RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 SIT1Q9Y3P8 196 aa19.39■□□□□ 0.69
SNX4-204ENST00000473417 ZNF638Q14966 1978 aaKnown RBP19.39■□□□□ 0.69
SNX4-204ENST00000473417 CACNA1IQ9P0X4 2223 aa19.39■□□□□ 0.69
SNX4-204ENST00000473417 DCNP07585 359 aaKnown RBP19.38■□□□□ 0.69
SNX4-204ENST00000473417 MYL4P12829 197 aa19.38■□□□□ 0.69
SNX4-204ENST00000473417 CCNE1P24864 410 aa19.38■□□□□ 0.69
SNX4-204ENST00000473417 PPP1R2P41236 205 aa19.38■□□□□ 0.69
SNX4-204ENST00000473417 DLG4P78352 724 aa19.38■□□□□ 0.69
SNX4-204ENST00000473417 FAM78AQ5JUQ0 283 aa19.38■□□□□ 0.69
SNX4-204ENST00000473417 TRAPPC11Q7Z392 1133 aa19.38■□□□□ 0.69
SNX4-204ENST00000473417 TMC8Q8IU68 726 aa19.38■□□□□ 0.69
SNX4-204ENST00000473417 FAM186BQ8IYM0 893 aa19.38■□□□□ 0.69
SNX4-204ENST00000473417 TTC9BQ8N6N2 239 aa19.38■□□□□ 0.69
SNX4-204ENST00000473417 TRIML1Q8N9V2 468 aa19.38■□□□□ 0.69
SNX4-204ENST00000473417 CXorf38Q8TB03 319 aa19.38■□□□□ 0.69
SNX4-204ENST00000473417 ZNF516Q92618 1163 aa19.38■□□□□ 0.69
SNX4-204ENST00000473417 BORCS6Q96GS4 357 aa19.38■□□□□ 0.69
SNX4-204ENST00000473417 ZNF560Q96MR9 790 aa19.38■□□□□ 0.69
SNX4-204ENST00000473417 LRRC3Q9BY71 257 aa19.38■□□□□ 0.69
SNX4-204ENST00000473417 HSFX1Q9UBD0 423 aa19.38■□□□□ 0.69
SNX4-204ENST00000473417 R3HCC1Q9Y3T6 440 aaKnown RBP19.38■□□□□ 0.69
SNX4-204ENST00000473417 FRYLO94915 3013 aa19.38■□□□□ 0.69
SNX4-204ENST00000473417 FAM186AA6NE01 2351 aa19.37■□□□□ 0.69
SNX4-204ENST00000473417 ZNF292O60281 2723 aa19.37■□□□□ 0.69
SNX4-204ENST00000473417 KANSL1LA0AUZ9 987 aa19.37■□□□□ 0.69
SNX4-204ENST00000473417 LRRIQ3A6PVS8 624 aaPredicted RBP19.37■□□□□ 0.69
SNX4-204ENST00000473417 KPNA7A9QM74 516 aa19.37■□□□□ 0.69
SNX4-204ENST00000473417 CYB561D2O14569 222 aa19.37■□□□□ 0.69
SNX4-204ENST00000473417 CETN3O15182 167 aa19.37■□□□□ 0.69
SNX4-204ENST00000473417 PSMC2P35998 433 aaKnown RBP19.37■□□□□ 0.69
SNX4-204ENST00000473417 PNPLA4P41247 253 aa19.37■□□□□ 0.69
SNX4-204ENST00000473417 BFSP1Q12934 665 aa19.37■□□□□ 0.69
SNX4-204ENST00000473417 SV2CQ496J9 727 aa19.37■□□□□ 0.69
SNX4-204ENST00000473417 SLC44A4Q53GD3 710 aa19.37■□□□□ 0.69
SNX4-204ENST00000473417 ATAD1Q8NBU5 361 aa19.37■□□□□ 0.69
SNX4-204ENST00000473417 SHKBP1Q8TBC3 707 aa19.37■□□□□ 0.69
SNX4-204ENST00000473417 NELFBQ8WX92 580 aa19.37■□□□□ 0.69
SNX4-204ENST00000473417 SMARCD2Q92925 531 aa19.37■□□□□ 0.69
SNX4-204ENST00000473417 ZCWPW1Q9H0M4 648 aa19.37■□□□□ 0.69
SNX4-204ENST00000473417 ZFP14Q9HCL3 533 aa19.37■□□□□ 0.69
SNX4-204ENST00000473417 CTNND2Q9UQB3 1225 aa19.37■□□□□ 0.69
SNX4-204ENST00000473417 PTPRDP23468 1912 aa19.37■□□□□ 0.69
SNX4-204ENST00000473417 GREB1Q4ZG55 1949 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 PRR23AA6NEV1 266 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 MAPK13O15264 365 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 CST3P01034 146 aaPredicted RBP19.36■□□□□ 0.69
SNX4-204ENST00000473417 GLULP15104 373 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 GJA1P17302 382 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 ALDH1A3P47895 512 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 VAMP7P51809 220 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 EPHB3P54753 998 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 STX17P56962 302 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 FKBP3Q00688 224 aaKnown RBP19.36■□□□□ 0.69
SNX4-204ENST00000473417 LRRC63Q05C16 580 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 ASCL5Q7RTU5 278 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 FRMD5Q7Z6J6 570 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 METTL23Q86XA0 190 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 LRRC52Q8N7C0 313 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 TMC2Q8TDI7 906 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 DNASE1L2Q92874 299 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 ZSWIM3Q96MP5 696 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 TRPV4Q9HBA0 871 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 SLC27A5Q9Y2P5 690 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 ASB3Q9Y575 518 aa19.36■□□□□ 0.69
SNX4-204ENST00000473417 NCANO14594 1321 aa19.35■□□□□ 0.69
SNX4-204ENST00000473417 PHACTR2O75167 634 aa19.35■□□□□ 0.69
SNX4-204ENST00000473417 LRRN2O75325 713 aa19.35■□□□□ 0.69
SNX4-204ENST00000473417 EPB41P11171 864 aaKnown RBP19.35■□□□□ 0.69
SNX4-204ENST00000473417 KRT13P13646 458 aa19.35■□□□□ 0.69
SNX4-204ENST00000473417 CLDN10P78369 228 aa19.35■□□□□ 0.69
SNX4-204ENST00000473417 BIRC3Q13489 604 aa19.35■□□□□ 0.69
SNX4-204ENST00000473417 TEAD2Q15562 447 aa19.35■□□□□ 0.69
SNX4-204ENST00000473417 SLC39A12Q504Y0 691 aa19.35■□□□□ 0.69
SNX4-204ENST00000473417 VITQ6UXI7 678 aa19.35■□□□□ 0.69
SNX4-204ENST00000473417 INTS8Q75QN2 995 aaKnown RBP19.35■□□□□ 0.69
SNX4-204ENST00000473417 ZSCAN18Q8TBC5 510 aaPredicted RBP19.35■□□□□ 0.69
SNX4-204ENST00000473417 PSMG2Q969U7 264 aa19.35■□□□□ 0.69
SNX4-204ENST00000473417 HPDLQ96IR7 371 aa19.35■□□□□ 0.69
SNX4-204ENST00000473417 OSBPL6Q9BZF3 934 aa19.35■□□□□ 0.69
SNX4-204ENST00000473417 GPR88Q9GZN0 384 aa19.35■□□□□ 0.69
SNX4-204ENST00000473417 A0A1W2PRU2 124 aa19.34■□□□□ 0.69
SNX4-204ENST00000473417 SOAT2O75908 522 aa19.34■□□□□ 0.69
SNX4-204ENST00000473417 MBD3O95983 291 aa19.34■□□□□ 0.69
SNX4-204ENST00000473417 TRIM49P0CI25 452 aa19.34■□□□□ 0.69
SNX4-204ENST00000473417 TRIM49CP0CI26 452 aa19.34■□□□□ 0.69
SNX4-204ENST00000473417 AP3M2P53677 418 aa19.34■□□□□ 0.69
SNX4-204ENST00000473417 MYO1EQ12965 1108 aa19.34■□□□□ 0.69
SNX4-204ENST00000473417 PAK1Q13153 545 aa19.34■□□□□ 0.69
SNX4-204ENST00000473417 TRPC3Q13507 836 aa19.34■□□□□ 0.69
SNX4-204ENST00000473417 GRM2Q14416 872 aa19.34■□□□□ 0.69
SNX4-204ENST00000473417 C1orf220Q5T0J3 134 aa19.34■□□□□ 0.69
SNX4-204ENST00000473417 WSCD1Q658N2 575 aa19.34■□□□□ 0.69
SNX4-204ENST00000473417 TPRG1Q6ZUI0 275 aa19.34■□□□□ 0.69
SNX4-204ENST00000473417 ZC3H3Q8IXZ2 948 aaKnown RBP19.34■□□□□ 0.69
SNX4-204ENST00000473417 THEM5Q8N1Q8 247 aa19.34■□□□□ 0.69
SNX4-204ENST00000473417 DEPDC1BQ8WUY9 529 aa19.34■□□□□ 0.69
SNX4-204ENST00000473417 NKD2Q969F2 451 aaPredicted RBP19.34■□□□□ 0.69
SNX4-204ENST00000473417 DUSP9Q99956 384 aaKnown RBP19.34■□□□□ 0.69
SNX4-204ENST00000473417 MKNK1Q9BUB5 465 aa19.34■□□□□ 0.69
SNX4-204ENST00000473417 LTB4R2Q9NPC1 389 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms