RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 GSDMDP57764 484 aa17.92■□□□□ 0.46
CCM2-205ENST00000472223 PSMC1P62191 440 aaKnown RBP17.92■□□□□ 0.46
CCM2-205ENST00000472223 GPR17Q13304 367 aa17.92■□□□□ 0.46
CCM2-205ENST00000472223 ORC1Q13415 861 aa17.92■□□□□ 0.46
CCM2-205ENST00000472223 MDH1BQ5I0G3 518 aa17.92■□□□□ 0.46
CCM2-205ENST00000472223 TPGS2Q68CL5 300 aa17.92■□□□□ 0.46
CCM2-205ENST00000472223 SLC8B1Q6J4K2 584 aa17.92■□□□□ 0.46
CCM2-205ENST00000472223 VPS36Q86VN1 386 aa17.92■□□□□ 0.46
CCM2-205ENST00000472223 GLYCTKQ8IVS8 523 aa17.92■□□□□ 0.46
CCM2-205ENST00000472223 SLC4A11Q8NBS3 891 aa17.92■□□□□ 0.46
CCM2-205ENST00000472223 CYFIP2Q96F07 1278 aa17.92■□□□□ 0.46
CCM2-205ENST00000472223 GAS2L1Q99501 681 aaPredicted RBP17.92■□□□□ 0.46
CCM2-205ENST00000472223 ELOVL4Q9GZR5 314 aa17.92■□□□□ 0.46
CCM2-205ENST00000472223 LMCD1Q9NZU5 365 aa17.92■□□□□ 0.46
CCM2-205ENST00000472223 AJAP1Q9UKB5 411 aaPredicted RBP17.92■□□□□ 0.46
CCM2-205ENST00000472223 GTF3C4Q9UKN8 822 aa17.92■□□□□ 0.46
CCM2-205ENST00000472223 MAFFQ9ULX9 164 aa17.92■□□□□ 0.46
CCM2-205ENST00000472223 CEP83Q9Y592 693 aa17.92■□□□□ 0.46
CCM2-205ENST00000472223 PCDHB5Q9Y5E4 795 aa17.92■□□□□ 0.46
CCM2-205ENST00000472223 TSC2P49815 1807 aa17.92■□□□□ 0.46
CCM2-205ENST00000472223 LAMA2P24043 3122 aaKnown RBP17.92■□□□□ 0.46
CCM2-205ENST00000472223 RANBP2P49792 3224 aaKnown RBP17.92■□□□□ 0.46
CCM2-205ENST00000472223 C2orf71A6NGG8 1288 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 FSCN2O14926 492 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 TEX28O15482 410 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 NRDCO43847 1150 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 CNPP09543 421 aaKnown RBP17.91■□□□□ 0.46
CCM2-205ENST00000472223 RPL17P18621 184 aaKnown RBP17.91■□□□□ 0.46
CCM2-205ENST00000472223 FXR1P51114 621 aaKnown RBP eCLIP17.91■□□□□ 0.46
CCM2-205ENST00000472223 KLHL30Q0D2K2 578 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 TBX2Q13207 712 aaPredicted RBP17.91■□□□□ 0.46
CCM2-205ENST00000472223 RAB33AQ14088 237 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 GPR153Q6NV75 609 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 ZNF677Q86XU0 584 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 OR10T2Q8NGX3 314 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 ZNF461Q8TAF7 563 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 SPPL2BQ8TCT7 592 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 WHAMMQ8TF30 809 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 BAP1Q92560 729 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 KLHL5Q96PQ7 755 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 RTP3Q9BQQ7 232 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 CLSTN3Q9BQT9 956 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 DPEP3Q9H4B8 488 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 PRDM12Q9H4Q4 367 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 TLE6Q9H808 572 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 AIPL1Q9NZN9 384 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 HMGXB4Q9UGU5 601 aa17.91■□□□□ 0.46
CCM2-205ENST00000472223 TRIOBPQ9H2D6 2365 aa17.9■□□□□ 0.46
CCM2-205ENST00000472223 MYBPHLA2RUH7 354 aa17.9■□□□□ 0.46
CCM2-205ENST00000472223 SPDYE4A6NLX3 237 aa17.9■□□□□ 0.46
CCM2-205ENST00000472223 RNF225M0QZC1 329 aaPredicted RBP17.9■□□□□ 0.46
CCM2-205ENST00000472223 RFXAPO00287 272 aa17.9■□□□□ 0.46
CCM2-205ENST00000472223 TBC1D4O60343 1298 aa17.9■□□□□ 0.46
CCM2-205ENST00000472223 LILRB3O75022 631 aa17.9■□□□□ 0.46
CCM2-205ENST00000472223 MFAP3LO75121 409 aa17.9■□□□□ 0.46
CCM2-205ENST00000472223 ATP2C2O75185 946 aa17.9■□□□□ 0.46
CCM2-205ENST00000472223 PTMAP06454 111 aaKnown RBP17.9■□□□□ 0.46
CCM2-205ENST00000472223 ADKP55263 362 aaKnown RBP17.9■□□□□ 0.46
CCM2-205ENST00000472223 ROR1Q01973 937 aa17.9■□□□□ 0.46
CCM2-205ENST00000472223 TDRD12Q587J7 1177 aaKnown RBP17.9■□□□□ 0.46
CCM2-205ENST00000472223 FAM171BQ6P995 826 aa17.9■□□□□ 0.46
CCM2-205ENST00000472223 PALB2Q86YC2 1186 aa17.9■□□□□ 0.46
CCM2-205ENST00000472223 FUBP3Q96I24 572 aaKnown RBP eCLIP17.9■□□□□ 0.46
CCM2-205ENST00000472223 TWNKQ96RR1 684 aa17.9■□□□□ 0.46
CCM2-205ENST00000472223 CDCA3Q99618 268 aaPredicted RBP17.9■□□□□ 0.46
CCM2-205ENST00000472223 GPR88Q9GZN0 384 aa17.9■□□□□ 0.46
CCM2-205ENST00000472223 FAM49BQ9NUQ9 324 aa17.9■□□□□ 0.46
CCM2-205ENST00000472223 AFF4Q9UHB7 1163 aaKnown RBP17.9■□□□□ 0.46
CCM2-205ENST00000472223 MYO9BQ13459 2157 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 HIDE1A8MVS5 230 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 PRRG1O14668 218 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 HCRTO43612 131 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 GLUD1P00367 558 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 C1RP00736 705 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 SERPING1P05155 500 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 OR4Q2P0C623 313 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 PNMA6AP0CW24 399 aaPredicted RBP17.89■□□□□ 0.45
CCM2-205ENST00000472223 SRGAP2BP0DMP2 458 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 CYP11B1P15538 503 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 CLCN1P35523 988 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 IRS1P35568 1242 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 TUFMP49411 452 aaKnown RBP17.89■□□□□ 0.45
CCM2-205ENST00000472223 ZNF132P52740 706 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 CNGA2Q16280 664 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 HABP4Q5JVS0 413 aaKnown RBP17.89■□□□□ 0.45
CCM2-205ENST00000472223 SLC47A2Q86VL8 602 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 C12orf29Q8N999 325 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 ZNF606Q8WXB4 792 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 MYLPFQ96A32 169 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 PGLYRP2Q96PD5 576 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 DEF6Q9H4E7 631 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 NSUN3Q9H649 340 aaKnown RBP17.89■□□□□ 0.45
CCM2-205ENST00000472223 ABCB6Q9NP58 842 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 CRTAC1Q9NQ79 661 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 ABHD10Q9NUJ1 306 aa17.89■□□□□ 0.45
CCM2-205ENST00000472223 SEPT11Q9NVA2 429 aaKnown RBP17.89■□□□□ 0.45
CCM2-205ENST00000472223 ABI2Q9NYB9 513 aaPredicted RBP17.89■□□□□ 0.45
CCM2-205ENST00000472223 EPOPA6NHQ4 379 aa17.88■□□□□ 0.45
CCM2-205ENST00000472223 FAM200BP0CF97 657 aa17.88■□□□□ 0.45
CCM2-205ENST00000472223 ATF2P15336 505 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms