.72
ECHDC1-214ENST00000474289 SHOC2Q9UQ13 582 aa19.54■□□□□ 0.72
ECHDC1-214ENST00000474289 PMM2O15305 246 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 PSMD10O75832 226 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 EEF2P13639 858 aaKnown RBP19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 GAD2Q05329 585 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 R3HDM1Q15032 1099 aaKnown RBP19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 HIF1AQ16665 826 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 CCDC174Q6PII3 467 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 NLRX1Q86UT6 975 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 DCAKDQ8WVC6 231 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 NACC1Q96RE7 527 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 KCND2Q9NZV8 630 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 GGA1Q9UJY5 639 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 GMEB1Q9Y692 573 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 SMIM31A0A1B0GVY4 71 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 GOLGA8IPA6NC78 632 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 GOLGA8JA6NMD2 632 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 PI4K2BG5E9Z4 385 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 KRT5P13647 590 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 NFX1Q12986 1120 aaKnown RBP19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 SFT2D3Q587I9 215 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 RPGRQ92834 1020 aaKnown RBP19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 ACSS3Q9H6R3 686 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 RHBDL2Q9NX52 303 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 USTQ9Y2C2 406 aa19.53■□□□□ 0.72
ECHDC1-214ENST00000474289 ATP9BO43861 1147 aa19.52■□□□□ 0.72
ECHDC1-214ENST00000474289 GTF2IP78347 998 aa19.52■□□□□ 0.72
ECHDC1-214ENST00000474289 HSF5Q4G112 596 aaPredicted RBP19.52■□□□□ 0.72
ECHDC1-214ENST00000474289 ACBD5Q5T8D3 534 aaPredicted RBP19.52■□□□□ 0.72
ECHDC1-214ENST00000474289 SHKBP1Q8TBC3 707 aa19.52■□□□□ 0.72
ECHDC1-214ENST00000474289 PYROXD1Q8WU10 500 aa19.52■□□□□ 0.72
ECHDC1-214ENST00000474289 FAM172AQ8WUF8 416 aa19.52■□□□□ 0.72
ECHDC1-214ENST00000474289 TMEM206Q9H813 350 aa19.52■□□□□ 0.72
ECHDC1-214ENST00000474289 POLLQ9UGP5 575 aa19.52■□□□□ 0.72
ECHDC1-214ENST00000474289 RBBP6Q7Z6E9 1792 aaKnown RBP19.52■□□□□ 0.72
ECHDC1-214ENST00000474289 MYPNQ86TC9 1320 aa19.52■□□□□ 0.72
ECHDC1-214ENST00000474289 hCG_2014768A0A024R1R8 64 aa19.52■□□□□ 0.71
ECHDC1-214ENST00000474289 DCAF8L1A6NGE4 600 aa19.52■□□□□ 0.71
ECHDC1-214ENST00000474289 PFDN1O60925 122 aa19.52■□□□□ 0.71
ECHDC1-214ENST00000474289 TMCC1O94876 653 aa19.52■□□□□ 0.71
ECHDC1-214ENST00000474289 FAM163BP0C2L3 166 aa19.52■□□□□ 0.71
ECHDC1-214ENST00000474289 PHBP35232 272 aa19.52■□□□□ 0.71
ECHDC1-214ENST00000474289 MSLNQ13421 630 aaPredicted RBP19.52■□□□□ 0.71
ECHDC1-214ENST00000474289 MSS51Q4VC12 460 aa19.52■□□□□ 0.71
ECHDC1-214ENST00000474289 ATP13A4Q4VNC1 1196 aa19.52■□□□□ 0.71
ECHDC1-214ENST00000474289 C3orf62Q6ZUJ4 267 aa19.52■□□□□ 0.71
ECHDC1-214ENST00000474289 DHDDSQ86SQ9 333 aa19.52■□□□□ 0.71
ECHDC1-214ENST00000474289 C12orf56Q8IXR9 622 aa19.52■□□□□ 0.71
ECHDC1-214ENST00000474289 ATP11CQ8NB49 1132 aa19.52■□□□□ 0.71
ECHDC1-214ENST00000474289 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.52■□□□□ 0.71
ECHDC1-214ENST00000474289 NT5C1BQ96P26 610 aa19.52■□□□□ 0.71
ECHDC1-214ENST00000474289 WDR83Q9BRX9 315 aaKnown RBP19.52■□□□□ 0.71
ECHDC1-214ENST00000474289 PPARGC1AQ9UBK2 798 aaKnown RBP19.52■□□□□ 0.71
ECHDC1-214ENST00000474289 GREB1LQ9C091 1923 aaPredicted RBP19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 SPECC1L-ADORA2AF8WAN1 911 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 FKBP6O75344 327 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 IL1BP01584 269 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 CYP3A4P08684 503 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 UQCRBP14927 111 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 ATF7P17544 494 aaPredicted RBP19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 TPP2P29144 1249 aaPredicted RBP19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 ASPHQ12797 758 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 DNAL1Q4LDG9 190 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 DRICH1Q6PGQ1 229 aaPredicted RBP19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 RNF111Q6ZNA4 994 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 ADGRG6Q86SQ4 1221 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 MIPOL1Q8TD10 442 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 CCDC127Q96BQ5 260 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 DNAJC1Q96KC8 554 aaKnown RBP19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 ZNF510Q9Y2H8 683 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 NRAPQ86VF7 1730 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 SETSIPP0DME0 302 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 GPC3P51654 580 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 PRELPP51888 382 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 AQP4P55087 323 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 DLG1Q12959 904 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 KLHL38Q2WGJ6 581 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 SH2D4BQ5SQS7 431 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 KRT39Q6A163 491 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 FBXO11Q86XK2 927 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 CBWD2Q8IUF1 395 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 GSTCDQ8NEC7 633 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 TAS1R2Q8TE23 839 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 TMEM174Q8WUU8 243 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 PYDC1Q8WXC3 89 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 S100A14Q9HCY8 104 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 KCNK4Q9NYG8 393 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 CNTN3Q9P232 1028 aa19.51■□□□□ 0.71
ECHDC1-214ENST00000474289 TAGLN3Q9UI15 199 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms