RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 PARK7Q99497 189 aaKnown RBP13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 RSPH9Q9H1X1 276 aaPredicted RBP13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 EPC1Q9H2F5 836 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 AAASQ9NRG9 546 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CDC40O60508 579 aaKnown RBP eCLIP13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 AKR1B1P15121 316 aa13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ZNF24P17028 368 aa13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PLA2G4AP47712 749 aa13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 DGKDQ16760 1214 aa13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PGS1Q32NB8 556 aa13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CAPRIN2Q6IMN6 1127 aaKnown RBP13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MPP6Q9NZW5 540 aa13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 SPACA6W5XKT8 324 aa13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 SCARF1Q14162 830 aa13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 LPIN1Q14693 890 aa13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 AKAP7Q9P0M2 348 aaPredicted RBP13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 LOC102724159A0A0B4J2E5 919 aa13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 TRIM64A6NGJ6 449 aa13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ZNF185O15231 689 aa13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 GH1P01241 217 aa13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 EFNA5P52803 228 aa13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PWP2Q15269 919 aaKnown RBP13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 LONRF1Q17RB8 773 aa13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 GOLGA7BQ2TAP0 167 aa13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 WDCPQ9H6R7 721 aa13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 GPR108Q9NPR9 543 aa13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 GID8Q9NWU2 228 aa13.77□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PLXNC1O60486 1568 aa13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 FAM135BQ49AJ0 1406 aa13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 GUCY1A3Q02108 690 aa13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 ZNF177Q13360 481 aaPredicted RBP13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 STARD3Q14849 445 aa13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 IPCEF1Q8WWN9 437 aaPredicted RBP13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 GFM2Q969S9 779 aaKnown RBP13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 NUDT12Q9BQG2 462 aa13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 SCGNO76038 276 aa13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 KCNV1Q6PIU1 500 aa13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 RNPC3Q96LT9 517 aaKnown RBP13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 RNPEPQ9H4A4 650 aa13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 CPDO75976 1380 aa13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 ATMINO43313 823 aaPredicted RBP13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 TSC22D2O75157 780 aa13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 TAP1Q03518 808 aa13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 SEZ6Q53EL9 994 aa13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 AKIRIN2Q53H80 203 aa13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 MTHFD1LQ6UB35 978 aa13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 KLF6Q99612 283 aaPredicted RBP13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 NT5C1AQ9BXI3 368 aa13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 BARHL2Q9NY43 387 aa13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 KDM5DQ9BY66 1539 aa13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 H2AFYO75367 372 aaKnown RBP13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 DDI1Q8WTU0 396 aa13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 TAF1DQ9H5J8 278 aaPredicted RBP13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 MAST1Q9Y2H9 1570 aa13.77□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 TRIM13O60858 407 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 RGS2P41220 211 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 VSNL1P62760 191 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 DNAJC3Q13217 504 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 SENP7Q9BQF6 1050 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 TEX13BQ9BXU2 312 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 TRABDQ9H4I3 376 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 DCDC2Q9UHG0 476 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 CDYLQ9Y232 598 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 SPEF1Q9Y4P9 236 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 MBL2P11226 248 aaPredicted RBP13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 CDC27P30260 824 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 MROH9Q5TGP6 573 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 NACC2Q96BF6 587 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 TUFT1Q9NNX1 390 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 SYBUQ9NX95 663 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 KRT33AO76009 404 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 EPHB2P29323 1055 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 EPC2Q52LR7 807 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 RGL4Q8IZJ4 473 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 PNMA5Q96PV4 448 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 PCDHGA3Q9Y5H0 932 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 LOC100653049A0A140TA62 436 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 XPO1O14980 1071 aaKnown RBP13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 KRT34O76011 436 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 KRT6AP02538 564 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 KRT6BP04259 564 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 FAM200BP0CF97 657 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 PCSK1P29120 753 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 KRT6CP48668 564 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 TTC39CQ8N584 583 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 AGPAT1Q99943 283 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 SIKE1Q9BRV8 207 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 MOV10L1Q9BXT6 1211 aaKnown RBP13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 RPS6KB2Q9UBS0 482 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 GCC2Q8IWJ2 1684 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 STRNO43815 780 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 CD4P01730 458 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 MYBL1P10243 752 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 RANBP1P43487 201 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 MICU2Q8IYU8 434 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 CNPY4Q8N129 248 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 PCYOX1LQ8NBM8 494 aa13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 RPRD1AQ96P16 312 aaPredicted RBP13.76□□□□□ -0.21
NPHP3-ACAD11-201ENST00000471702 PRR12Q9ULL5 1215 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms