RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 LMBRD1Q9NUN5 540 aa4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 MRPS18AQ9NVS2 196 aaKnown RBP4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 PNPOQ9NVS9 261 aa4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 SMIM22K7EJ46 135 aa4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 PDHA1P08559 390 aa4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 JUPP14923 745 aa4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 MPGP29372 298 aa4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 RECQLP46063 649 aaPredicted RBP4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 CDKN1CP49918 316 aaPredicted RBP4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 EVA1CP58658 441 aa4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 TUBA4AP68366 448 aa4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 SSBP2P81877 361 aaPredicted RBP4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 TCF15Q12870 199 aa4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 PROSER3Q2NL68 480 aa4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 PRAMEF17Q5VTA0 474 aa4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 ZNF626Q68DY1 528 aa4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 USP45Q70EL2 814 aa4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 BHLHA9Q7RTU4 235 aa4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 FAM109AQ8N4B1 249 aa4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 PRPF38AQ8NAV1 312 aaKnown RBP4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 FAM167AQ96KS9 214 aa4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 SERGEFQ9UGK8 458 aa4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 CCNL1Q9UK58 526 aaPredicted RBP4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 PCDHA1Q9Y5I3 950 aa4.44□□□□□ -1.7
PRPF40A-207ENST00000471701 H3BUI4 141 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 PPP6CO00743 305 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 BMP15O95972 392 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 TYRP14679 529 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 CTGFP29279 349 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 EPHB2P29323 1055 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 TOB1P50616 345 aaPredicted RBP4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 SATB1Q01826 763 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 IQCB1Q15051 598 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 TBC1D25Q3MII6 688 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 LONRF3Q496Y0 759 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 TREML2Q5T2D2 321 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 SLC9A4Q6AI14 798 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 C11orf87Q6NUJ2 197 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 PARS2Q7L3T8 475 aaKnown RBP4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 PPP1R32Q7Z5V6 425 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 YTHDF3Q7Z739 585 aaKnown RBP4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 NEK8Q86SG6 692 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 PRR18Q8N4B5 295 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 Q8N9P0 234 aaPredicted RBP4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 DENND1AQ8TEH3 1009 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 SLC46A1Q96NT5 459 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 MOGAT1Q96PD6 335 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 FCRL4Q96PJ5 515 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 TTYH3Q9C0H2 523 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 SERHLQ9NQF3 203 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 DLL3Q9NYJ7 618 aa4.43□□□□□ -1.7
PRPF40A-207ENST00000471701 KRTAP29-1A8MX34 341 aaPredicted RBP4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 PRRT4C9JH25 899 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 IKBKBO14920 756 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 IL33O95760 270 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 LATS1O95835 1130 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 AHSGP02765 367 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 TUBB4AP04350 444 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 POU2F2P09086 479 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 ATXN1LP0C7T5 689 aaKnown RBP4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 KCNJ5P48544 419 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 PXNP49023 591 aaPredicted RBP4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 HOXA4Q00056 320 aaPredicted RBP4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 AMPD3Q01432 767 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 E2F2Q14209 437 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 MORN5Q5VZ52 161 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 SLC18B1Q6NT16 456 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 PPP1R3BQ86XI6 285 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 LRRC71Q8N4P6 559 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 PCSK9Q8NBP7 692 aaKnown RBP4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 BRIX1Q8TDN6 353 aaKnown RBP4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 SMAD5Q99717 465 aaKnown RBP4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 PTDSS2Q9BVG9 487 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 HESX1Q9UBX0 185 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 SERTAD3Q9UJW9 196 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 SH2B3Q9UQQ2 575 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 BTBD3Q9Y2F9 522 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 ZNF521Q96K83 1311 aa4.42□□□□□ -1.7
PRPF40A-207ENST00000471701 H0YIZ8 118 aa4.41□□□□□ -1.7
PRPF40A-207ENST00000471701 DNAJB5O75953 348 aa4.41□□□□□ -1.7
PRPF40A-207ENST00000471701 ZRANB2O95218 330 aaKnown RBP eCLIP4.41□□□□□ -1.7
PRPF40A-207ENST00000471701 ENGP17813 658 aa4.41□□□□□ -1.7
PRPF40A-207ENST00000471701 MAP2K6P52564 334 aa4.41□□□□□ -1.7
PRPF40A-207ENST00000471701 LOXL3P58215 753 aa4.41□□□□□ -1.7
PRPF40A-207ENST00000471701 BOP1Q14137 746 aaKnown RBP4.41□□□□□ -1.7
PRPF40A-207ENST00000471701 PGS1Q32NB8 556 aa4.41□□□□□ -1.7
PRPF40A-207ENST00000471701 REPS1Q96D71 796 aa4.41□□□□□ -1.7
PRPF40A-207ENST00000471701 QTRT1Q9BXR0 403 aaKnown RBP4.41□□□□□ -1.7
PRPF40A-207ENST00000471701 GLOD4Q9HC38 313 aa4.41□□□□□ -1.7
PRPF40A-207ENST00000471701 SARS2Q9NP81 518 aaKnown RBP4.41□□□□□ -1.7
PRPF40A-207ENST00000471701 DUSP22Q9NRW4 184 aa4.41□□□□□ -1.7
PRPF40A-207ENST00000471701 TBC1D30Q9Y2I9 924 aa4.41□□□□□ -1.7
PRPF40A-207ENST00000471701 ZNF213O14771 459 aa4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 IGKV2-30P06310 120 aa4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 IL6RP08887 468 aaPredicted RBP4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 NPSP0C0P6 89 aa4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 PIM1P11309 404 aaPredicted RBP4.4□□□□□ -1.71
PRPF40A-207ENST00000471701 HDCP19113 662 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms