RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 IFNAR1P17181 557 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 LIG1P18858 919 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 ITPKBP27987 946 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 NAMPTP43490 491 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 TUFMP49411 452 aaKnown RBP11.46□□□□□ -0.57
SSBP1-209ENST00000473783 SEC13P55735 322 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 RPL6Q02878 288 aaKnown RBP11.46□□□□□ -0.57
SSBP1-209ENST00000473783 KCNC4Q03721 635 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 NR1H3Q13133 447 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 MTF1Q14872 753 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 NTRK3Q16288 839 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 GALNT17Q6IS24 598 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 TMEM92Q6UXU6 159 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 SLC36A4Q6YBV0 504 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 USP37Q86T82 979 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 SLFN12Q8IYM2 578 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 CCDC33Q8N5R6 958 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 MAB21L3Q8N8X9 362 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 CEP120Q8N960 986 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 RIN3Q8TB24 985 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 DEPTORQ8TB45 409 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 OSCP1Q8WVF1 389 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 LPIN3Q9BQK8 851 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 SLC26A6Q9BXS9 759 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 DUS2Q9NX74 493 aaKnown RBP11.46□□□□□ -0.57
SSBP1-209ENST00000473783 CNTN3Q9P232 1028 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 TNFSF13BQ9Y275 285 aa11.46□□□□□ -0.57
SSBP1-209ENST00000473783 MYO9AB2RTY4 2548 aa11.46□□□□□ -0.58
SSBP1-209ENST00000473783 ANK1P16157 1881 aa11.45□□□□□ -0.58
SSBP1-209ENST00000473783 ATF6P18850 670 aa11.45□□□□□ -0.58
SSBP1-209ENST00000473783 IFNAR2P48551 515 aa11.45□□□□□ -0.58
SSBP1-209ENST00000473783 EFNA5P52803 228 aa11.45□□□□□ -0.58
SSBP1-209ENST00000473783 ZNF33AQ06730 810 aa11.45□□□□□ -0.58
SSBP1-209ENST00000473783 SRSF1Q07955 248 aaKnown RBP eCLIP11.45□□□□□ -0.58
SSBP1-209ENST00000473783 PPP2R5AQ15172 486 aa11.45□□□□□ -0.58
SSBP1-209ENST00000473783 TAF12Q16514 161 aa11.45□□□□□ -0.58
SSBP1-209ENST00000473783 LRRC69Q6ZNQ3 347 aa11.45□□□□□ -0.58
SSBP1-209ENST00000473783 MAEAQ7L5Y9 396 aa11.45□□□□□ -0.58
SSBP1-209ENST00000473783 NEK8Q86SG6 692 aa11.45□□□□□ -0.58
SSBP1-209ENST00000473783 FAM177A1Q8N128 213 aaPredicted RBP11.45□□□□□ -0.58
SSBP1-209ENST00000473783 PIGOQ8TEQ8 1089 aa11.45□□□□□ -0.58
SSBP1-209ENST00000473783 BSNDQ8WZ55 320 aa11.45□□□□□ -0.58
SSBP1-209ENST00000473783 C18orf25Q96B23 403 aaPredicted RBP11.45□□□□□ -0.58
SSBP1-209ENST00000473783 NACC1Q96RE7 527 aa11.45□□□□□ -0.58
SSBP1-209ENST00000473783 NAP1L4Q99733 375 aaKnown RBP11.45□□□□□ -0.58
SSBP1-209ENST00000473783 ZDHHC5Q9C0B5 715 aa11.45□□□□□ -0.58
SSBP1-209ENST00000473783 SUSD2Q9UGT4 822 aa11.45□□□□□ -0.58
SSBP1-209ENST00000473783 TEX15Q9BXT5 2789 aa11.45□□□□□ -0.58
SSBP1-209ENST00000473783 BAG4O95429 457 aaKnown RBP11.44□□□□□ -0.58
SSBP1-209ENST00000473783 LARGE1O95461 756 aa11.44□□□□□ -0.58
SSBP1-209ENST00000473783 NTRK1P04629 796 aa11.44□□□□□ -0.58
SSBP1-209ENST00000473783 ATP2B1P20020 1258 aa11.44□□□□□ -0.58
SSBP1-209ENST00000473783 FAM160A1Q05DH4 1040 aa11.44□□□□□ -0.58
SSBP1-209ENST00000473783 NPY5RQ15761 445 aa11.44□□□□□ -0.58
SSBP1-209ENST00000473783 EML3Q32P44 896 aa11.44□□□□□ -0.58
SSBP1-209ENST00000473783 PLEKHG6Q3KR16 790 aa11.44□□□□□ -0.58
SSBP1-209ENST00000473783 EOGTQ5NDL2 527 aa11.44□□□□□ -0.58
SSBP1-209ENST00000473783 NT5DC1Q5TFE4 455 aa11.44□□□□□ -0.58
SSBP1-209ENST00000473783 GPR155Q7Z3F1 870 aa11.44□□□□□ -0.58
SSBP1-209ENST00000473783 TMEM150AQ86TG1 271 aa11.44□□□□□ -0.58
SSBP1-209ENST00000473783 HMGB4Q8WW32 186 aa11.44□□□□□ -0.58
SSBP1-209ENST00000473783 SEPT5Q99719 369 aaPredicted RBP11.44□□□□□ -0.58
SSBP1-209ENST00000473783 CDT1Q9H211 546 aa11.44□□□□□ -0.58
SSBP1-209ENST00000473783 FAM124BQ9H5Z6 455 aaPredicted RBP11.44□□□□□ -0.58
SSBP1-209ENST00000473783 TOR4AQ9NXH8 423 aa11.44□□□□□ -0.58
SSBP1-209ENST00000473783 TIMM13Q9Y5L4 95 aaPredicted RBP11.44□□□□□ -0.58
SSBP1-209ENST00000473783 ANAPC1Q9H1A4 1944 aa11.44□□□□□ -0.58
SSBP1-209ENST00000473783 SGK1O00141 431 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 CCNT1O60563 726 aaKnown RBP11.43□□□□□ -0.58
SSBP1-209ENST00000473783 F11P03951 625 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 HMGB1P09429 215 aaKnown RBP11.43□□□□□ -0.58
SSBP1-209ENST00000473783 ZNF883P0CG24 379 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 HLA-EP13747 358 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 TYMPP19971 482 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 HSPA4P34932 840 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 EIF2S3P41091 472 aaKnown RBP11.43□□□□□ -0.58
SSBP1-209ENST00000473783 OPRD1P41143 372 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 AARSP49588 968 aaKnown RBP eCLIP11.43□□□□□ -0.58
SSBP1-209ENST00000473783 NLRP12P59046 1061 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 OSTNP61366 133 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 USP4Q13107 963 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 ZNF77Q15935 545 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 MGAT5BQ3V5L5 792 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 ZNF568Q3ZCX4 644 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 TXNDC8Q6A555 127 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 OVOS1Q6IE37 1185 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 ARMCX5Q6P1M9 558 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 PCSK4Q6UW60 755 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 MON1AQ86VX9 555 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 PGBD3Q8N328 593 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 ALLCQ8N6M5 410 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 IL17RCQ8NAC3 791 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 TXNDC5Q8NBS9 432 aaKnown RBP11.43□□□□□ -0.58
SSBP1-209ENST00000473783 BAHD1Q8TBE0 780 aaPredicted RBP11.43□□□□□ -0.58
SSBP1-209ENST00000473783 SETD7Q8WTS6 366 aaKnown RBP11.43□□□□□ -0.58
SSBP1-209ENST00000473783 MRPS31Q92665 395 aaKnown RBP11.43□□□□□ -0.58
SSBP1-209ENST00000473783 ACAP3Q96P50 834 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 PNMA5Q96PV4 448 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 CDC6Q99741 560 aa11.43□□□□□ -0.58
SSBP1-209ENST00000473783 ANO2Q9NQ90 1003 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms