RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 DNAJC24Q6P3W2 148 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 GLB1LQ6UWU2 654 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 ACOT1Q86TX2 421 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 RTN4RL1Q86UN2 441 aaPredicted RBP9.94□□□□□ -0.82
VPS52-216ENST00000471309 TMEM86AQ8N2M4 240 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 PDCL2Q8N4E4 241 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 C3orf20Q8ND61 904 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 CD101Q93033 1021 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 TNIP3Q96KP6 325 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 PSMB7Q99436 277 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 CARD9Q9H257 536 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 WDR35Q9P2L0 1181 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 CHORDC1Q9UHD1 332 aaPredicted RBP9.94□□□□□ -0.82
VPS52-216ENST00000471309 CYTH4Q9UIA0 394 aa9.94□□□□□ -0.82
VPS52-216ENST00000471309 CCDC66A2RUB6 948 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 CASTOR2A6NHX0 329 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 TMEM110-MUSTN1A8MSY1 372 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 PDE2AO00408 941 aaPredicted RBP9.93□□□□□ -0.82
VPS52-216ENST00000471309 GABRDO14764 452 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 SPOPO43791 374 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 PROSCO94903 275 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 POMCP01189 267 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 CXCL10P02778 98 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 COMTP21964 271 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 CTNNA2P26232 953 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 GNL1P36915 607 aaPredicted RBP9.93□□□□□ -0.82
VPS52-216ENST00000471309 SLC1A1P43005 524 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 GABRB2P47870 512 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 GJA8P48165 433 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 DSC1Q08554 894 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 FAAP100Q0VG06 881 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 ELF2Q15723 593 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 ERCC6LQ2NKX8 1250 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 TRIM60Q495X7 471 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 C2CD6Q53TS8 623 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 CLLU1OSQ5K130 101 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 TEX35Q5T0J7 233 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 LLGL2Q6P1M3 1020 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 OSTM1Q86WC4 334 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 UBL4BQ8N7F7 174 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 C12orf29Q8N999 325 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 C3orf58Q8NDZ4 430 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 FEZF2Q8TBJ5 459 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 URGCPQ8TCY9 931 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 ACTRT1Q8TDG2 376 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 IPO4Q8TEX9 1081 aaKnown RBP9.93□□□□□ -0.82
VPS52-216ENST00000471309 STK32AQ8WU08 396 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 RSPH1Q8WYR4 309 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 RABGGTAQ92696 567 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 SENP8Q96LD8 212 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 CPXM1Q96SM3 734 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 MIS12Q9H081 205 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 WNT8AQ9H1J5 351 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 HIPK3Q9H422 1215 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 DPEP3Q9H4B8 488 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 KANSL3Q9P2N6 904 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 HESX1Q9UBX0 185 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.93□□□□□ -0.82
VPS52-216ENST00000471309 INPP5FQ9Y2H2 1132 aa9.93□□□□□ -0.82
VPS52-216ENST00000471309 V9GYY5 206 aaPredicted RBP9.93□□□□□ -0.82
VPS52-216ENST00000471309 HTTP42858 3142 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 LTBP2Q14767 1821 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 ARHGEF37A1IGU5 675 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 TMEM191CA6NGB0 347 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 TMEM189-UBE2V1I3L0A0 370 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 MYO1FO00160 1098 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 PGRMC1O00264 195 aaKnown RBP9.92□□□□□ -0.82
VPS52-216ENST00000471309 HCRTO43612 131 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 ERBB2P04626 1255 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 PFKMP08237 780 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 ODC1P11926 461 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 CAPN2P17655 700 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 LMO2P25791 158 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 LHX1P48742 406 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 DNA2P51530 1060 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 ATN1P54259 1190 aaPredicted RBP9.92□□□□□ -0.82
VPS52-216ENST00000471309 BCAT1P54687 386 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 PSMC1P62191 440 aaKnown RBP9.92□□□□□ -0.82
VPS52-216ENST00000471309 TLE2Q04725 743 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 NAA30Q147X3 362 aaPredicted RBP9.92□□□□□ -0.82
VPS52-216ENST00000471309 CLUL1Q15846 466 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 PTPROQ16827 1216 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 NOMO2Q5JPE7 1267 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 PPP1R26Q5T8A7 1209 aaPredicted RBP9.92□□□□□ -0.82
VPS52-216ENST00000471309 WSCD1Q658N2 575 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 DSTYKQ6XUX3 929 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 TTC30AQ86WT1 665 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 RASGEF1CQ8N431 466 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 B3GALNT2Q8NCR0 500 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 SPATA4Q8NEY3 305 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 DBF4BQ8NFT6 615 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.92□□□□□ -0.82
VPS52-216ENST00000471309 ANKRD7Q92527 254 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 TSC1Q92574 1164 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 ALG3Q92685 438 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 C18orf8Q96DM3 657 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 BTBD6Q96KE9 485 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 PAAF1Q9BRP4 392 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 SELENOOQ9BVL4 669 aa9.92□□□□□ -0.82
VPS52-216ENST00000471309 SLC4A5Q9BY07 1137 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms