RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 EHBP1Q8NDI1 1231 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 TATDN2Q93075 761 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 FAXDC2Q96IV6 333 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 TNIP3Q96KP6 325 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 SEPT5Q99719 369 aaPredicted RBP13.25□□□□□ -0.29
DDX56-209ENST00000473924 BPIFA3Q9BQP9 254 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 FUCA2Q9BTY2 467 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 NDST4Q9H3R1 872 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 TMLHEQ9NVH6 421 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 GCNT4Q9P109 453 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 SLC27A5Q9Y2P5 690 aa13.25□□□□□ -0.29
DDX56-209ENST00000473924 MYBPHLA2RUH7 354 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 IL9P15248 144 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 PTPN1P18031 435 aaKnown RBP13.24□□□□□ -0.29
DDX56-209ENST00000473924 TBXAS1P24557 533 aaPredicted RBP13.24□□□□□ -0.29
DDX56-209ENST00000473924 TUFMP49411 452 aaKnown RBP13.24□□□□□ -0.29
DDX56-209ENST00000473924 YWHAEP62258 255 aaKnown RBP13.24□□□□□ -0.29
DDX56-209ENST00000473924 CYP27A1Q02318 531 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 TWF1Q12792 350 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 PLD1Q13393 1074 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 CUL2Q13617 745 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 MDH1BQ5I0G3 518 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 TJAP1Q5JTD0 557 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 CDKAL1Q5VV42 579 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 GBP6Q6ZN66 633 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 UNC93AQ86WB7 457 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 PPM1KQ8N3J5 372 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 TTC39CQ8N584 583 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 B3GALNT2Q8NCR0 500 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 NECTIN4Q96NY8 510 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 CRACR2AQ9BSW2 395 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 DPEP3Q9H4B8 488 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 CRTAC1Q9NQ79 661 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 TAB2Q9NYJ8 693 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 HSFX1Q9UBD0 423 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 CDH22Q9UJ99 828 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 YIPF1Q9Y548 306 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 PRUNE2Q8WUY3 3088 aa13.24□□□□□ -0.29
DDX56-209ENST00000473924 VNN2O95498 520 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 EPHB3P54753 998 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 INCA1Q0VD86 236 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 ORC1Q13415 861 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 VEPH1Q14D04 833 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 SMAD2Q15796 467 aaKnown RBP13.23□□□□□ -0.29
DDX56-209ENST00000473924 EXOC3L4Q17RC7 722 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 CCDC142Q17RM4 750 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 IQCEQ6IPM2 695 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 FAM171BQ6P995 826 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 GRASPQ7Z6J2 395 aaPredicted RBP13.23□□□□□ -0.29
DDX56-209ENST00000473924 ACOT1Q86TX2 421 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 TTC9BQ8N6N2 239 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 MYCBPAPQ8TBZ2 947 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 FAM200AQ8TCP9 573 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 SUSD6Q92537 303 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 MYLPFQ96A32 169 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 ZNF707Q96C28 371 aaPredicted RBP13.23□□□□□ -0.29
DDX56-209ENST00000473924 ZNF512Q96ME7 567 aaPredicted RBP13.23□□□□□ -0.29
DDX56-209ENST00000473924 PKMYT1Q99640 499 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 ARID3AQ99856 593 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 MED10Q9BTT4 135 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 NT5C1AQ9BXI3 368 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 INTS2Q9H0H0 1204 aaKnown RBP13.23□□□□□ -0.29
DDX56-209ENST00000473924 VPS16Q9H269 839 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 CRISPLD1Q9H336 500 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 ABCB6Q9NP58 842 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 CISHQ9NSE2 258 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 NME7Q9Y5B8 376 aa13.23□□□□□ -0.29
DDX56-209ENST00000473924 GTPBP10A4D1E9 387 aaKnown RBP13.22□□□□□ -0.29
DDX56-209ENST00000473924 CILPO75339 1184 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 SOAT2O75908 522 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 CAVIN2O95810 425 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 HAPLN1P10915 354 aaPredicted RBP13.22□□□□□ -0.29
DDX56-209ENST00000473924 BMP1P13497 986 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 PTPN2P17706 415 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 CYP2F1P24903 491 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 RPL10AP62906 217 aaKnown RBP13.22□□□□□ -0.29
DDX56-209ENST00000473924 TPM4P67936 248 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 NCAPHQ15003 741 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 KRT31Q15323 416 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 TAF12Q16514 161 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 CFAP221Q4G0U5 840 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 ZNF394Q53GI3 561 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 MIIPQ5JXC2 388 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 RRAGAQ7L523 313 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 SCN4BQ8IWT1 228 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 DHX40Q8IX18 779 aaKnown RBP13.22□□□□□ -0.29
DDX56-209ENST00000473924 LMO3Q8TAP4 145 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 FEZF2Q8TBJ5 459 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 PCED1BQ96HM7 432 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 FUBP3Q96I24 572 aaKnown RBP eCLIP13.22□□□□□ -0.29
DDX56-209ENST00000473924 LPIN3Q9BQK8 851 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 RHOBTB2Q9BYZ6 727 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 POMKQ9H5K3 350 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 FAM124BQ9H5Z6 455 aaPredicted RBP13.22□□□□□ -0.29
DDX56-209ENST00000473924 HMGXB4Q9UGU5 601 aa13.22□□□□□ -0.29
DDX56-209ENST00000473924 ATP8B3O60423 1300 aa13.21□□□□□ -0.29
DDX56-209ENST00000473924 CLUHO75153 1309 aa13.21□□□□□ -0.29
DDX56-209ENST00000473924 GOLGA6L19H0YKK7 550 aa13.21□□□□□ -0.29
DDX56-209ENST00000473924 POU2F2P09086 479 aa13.21□□□□□ -0.29
DDX56-209ENST00000473924 SLC9A1P19634 815 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms