RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 A8MXQ7 604 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 HCRTO43612 131 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 FSHRP23945 695 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 SSTR3P32745 418 aaPredicted RBP16.32■□□□□ 0.2
SDC3-203ENST00000471567 KCNH2Q12809 1159 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 KLHL40Q2TBA0 621 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 MGAT5BQ3V5L5 792 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 CFAP221Q4G0U5 840 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 SCARA5Q6ZMJ2 495 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 UNC93AQ86WB7 457 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 IRF2BP1Q8IU81 584 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 SPATA2LQ8IUW3 424 aaPredicted RBP16.32■□□□□ 0.2
SDC3-203ENST00000471567 FAM114A1Q8IWE2 563 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 ZDHHC14Q8IZN3 488 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 TTC39CQ8N584 583 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 LEMD2Q8NC56 503 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 MYCBPAPQ8TBZ2 947 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 ELMO3Q96BJ8 720 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 ACSF2Q96CM8 615 aaPredicted RBP16.32■□□□□ 0.2
SDC3-203ENST00000471567 CNOT6LQ96LI5 555 aaKnown RBP16.32■□□□□ 0.2
SDC3-203ENST00000471567 SDCBP2Q9H190 292 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 FAM124BQ9H5Z6 455 aaPredicted RBP16.32■□□□□ 0.2
SDC3-203ENST00000471567 CRTAC1Q9NQ79 661 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 ABI2Q9NYB9 513 aaPredicted RBP16.32■□□□□ 0.2
SDC3-203ENST00000471567 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.32■□□□□ 0.2
SDC3-203ENST00000471567 CEP72Q9P209 647 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 NME7Q9Y5B8 376 aa16.32■□□□□ 0.2
SDC3-203ENST00000471567 ATP2C2O75185 946 aa16.31■□□□□ 0.2
SDC3-203ENST00000471567 LRRN2O75325 713 aa16.31■□□□□ 0.2
SDC3-203ENST00000471567 AFPP02771 609 aaKnown RBP16.31■□□□□ 0.2
SDC3-203ENST00000471567 RHOP08100 348 aa16.31■□□□□ 0.2
SDC3-203ENST00000471567 PTPN1P18031 435 aaKnown RBP16.31■□□□□ 0.2
SDC3-203ENST00000471567 MAGEA11P43364 429 aa16.31■□□□□ 0.2
SDC3-203ENST00000471567 RAP1GAPP47736 663 aa16.31■□□□□ 0.2
SDC3-203ENST00000471567 PSMC1P62191 440 aaKnown RBP16.31■□□□□ 0.2
SDC3-203ENST00000471567 INCA1Q0VD86 236 aa16.31■□□□□ 0.2
SDC3-203ENST00000471567 STX1AQ16623 288 aa16.31■□□□□ 0.2
SDC3-203ENST00000471567 PABPC1LQ4VXU2 614 aaKnown RBP16.31■□□□□ 0.2
SDC3-203ENST00000471567 ITIH5Q86UX2 942 aa16.31■□□□□ 0.2
SDC3-203ENST00000471567 TTC9BQ8N6N2 239 aa16.31■□□□□ 0.2
SDC3-203ENST00000471567 TDRD5Q8NAT2 981 aaKnown RBP16.31■□□□□ 0.2
SDC3-203ENST00000471567 ENOX1Q8TC92 643 aaKnown RBP16.31■□□□□ 0.2
SDC3-203ENST00000471567 TNIP3Q96KP6 325 aa16.31■□□□□ 0.2
SDC3-203ENST00000471567 SEPT5Q99719 369 aaPredicted RBP16.31■□□□□ 0.2
SDC3-203ENST00000471567 CD320Q9NPF0 282 aa16.31■□□□□ 0.2
SDC3-203ENST00000471567 HCFC1R1Q9NWW0 138 aa16.31■□□□□ 0.2
SDC3-203ENST00000471567 MAGEC2Q9UBF1 373 aaPredicted RBP16.31■□□□□ 0.2
SDC3-203ENST00000471567 ZFP37Q9Y6Q3 630 aaPredicted RBP16.31■□□□□ 0.2
SDC3-203ENST00000471567 A0A0C4DFX4 3053 aa16.31■□□□□ 0.2
SDC3-203ENST00000471567 DENND4AQ7Z401 1863 aa16.31■□□□□ 0.2
SDC3-203ENST00000471567 C2CD4DB7Z1M9 353 aa16.3■□□□□ 0.2
SDC3-203ENST00000471567 TNFRSF10AO00220 468 aa16.3■□□□□ 0.2
SDC3-203ENST00000471567 ZNF197O14709 1029 aa16.3■□□□□ 0.2
SDC3-203ENST00000471567 MICAL2O94851 1124 aa16.3■□□□□ 0.2
SDC3-203ENST00000471567 TRIM21P19474 475 aaKnown RBP16.3■□□□□ 0.2
SDC3-203ENST00000471567 EPHA5P54756 1037 aa16.3■□□□□ 0.2
SDC3-203ENST00000471567 RPL10AP62906 217 aaKnown RBP16.3■□□□□ 0.2
SDC3-203ENST00000471567 NTHL1P78549 312 aa16.3■□□□□ 0.2
SDC3-203ENST00000471567 VEPH1Q14D04 833 aa16.3■□□□□ 0.2
SDC3-203ENST00000471567 CYP4A22Q5TCH4 519 aa16.3■□□□□ 0.2
SDC3-203ENST00000471567 CAVIN1Q6NZI2 390 aaKnown RBP16.3■□□□□ 0.2
SDC3-203ENST00000471567 VSTM1Q6UX27 236 aa16.3■□□□□ 0.2
SDC3-203ENST00000471567 CRYBG2Q8N1P7 616 aa16.3■□□□□ 0.2
SDC3-203ENST00000471567 B3GALNT2Q8NCR0 500 aa16.3■□□□□ 0.2
SDC3-203ENST00000471567 PSMG2Q969U7 264 aa16.3■□□□□ 0.2
SDC3-203ENST00000471567 MYLPFQ96A32 169 aa16.3■□□□□ 0.2
SDC3-203ENST00000471567 CORO1BQ9BR76 489 aa16.3■□□□□ 0.2
SDC3-203ENST00000471567 DNAI2Q9GZS0 605 aa16.3■□□□□ 0.2
SDC3-203ENST00000471567 DNAJC25Q9H1X3 360 aa16.3■□□□□ 0.2
SDC3-203ENST00000471567 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.3■□□□□ 0.21e-6■■■■■ 172.3
SDC3-203ENST00000471567 DLL1O00548 723 aa16.29■□□□□ 0.2
SDC3-203ENST00000471567 SOAT2O75908 522 aa16.29■□□□□ 0.2
SDC3-203ENST00000471567 LETM1O95202 739 aaPredicted RBP16.29■□□□□ 0.2
SDC3-203ENST00000471567 PRKCSHP14314 528 aaPredicted RBP16.29■□□□□ 0.2
SDC3-203ENST00000471567 CYP2F1P24903 491 aa16.29■□□□□ 0.2
SDC3-203ENST00000471567 GBP2P32456 591 aaPredicted RBP16.29■□□□□ 0.2
SDC3-203ENST00000471567 NDST1P52848 882 aa16.29■□□□□ 0.2
SDC3-203ENST00000471567 MDH1BQ5I0G3 518 aa16.29■□□□□ 0.2
SDC3-203ENST00000471567 PDZD4Q76G19 769 aaPredicted RBP16.29■□□□□ 0.2
SDC3-203ENST00000471567 DNAJB7Q7Z6W7 309 aaPredicted RBP16.29■□□□□ 0.2
SDC3-203ENST00000471567 CREBRFQ8IUR6 639 aa16.29■□□□□ 0.2
SDC3-203ENST00000471567 TATDN2Q93075 761 aa16.29■□□□□ 0.2
SDC3-203ENST00000471567 PCED1BQ96HM7 432 aa16.29■□□□□ 0.2
SDC3-203ENST00000471567 CEP295NLQ96MC4 621 aa16.29■□□□□ 0.2
SDC3-203ENST00000471567 DPEP3Q9H4B8 488 aa16.29■□□□□ 0.2
SDC3-203ENST00000471567 ASAH2Q9NR71 780 aa16.29■□□□□ 0.2
SDC3-203ENST00000471567 EPS15L1Q9UBC2 864 aa16.29■□□□□ 0.2
SDC3-203ENST00000471567 MRPS23Q9Y3D9 190 aaKnown RBP16.29■□□□□ 0.2
SDC3-203ENST00000471567 CILPO75339 1184 aa16.28■□□□□ 0.2
SDC3-203ENST00000471567 FGF19O95750 216 aa16.28■□□□□ 0.2
SDC3-203ENST00000471567 ATF6P18850 670 aa16.28■□□□□ 0.2
SDC3-203ENST00000471567 SP100P23497 879 aaPredicted RBP16.28■□□□□ 0.2
SDC3-203ENST00000471567 TBXAS1P24557 533 aaPredicted RBP16.28■□□□□ 0.2
SDC3-203ENST00000471567 MTIF2P46199 727 aaKnown RBP16.28■□□□□ 0.2
SDC3-203ENST00000471567 CYP27A1Q02318 531 aa16.28■□□□□ 0.2
SDC3-203ENST00000471567 CCDC142Q17RM4 750 aa16.28■□□□□ 0.2
SDC3-203ENST00000471567 SKOR2Q2VWA4 1001 aaPredicted RBP16.28■□□□□ 0.2
SDC3-203ENST00000471567 PRSS36Q5K4E3 855 aa16.28■□□□□ 0.2
SDC3-203ENST00000471567 GET4Q7L5D6 327 aaPredicted RBP16.28■□□□□ 0.2
SDC3-203ENST00000471567 RNF135Q8IUD6 432 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms