RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 KDSRQ06136 332 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 C19orf57Q0VDD7 668 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 SCRN1Q12765 414 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 NOLC1Q14978 699 aaKnown RBP eCLIP7.45□□□□□ -1.22
HDAC1-204ENST00000471488 TRIP6Q15654 476 aaKnown RBP7.45□□□□□ -1.22
HDAC1-204ENST00000471488 ZNF174Q15697 407 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 ZNF423Q2M1K9 1284 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 SLC10A6Q3KNW5 377 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 XKR4Q5GH76 650 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 BMP2KLQ5H9B9 411 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 EFCAB13Q8IY85 973 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 RGL4Q8IZJ4 473 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 THEM5Q8N1Q8 247 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 ALLCQ8N6M5 410 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 TXNDC5Q8NBS9 432 aaKnown RBP7.45□□□□□ -1.22
HDAC1-204ENST00000471488 BEST2Q8NFU1 509 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 RIN3Q8TB24 985 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 WHAMMQ8TF30 809 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 WASF1Q92558 559 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 ZNF274Q96GC6 653 aaPredicted RBP7.45□□□□□ -1.22
HDAC1-204ENST00000471488 CRELD1Q96HD1 420 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 SENP8Q96LD8 212 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 CYP2S1Q96SQ9 504 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 PI4K2AQ9BTU6 479 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 OXCT2Q9BYC2 517 aaPredicted RBP7.45□□□□□ -1.22
HDAC1-204ENST00000471488 AGXT2Q9BYV1 514 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 KIF9Q9HAQ2 790 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 POLMQ9NP87 494 aaPredicted RBP7.45□□□□□ -1.22
HDAC1-204ENST00000471488 PDRG1Q9NUG6 133 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 DDX19AQ9NUU7 478 aaKnown RBP7.45□□□□□ -1.22
HDAC1-204ENST00000471488 EVLQ9UI08 416 aaPredicted RBP7.45□□□□□ -1.22
HDAC1-204ENST00000471488 KIAA1024Q9UPX6 916 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 NUP205Q92621 2012 aa7.45□□□□□ -1.22
HDAC1-204ENST00000471488 ADAMTS9Q9P2N4 1935 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 ZNF638Q14966 1978 aaKnown RBP7.44□□□□□ -1.22
HDAC1-204ENST00000471488 ITPR1Q14643 2758 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 TRAV19A0A0A6YYK7 116 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 TCRBV21S2A2A0A5A6 115 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 LACTBL1A8MY62 500 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 TNFRSF10BO14763 440 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 CLDN3O15551 220 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 XPOTO43592 962 aaKnown RBP7.44□□□□□ -1.22
HDAC1-204ENST00000471488 ABL1P00519 1130 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 FTH1P19P0C7X4 201 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 WEE1P30291 646 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 TNFSF9P41273 254 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 NLRP12P59046 1061 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 SEMA3BQ13214 749 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 GNL2Q13823 731 aaKnown RBP7.44□□□□□ -1.22
HDAC1-204ENST00000471488 MYBPC2Q14324 1141 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 KCNB1Q14721 858 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 DUOXA1Q1HG43 343 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 HAUS3Q68CZ6 603 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 MARCH9Q86YJ5 346 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 DIS3L2Q8IYB7 885 aaKnown RBP7.44□□□□□ -1.22
HDAC1-204ENST00000471488 FAM177A1Q8N128 213 aaPredicted RBP7.44□□□□□ -1.22
HDAC1-204ENST00000471488 OR10T2Q8NGX3 314 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 CCDC26Q8TAB7 109 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 ADAM32Q8TC27 787 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 USP33Q8TEY7 942 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 SETD7Q8WTS6 366 aaKnown RBP7.44□□□□□ -1.22
HDAC1-204ENST00000471488 OSCP1Q8WVF1 389 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 EZH1Q92800 747 aaPredicted RBP7.44□□□□□ -1.22
HDAC1-204ENST00000471488 CNOT6LQ96LI5 555 aaKnown RBP7.44□□□□□ -1.22
HDAC1-204ENST00000471488 FNBP1Q96RU3 617 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 ARID3AQ99856 593 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 PYM1Q9BRP8 204 aaKnown RBP7.44□□□□□ -1.22
HDAC1-204ENST00000471488 LINC00597Q9H2U6 94 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 IL21Q9HBE4 155 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 UBQLN1Q9UMX0 589 aaKnown RBP7.44□□□□□ -1.22
HDAC1-204ENST00000471488 SLC6A14Q9UN76 642 aa7.44□□□□□ -1.22
HDAC1-204ENST00000471488 E9PMD0 336 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 CYB561D2O14569 222 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 ZBTB24O43167 697 aaPredicted RBP7.43□□□□□ -1.22
HDAC1-204ENST00000471488 AP5Z1O43299 807 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 TOM1L1O75674 476 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 NFATC1O95644 943 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 CLTAP09496 248 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 OR52Z1P0C646 297 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 USP17L7P0C7H9 530 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 DDX6P26196 483 aaKnown RBP eCLIP7.43□□□□□ -1.22
HDAC1-204ENST00000471488 RPA1P27694 616 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 P2RY2P41231 377 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 WASP42768 502 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 BYSLQ13895 437 aaKnown RBP7.43□□□□□ -1.22
HDAC1-204ENST00000471488 CRY1Q16526 586 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 DDR2Q16832 855 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 PLEKHG6Q3KR16 790 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 ZC2HC1CQ53FD0 456 aaPredicted RBP7.43□□□□□ -1.22
HDAC1-204ENST00000471488 EMC10Q5UCC4 262 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 SLC23A3Q6PIS1 610 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 TMEM92Q6UXU6 159 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 TAS1R3Q7RTX0 852 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 RAB44Q7Z6P3 723 aaPredicted RBP7.43□□□□□ -1.22
HDAC1-204ENST00000471488 PIP4P1Q86T03 277 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 NAXDQ8IW45 347 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 SFTPA1Q8IWL2 248 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 SCN4BQ8IWT1 228 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 FBXL16Q8N461 479 aa7.43□□□□□ -1.22
HDAC1-204ENST00000471488 ARL14EPQ8N8R7 260 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms