RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 ZNF280CQ8ND82 737 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 CFAP57Q96MR6 1250 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 CISHQ9NSE2 258 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 PHTF1Q9UMS5 762 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 LOC285556D6RIA3 1793 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 MAGEB2O15479 319 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 DKC1O60832 514 aaKnown RBP eCLIP11.53□□□□□ -0.56
C9orf3-214ENST00000473778 ECM2O94769 699 aaPredicted RBP11.53□□□□□ -0.56
C9orf3-214ENST00000473778 UNC5CO95185 931 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 ANP32DO95626 131 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 SSTR1P30872 391 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 RFC1P35251 1148 aaPredicted RBP11.53□□□□□ -0.56
C9orf3-214ENST00000473778 MSH2P43246 934 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 INHBEP58166 350 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 ZNF280AP59817 542 aaPredicted RBP11.53□□□□□ -0.56
C9orf3-214ENST00000473778 RNASELQ05823 741 aaKnown RBP11.53□□□□□ -0.56
C9orf3-214ENST00000473778 MKRN3Q13064 507 aaKnown RBP11.53□□□□□ -0.56
C9orf3-214ENST00000473778 PDIA2Q13087 525 aaKnown RBP11.53□□□□□ -0.56
C9orf3-214ENST00000473778 ACVR2BQ13705 512 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 TFDP3Q5H9I0 405 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 FNBP1LQ5T0N5 605 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 ERICH1Q86X53 443 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 TDRPQ86YL5 185 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 ANKRD35Q8N283 1001 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 GBP7Q8N8V2 638 aaPredicted RBP11.53□□□□□ -0.56
C9orf3-214ENST00000473778 JOSD2Q8TAC2 188 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 SLC35B2Q8TB61 432 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 NSMCE1Q8WV22 266 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 UPF1Q92900 1129 aaKnown RBP eCLIP11.53□□□□□ -0.56
C9orf3-214ENST00000473778 KCNN1Q92952 543 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 RBM41Q96IZ5 413 aaKnown RBP11.53□□□□□ -0.56
C9orf3-214ENST00000473778 WRNIP1Q96S55 665 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 VPS37BQ9H9H4 285 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 KLHL14Q9P2G3 628 aa11.53□□□□□ -0.56
C9orf3-214ENST00000473778 FARP1Q9Y4F1 1045 aaPredicted RBP11.53□□□□□ -0.56
C9orf3-214ENST00000473778 H0YCG3 227 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 SGK1O00141 431 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 ALOX15BO15296 676 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 PRPF4O43172 522 aaKnown RBP eCLIP11.52□□□□□ -0.57
C9orf3-214ENST00000473778 MSCO60682 206 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 T-ENOLP0DO92 83 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 EZRP15311 586 aaKnown RBP11.52□□□□□ -0.57
C9orf3-214ENST00000473778 KRT15P19012 456 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 IL9RQ01113 521 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 SLC25A11Q02978 314 aaKnown RBP11.52□□□□□ -0.57
C9orf3-214ENST00000473778 ORC1Q13415 861 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 MORF4L2Q15014 288 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 TAF5Q15542 800 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 TARBP2Q15633 366 aaKnown RBP11.52□□□□□ -0.57
C9orf3-214ENST00000473778 PTPN20Q4JDL3 420 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 PLEKHG4Q58EX7 1191 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 SLFN12LQ6IEE8 588 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 DNAJC24Q6P3W2 148 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 SCYL3Q8IZE3 742 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 SLC7A3Q8WY07 619 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 NKD2Q969F2 451 aaPredicted RBP11.52□□□□□ -0.57
C9orf3-214ENST00000473778 ERP27Q96DN0 273 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 ZNF668Q96K58 619 aaPredicted RBP11.52□□□□□ -0.57
C9orf3-214ENST00000473778 CCDC77Q9BR77 488 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 R3HDMLQ9H3Y0 253 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 IGKV6D-21A0A0A0MT36 114 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 A0A1B0GUA9 196 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 SPDYE16A6NNV3 312 aaPredicted RBP11.52□□□□□ -0.57
C9orf3-214ENST00000473778 ABLIM1O14639 778 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 ITGAVP06756 1048 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 TARSP26639 723 aaKnown RBP11.52□□□□□ -0.57
C9orf3-214ENST00000473778 CLNS1AP54105 237 aaKnown RBP11.52□□□□□ -0.57
C9orf3-214ENST00000473778 TNFAIP1Q13829 316 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 TFDP1Q14186 410 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 DCUN1D2Q6PH85 259 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 CDR2LQ86X02 465 aaPredicted RBP11.52□□□□□ -0.57
C9orf3-214ENST00000473778 BRSK2Q8IWQ3 736 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 MICALL2Q8IY33 904 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 RIBC1Q8N443 379 aaPredicted RBP11.52□□□□□ -0.57
C9orf3-214ENST00000473778 ZNF276Q8N554 614 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 ACTL9Q8TC94 416 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 CPT1BQ92523 772 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 TEX13BQ9BXU2 312 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 XYLT2Q9H1B5 865 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 ACAD9Q9H845 621 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 ETNK1Q9HBU6 452 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 RABGEF1Q9UJ41 708 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 STARD13Q9Y3M8 1113 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 AFG3L2Q9Y4W6 797 aa11.52□□□□□ -0.57
C9orf3-214ENST00000473778 ADCY3O60266 1144 aa11.51□□□□□ -0.57
C9orf3-214ENST00000473778 EDF1O60869 148 aaKnown RBP11.51□□□□□ -0.57
C9orf3-214ENST00000473778 LRCH4O75427 683 aa11.51□□□□□ -0.57
C9orf3-214ENST00000473778 TMEM63AO94886 807 aa11.51□□□□□ -0.57
C9orf3-214ENST00000473778 LDHAP00338 332 aaKnown RBP11.51□□□□□ -0.57
C9orf3-214ENST00000473778 GJB1P08034 283 aa11.51□□□□□ -0.57
C9orf3-214ENST00000473778 GM2AP17900 193 aa11.51□□□□□ -0.57
C9orf3-214ENST00000473778 UBA1P22314 1058 aaKnown RBP11.51□□□□□ -0.57
C9orf3-214ENST00000473778 CA4P22748 312 aa11.51□□□□□ -0.57
C9orf3-214ENST00000473778 ASPAP45381 313 aa11.51□□□□□ -0.57
C9orf3-214ENST00000473778 RAP1GAPP47736 663 aa11.51□□□□□ -0.57
C9orf3-214ENST00000473778 OTUD4Q01804 1114 aaKnown RBP11.51□□□□□ -0.57
C9orf3-214ENST00000473778 PLCB3Q01970 1234 aa11.51□□□□□ -0.57
C9orf3-214ENST00000473778 MCL1Q07820 350 aa11.51□□□□□ -0.57
C9orf3-214ENST00000473778 PDK4Q16654 411 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms