RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 COL25A1Q9BXS0 654 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-211ENST00000472490 GTF3C4Q9UKN8 822 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 SLC27A5Q9Y2P5 690 aa15.17■□□□□ 0.02
BRCA1-211ENST00000472490 ZFP37Q9Y6Q3 630 aaPredicted RBP15.17■□□□□ 0.02
BRCA1-211ENST00000472490 PRUNE2Q8WUY3 3088 aa15.16■□□□□ 0.02
BRCA1-211ENST00000472490 MYO7AQ13402 2215 aa15.16■□□□□ 0.02
BRCA1-211ENST00000472490 VWA8A3KMH1 1905 aa15.16■□□□□ 0.02
BRCA1-211ENST00000472490 C19orf67A6NJJ6 358 aa15.16■□□□□ 0.02
BRCA1-211ENST00000472490 LOC730098B7Z3J9 87 aa15.16■□□□□ 0.02
BRCA1-211ENST00000472490 ZNF197O14709 1029 aa15.16■□□□□ 0.02
BRCA1-211ENST00000472490 AFPP02771 609 aaKnown RBP15.16■□□□□ 0.02
BRCA1-211ENST00000472490 FSHRP23945 695 aa15.16■□□□□ 0.02
BRCA1-211ENST00000472490 ASPAP45381 313 aa15.16■□□□□ 0.02
BRCA1-211ENST00000472490 RPL10AP62906 217 aaKnown RBP15.16■□□□□ 0.02
BRCA1-211ENST00000472490 KCNH2Q12809 1159 aa15.16■□□□□ 0.02
BRCA1-211ENST00000472490 TAF12Q16514 161 aa15.16■□□□□ 0.02
BRCA1-211ENST00000472490 SKOR2Q2VWA4 1001 aaPredicted RBP15.16■□□□□ 0.02
BRCA1-211ENST00000472490 SPOPLQ6IQ16 392 aa15.16■□□□□ 0.02
BRCA1-211ENST00000472490 CAVIN1Q6NZI2 390 aaKnown RBP15.16■□□□□ 0.02
BRCA1-211ENST00000472490 SCARA5Q6ZMJ2 495 aa15.16■□□□□ 0.02
BRCA1-211ENST00000472490 B3GALNT2Q8NCR0 500 aa15.16■□□□□ 0.02
BRCA1-211ENST00000472490 MYCBPAPQ8TBZ2 947 aa15.16■□□□□ 0.02
BRCA1-211ENST00000472490 CNOT6LQ96LI5 555 aaKnown RBP15.16■□□□□ 0.02
BRCA1-211ENST00000472490 BCO2Q9BYV7 579 aa15.16■□□□□ 0.02
BRCA1-211ENST00000472490 NAT10Q9H0A0 1025 aaKnown RBP15.16■□□□□ 0.02
BRCA1-211ENST00000472490 SMYD3Q9H7B4 428 aa15.16■□□□□ 0.02
BRCA1-211ENST00000472490 AVENQ9NQS1 362 aaPredicted RBP15.16■□□□□ 0.02
BRCA1-211ENST00000472490 CDH22Q9UJ99 828 aa15.16■□□□□ 0.02
BRCA1-211ENST00000472490 MYBPHLA2RUH7 354 aa15.15■□□□□ 0.02
BRCA1-211ENST00000472490 VNN2O95498 520 aa15.15■□□□□ 0.02
BRCA1-211ENST00000472490 FGF19O95750 216 aa15.15■□□□□ 0.02
BRCA1-211ENST00000472490 RHOP08100 348 aa15.15■□□□□ 0.02
BRCA1-211ENST00000472490 HAPLN1P10915 354 aaPredicted RBP15.15■□□□□ 0.02
BRCA1-211ENST00000472490 PTPN1P18031 435 aaKnown RBP15.15■□□□□ 0.02
BRCA1-211ENST00000472490 TBXAS1P24557 533 aaPredicted RBP15.15■□□□□ 0.02
BRCA1-211ENST00000472490 CDH8P55286 799 aa15.15■□□□□ 0.02
BRCA1-211ENST00000472490 PSMC1P62191 440 aaKnown RBP15.15■□□□□ 0.02
BRCA1-211ENST00000472490 YWHAEP62258 255 aaKnown RBP15.15■□□□□ 0.02
BRCA1-211ENST00000472490 CYP27A1Q02318 531 aa15.15■□□□□ 0.02
BRCA1-211ENST00000472490 VSTM1Q6UX27 236 aa15.15■□□□□ 0.02
BRCA1-211ENST00000472490 PDZD4Q76G19 769 aaPredicted RBP15.15■□□□□ 0.02
BRCA1-211ENST00000472490 ZDHHC14Q8IZN3 488 aa15.15■□□□□ 0.02
BRCA1-211ENST00000472490 ENOX1Q8TC92 643 aaKnown RBP15.15■□□□□ 0.02
BRCA1-211ENST00000472490 FAM200AQ8TCP9 573 aa15.15■□□□□ 0.02
BRCA1-211ENST00000472490 CEP295NLQ96MC4 621 aa15.15■□□□□ 0.02
BRCA1-211ENST00000472490 NECAB3Q96P71 396 aaPredicted RBP15.15■□□□□ 0.02
BRCA1-211ENST00000472490 PKMYT1Q99640 499 aa15.15■□□□□ 0.02
BRCA1-211ENST00000472490 CORO1BQ9BR76 489 aa15.15■□□□□ 0.02
BRCA1-211ENST00000472490 CRISPLD1Q9H336 500 aa15.15■□□□□ 0.02
BRCA1-211ENST00000472490 APOBEC3GQ9HC16 384 aaKnown RBP15.15■□□□□ 0.02
BRCA1-211ENST00000472490 ASAH2Q9NR71 780 aa15.15■□□□□ 0.02
BRCA1-211ENST00000472490 TMEM63CQ9P1W3 806 aa15.15■□□□□ 0.02
BRCA1-211ENST00000472490 DNMT3BQ9UBC3 853 aaKnown RBP15.15■□□□□ 0.02
BRCA1-211ENST00000472490 ATP8B3O60423 1300 aa15.15■□□□□ 0.02
BRCA1-211ENST00000472490 REV3LO60673 3130 aa15.15■□□□□ 0.02
BRCA1-211ENST00000472490 TNFRSF10AO00220 468 aa15.14■□□□□ 0.01
BRCA1-211ENST00000472490 MICAL2O94851 1124 aa15.14■□□□□ 0.01
BRCA1-211ENST00000472490 GBP2P32456 591 aaPredicted RBP15.14■□□□□ 0.01
BRCA1-211ENST00000472490 MAGEA11P43364 429 aa15.14■□□□□ 0.01
BRCA1-211ENST00000472490 MTIF2P46199 727 aaKnown RBP15.14■□□□□ 0.01
BRCA1-211ENST00000472490 RAP1GAPP47736 663 aa15.14■□□□□ 0.01
BRCA1-211ENST00000472490 INCA1Q0VD86 236 aa15.14■□□□□ 0.01
BRCA1-211ENST00000472490 SEMA4DQ92854 862 aa15.14■□□□□ 0.01
BRCA1-211ENST00000472490 PSMG2Q969U7 264 aa15.14■□□□□ 0.01
BRCA1-211ENST00000472490 PCED1BQ96HM7 432 aa15.14■□□□□ 0.01
BRCA1-211ENST00000472490 NT5C1BQ96P26 610 aa15.14■□□□□ 0.01
BRCA1-211ENST00000472490 MED15Q96RN5 788 aa15.14■□□□□ 0.01
BRCA1-211ENST00000472490 NT5C1AQ9BXI3 368 aa15.14■□□□□ 0.01
BRCA1-211ENST00000472490 ELOVL4Q9GZR5 314 aa15.14■□□□□ 0.01
BRCA1-211ENST00000472490 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.14■□□□□ 0.01
BRCA1-211ENST00000472490 TMLHEQ9NVH6 421 aa15.14■□□□□ 0.01
BRCA1-211ENST00000472490 EHD2Q9NZN4 543 aa15.14■□□□□ 0.01
BRCA1-211ENST00000472490 CEP72Q9P209 647 aa15.14■□□□□ 0.01
BRCA1-211ENST00000472490 MRPS23Q9Y3D9 190 aaKnown RBP15.14■□□□□ 0.01
BRCA1-211ENST00000472490 UNC80Q8N2C7 3258 aa15.14■□□□□ 0.01
BRCA1-211ENST00000472490 TRIM66O15016 1216 aa15.13■□□□□ 0.01
BRCA1-211ENST00000472490 ATP2C2O75185 946 aa15.13■□□□□ 0.01
BRCA1-211ENST00000472490 TPM2P07951 284 aa15.13■□□□□ 0.01
BRCA1-211ENST00000472490 CSH1P0DML2 217 aa15.13■□□□□ 0.01
BRCA1-211ENST00000472490 CSH2P0DML3 217 aa15.13■□□□□ 0.01
BRCA1-211ENST00000472490 SP100P23497 879 aaPredicted RBP15.13■□□□□ 0.01
BRCA1-211ENST00000472490 NDST1P52848 882 aa15.13■□□□□ 0.01
BRCA1-211ENST00000472490 MDH1BQ5I0G3 518 aa15.13■□□□□ 0.01
BRCA1-211ENST00000472490 GET4Q7L5D6 327 aaPredicted RBP15.13■□□□□ 0.01
BRCA1-211ENST00000472490 DNAJB7Q7Z6W7 309 aaPredicted RBP15.13■□□□□ 0.01
BRCA1-211ENST00000472490 CRYBG2Q8N1P7 616 aa15.13■□□□□ 0.01
BRCA1-211ENST00000472490 MYLPFQ96A32 169 aa15.13■□□□□ 0.01
BRCA1-211ENST00000472490 SDCBP2Q9H190 292 aa15.13■□□□□ 0.01
BRCA1-211ENST00000472490 CRTAC1Q9NQ79 661 aa15.13■□□□□ 0.01
BRCA1-211ENST00000472490 SPTBN5Q9NRC6 3674 aaKnown RBP15.13■□□□□ 0.01
BRCA1-211ENST00000472490 HCFC1R1Q9NWW0 138 aa15.13■□□□□ 0.01
BRCA1-211ENST00000472490 CDH7Q9ULB5 785 aa15.13■□□□□ 0.01
BRCA1-211ENST00000472490 NFE2L3Q9Y4A8 694 aa15.13■□□□□ 0.01
BRCA1-211ENST00000472490 SCN1AP35498 2009 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 PLXNA3P51805 1871 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 C2CD4DB7Z1M9 353 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 DLL1O00548 723 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 HCRTO43612 131 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 CILPO75339 1184 aa15.12■□□□□ 0.01
BRCA1-211ENST00000472490 CD58P19256 250 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms