RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 SPTBN4Q9H254 2564 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 MAGEB16A2A368 324 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 A6NNZ2 444 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 POLRMTO00411 1230 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 OPLAHO14841 1288 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 HDAC3O15379 428 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 EFCAB14O75071 495 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 FLOT1O75955 427 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 CD2BP2O95400 341 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 PAPLNO95428 1278 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 ALBP02768 609 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 UBL4AP11441 157 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 RLBP1P12271 317 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 HOXD13P35453 343 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 TRIM23P36406 574 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 PRMT2P55345 433 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 WNT7BP56706 349 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 SLC8A3P57103 927 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 YBEYP58557 167 aaPredicted RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 TFAP4Q01664 338 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 ZNF252P-AS1Q0IIN9 211 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 BFSP1Q12934 665 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 HAUS3Q68CZ6 603 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 PDPK2PQ6A1A2 396 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 TMEM132EQ6IEE7 984 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 SRGAP1Q7Z6B7 1085 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 SESTD1Q86VW0 696 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 HID1Q8IV36 788 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 SHCBP1Q8NEM2 672 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 PRSS33Q8NF86 280 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 NEDD1Q8NHV4 660 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 DDX1Q92499 740 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 C19orf60Q96EN9 201 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 RIPOR3Q96MK2 946 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 LPIN3Q9BQK8 851 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 RSRP1Q9BUV0 290 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 UPF3BQ9BZI7 483 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 API5Q9BZZ5 524 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 MTMR12Q9C0I1 747 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 BHMT2Q9H2M3 363 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 R3HDMLQ9H3Y0 253 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 THAP9Q9H5L6 903 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 STN1Q9H668 368 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 TAS2R3Q9NYW6 316 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 GPRC5BQ9NZH0 403 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 EHD2Q9NZN4 543 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 TRPM5Q9NZQ8 1165 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 PAIP2BQ9ULR5 123 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 MON2Q7Z3U7 1717 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 ASH1LQ9NR48 2969 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 A0A087WV62 115 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 SLU7O95391 586 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 SGPL1O95470 568 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 ZBED1O96006 694 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 SRGAP2CP0DJJ0 459 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 ARAFP10398 606 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 PSMC2P35998 433 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 RARSP54136 660 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 PMS2P54278 862 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 SLC12A3P55017 1021 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 CSNK2BP67870 215 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 NOP14P78316 857 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 GSTO1P78417 241 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 RBP5P82980 135 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 SP3Q02447 781 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 FOXO1Q12778 655 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 PLCL1Q15111 1095 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 HADHQ16836 314 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 CYP27C1Q4G0S4 372 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 PKDCCQ504Y2 493 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 FNDC3BQ53EP0 1204 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 USP39Q53GS9 565 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 DGKKQ5KSL6 1271 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 RBM20Q5T481 1227 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 FDX2Q6P4F2 183 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 LMBR1LQ6UX01 489 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 AGMOQ6ZNB7 445 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 RFX8Q6ZV50 586 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 COMTD1Q86VU5 262 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 KIAA0319LQ8IZA0 1049 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 AHI1Q8N157 1196 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 DDI1Q8WTU0 396 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 BCL7CQ8WUZ0 217 aaPredicted RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 NXPE3Q969Y0 559 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 FAM149B1Q96BN6 582 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 CNOT6LQ96LI5 555 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 AK8Q96MA6 479 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 CLUHP3Q96NS8 147 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 CCT7Q99832 543 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 OSBPL7Q9BZF2 842 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 ADNPQ9H2P0 1102 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 JMJD4Q9H9V9 463 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 COX16Q9P0S2 106 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 IL19Q9UHD0 177 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 SALL4Q9UJQ4 1053 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 PSME2Q9UL46 239 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 CFL2Q9Y281 166 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 ZNF510Q9Y2H8 683 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 MAPK8IP3Q9UPT6 1336 aa6.44□□□□□ -1.38
SMARCE1-208ENST00000474246 CPSF1Q10570 1443 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms