RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 TRPV6Q9H1D0 765 aa19.05■□□□□ 0.64
VARS2-206ENST00000473916 CCDC188H7C350 402 aa19.05■□□□□ 0.64
VARS2-206ENST00000473916 TTI1O43156 1089 aa19.05■□□□□ 0.64
VARS2-206ENST00000473916 CD4P01730 458 aa19.05■□□□□ 0.64
VARS2-206ENST00000473916 PDGFRBP09619 1106 aa19.05■□□□□ 0.64
VARS2-206ENST00000473916 PSMC1P62191 440 aaKnown RBP19.05■□□□□ 0.64
VARS2-206ENST00000473916 CCDC142Q17RM4 750 aa19.05■□□□□ 0.64
VARS2-206ENST00000473916 DCUN1D2Q6PH85 259 aa19.05■□□□□ 0.64
VARS2-206ENST00000473916 ANKS1BQ7Z6G8 1248 aa19.05■□□□□ 0.64
VARS2-206ENST00000473916 XYLT1Q86Y38 959 aa19.05■□□□□ 0.64
VARS2-206ENST00000473916 PRELID2Q8N945 189 aa19.05■□□□□ 0.64
VARS2-206ENST00000473916 C3orf20Q8ND61 904 aa19.05■□□□□ 0.64
VARS2-206ENST00000473916 PXYLP1Q8TE99 480 aa19.05■□□□□ 0.64
VARS2-206ENST00000473916 AENQ8WTP8 325 aaKnown RBP19.05■□□□□ 0.64
VARS2-206ENST00000473916 GDF3Q9NR23 364 aa19.05■□□□□ 0.64
VARS2-206ENST00000473916 NOD1Q9Y239 953 aa19.05■□□□□ 0.64
VARS2-206ENST00000473916 MAP2K7O14733 419 aa19.04■□□□□ 0.64
VARS2-206ENST00000473916 RFC1P35251 1148 aaPredicted RBP19.04■□□□□ 0.64
VARS2-206ENST00000473916 SLC1A1P43005 524 aa19.04■□□□□ 0.64
VARS2-206ENST00000473916 SSR1P43307 286 aaKnown RBP19.04■□□□□ 0.64
VARS2-206ENST00000473916 TNNT3P45378 269 aaPredicted RBP19.04■□□□□ 0.64
VARS2-206ENST00000473916 CBX1P83916 185 aa19.04■□□□□ 0.64
VARS2-206ENST00000473916 SIX1Q15475 284 aaPredicted RBP19.04■□□□□ 0.64
VARS2-206ENST00000473916 ATP13A4Q4VNC1 1196 aa19.04■□□□□ 0.64
VARS2-206ENST00000473916 TXNRD3NBQ6F5E7 133 aa19.04■□□□□ 0.64
VARS2-206ENST00000473916 LCLAT1Q6UWP7 414 aa19.04■□□□□ 0.64
VARS2-206ENST00000473916 AGMOQ6ZNB7 445 aa19.04■□□□□ 0.64
VARS2-206ENST00000473916 DDX42Q86XP3 938 aaKnown RBP eCLIP19.04■□□□□ 0.64
VARS2-206ENST00000473916 SLC13A5Q86YT5 568 aaPredicted RBP19.04■□□□□ 0.64
VARS2-206ENST00000473916 EMC1Q8N766 993 aa19.04■□□□□ 0.64
VARS2-206ENST00000473916 IFT81Q8WYA0 676 aa19.04■□□□□ 0.64
VARS2-206ENST00000473916 PIWIL1Q96J94 861 aaKnown RBP19.04■□□□□ 0.64
VARS2-206ENST00000473916 SYNCQ9H7C4 482 aa19.04■□□□□ 0.64
VARS2-206ENST00000473916 ST7Q9NRC1 585 aa19.04■□□□□ 0.64
VARS2-206ENST00000473916 MCM3P25205 808 aa19.03■□□□□ 0.64
VARS2-206ENST00000473916 RGS7P49802 495 aa19.03■□□□□ 0.64
VARS2-206ENST00000473916 LILRA4P59901 499 aa19.03■□□□□ 0.64
VARS2-206ENST00000473916 PAK2Q13177 524 aa19.03■□□□□ 0.64
VARS2-206ENST00000473916 PTK7Q13308 1070 aa19.03■□□□□ 0.64
VARS2-206ENST00000473916 CASP8Q14790 479 aa19.03■□□□□ 0.64
VARS2-206ENST00000473916 TTC30AQ86WT1 665 aa19.03■□□□□ 0.64
VARS2-206ENST00000473916 RNF169Q8NCN4 708 aa19.03■□□□□ 0.64
VARS2-206ENST00000473916 C18orf8Q96DM3 657 aa19.03■□□□□ 0.64
VARS2-206ENST00000473916 ZNF560Q96MR9 790 aa19.03■□□□□ 0.64
VARS2-206ENST00000473916 TRIM51Q9BSJ1 452 aa19.03■□□□□ 0.64
VARS2-206ENST00000473916 METTL5Q9NRN9 209 aaKnown RBP19.03■□□□□ 0.64
VARS2-206ENST00000473916 NFU1Q9UMS0 254 aa19.03■□□□□ 0.64
VARS2-206ENST00000473916 PTCH2Q9Y6C5 1203 aa19.03■□□□□ 0.64
VARS2-206ENST00000473916 TDRD15B5MCY1 1934 aaKnown RBP19.03■□□□□ 0.64
VARS2-206ENST00000473916 ARL5CA6NH57 179 aa19.03■□□□□ 0.64
VARS2-206ENST00000473916 A8MXQ7 604 aa19.03■□□□□ 0.64
VARS2-206ENST00000473916 GPR182O15218 404 aa19.03■□□□□ 0.64
VARS2-206ENST00000473916 ATF7P17544 494 aaPredicted RBP19.03■□□□□ 0.64
VARS2-206ENST00000473916 TAF6P49848 677 aa19.03■□□□□ 0.64
VARS2-206ENST00000473916 TTC27Q6P3X3 843 aa19.03■□□□□ 0.64
VARS2-206ENST00000473916 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.03■□□□□ 0.64
VARS2-206ENST00000473916 ACSF2Q96CM8 615 aaPredicted RBP19.03■□□□□ 0.64
VARS2-206ENST00000473916 IP6K2Q9UHH9 426 aa19.03■□□□□ 0.64
VARS2-206ENST00000473916 A0A1W2PQ45 241 aaPredicted RBP19.02■□□□□ 0.64
VARS2-206ENST00000473916 A0A1W2PQY0 241 aa19.02■□□□□ 0.64
VARS2-206ENST00000473916 XPOTO43592 962 aaKnown RBP19.02■□□□□ 0.64
VARS2-206ENST00000473916 FKTNO75072 461 aa19.02■□□□□ 0.64
VARS2-206ENST00000473916 MYCP01106 439 aaPredicted RBP19.02■□□□□ 0.64
VARS2-206ENST00000473916 RARAP10276 462 aa19.02■□□□□ 0.64
VARS2-206ENST00000473916 CCDC130P13994 396 aa19.02■□□□□ 0.64
VARS2-206ENST00000473916 SCNN1GP51170 649 aa19.02■□□□□ 0.64
VARS2-206ENST00000473916 OSTM1Q86WC4 334 aa19.02■□□□□ 0.64
VARS2-206ENST00000473916 SH3TC2Q8TF17 1288 aa19.02■□□□□ 0.64
VARS2-206ENST00000473916 NAP1L3Q99457 506 aaPredicted RBP19.02■□□□□ 0.64
VARS2-206ENST00000473916 PAAF1Q9BRP4 392 aa19.02■□□□□ 0.64
VARS2-206ENST00000473916 CHST12Q9NRB3 414 aa19.02■□□□□ 0.64
VARS2-206ENST00000473916 GDAP2Q9NXN4 497 aa19.02■□□□□ 0.64
VARS2-206ENST00000473916 OGFRQ9NZT2 677 aa19.02■□□□□ 0.64
VARS2-206ENST00000473916 STRIP2Q9ULQ0 834 aa19.02■□□□□ 0.64
VARS2-206ENST00000473916 E5RJQ4 531 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 FAM153BP0C7A2 387 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 KRT3P12035 628 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 FAM153CQ494X1 144 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 SMYD5Q6GMV2 418 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 HDXQ7Z353 690 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 C3orf58Q8NDZ4 430 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 RUBCNQ92622 972 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 GLT1D1Q96MS3 346 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 SLITRK6Q9H5Y7 841 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 FAM153AQ9UHL3 310 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 PI4K2BG5E9Z4 385 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 GABBR2O75899 941 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 TNFRSF8P28908 595 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 LRPAP1P30533 357 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 GRK4P32298 578 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 MAN1A1P33908 653 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 DSC3Q14574 896 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 PKDCCQ504Y2 493 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 PMF1Q6P1K2 205 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 LIMS2Q7Z4I7 341 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 RHOT1Q8IXI2 618 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 IFT20Q8IY31 132 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 TTC39CQ8N584 583 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 ARFGAP1Q8N6T3 406 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 ADAM2Q99965 735 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms