RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 TMEM174Q8WUU8 243 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 NKD2Q969F2 451 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-211ENST00000471260 CLDN23Q96B33 292 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 MSANTD3Q96H12 275 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 FNBP1Q96RU3 617 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 BLZF1Q9H2G9 400 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 TASP1Q9H6P5 420 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 RRAGDQ9NQL2 400 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-211ENST00000471260 DDX43Q9NXZ2 648 aaKnown RBP14.49□□□□□ -0.09
HMGN1-211ENST00000471260 ABI2Q9NYB9 513 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-211ENST00000471260 MYO15AQ9UKN7 3530 aa14.49□□□□□ -0.09
HMGN1-211ENST00000471260 DPYSL4O14531 572 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 CHADO15335 359 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 SOAT2O75908 522 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 FAM163BP0C2L3 166 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 CSH1P0DML2 217 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 CSH2P0DML3 217 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 DDX6P26196 483 aaKnown RBP eCLIP14.48□□□□□ -0.09
HMGN1-211ENST00000471260 GDI1P31150 447 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 VIPR2P41587 438 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 AFMP43652 599 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 CUL4BQ13620 913 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 PSMD6Q15008 389 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 KNOP1Q1ED39 458 aaKnown RBP14.48□□□□□ -0.09
HMGN1-211ENST00000471260 CFAP221Q4G0U5 840 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 INTS6LQ5JSJ4 861 aaKnown RBP14.48□□□□□ -0.09
HMGN1-211ENST00000471260 CAVIN1Q6NZI2 390 aaKnown RBP14.48□□□□□ -0.09
HMGN1-211ENST00000471260 ZC3H14Q6PJT7 736 aaKnown RBP14.48□□□□□ -0.09
HMGN1-211ENST00000471260 LRSAM1Q6UWE0 723 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 LIMS2Q7Z4I7 341 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 ARID3BQ8IVW6 561 aaPredicted RBP14.48□□□□□ -0.09
HMGN1-211ENST00000471260 YAF2Q8IY57 180 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 ADGRF2Q8IZF7 708 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 OR5B17Q8NGF7 314 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 FUBP3Q96I24 572 aaKnown RBP eCLIP14.48□□□□□ -0.09
HMGN1-211ENST00000471260 HPDLQ96IR7 371 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 LPIN3Q9BQK8 851 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 IER2Q9BTL4 223 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 MKNK1Q9BUB5 465 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 FBXO4Q9UKT5 387 aa14.48□□□□□ -0.09
HMGN1-211ENST00000471260 DMDP11532 3685 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 MIA3Q5JRA6 1907 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 USP34Q70CQ2 3546 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 PRR23AA6NEV1 266 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 ACTN4O43707 911 aaKnown RBP14.47□□□□□ -0.09
HMGN1-211ENST00000471260 TNNI1P19237 187 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 RPL10AP62906 217 aaKnown RBP14.47□□□□□ -0.09
HMGN1-211ENST00000471260 CYP24A1Q07973 514 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 MAPRE1Q15691 268 aaKnown RBP14.47□□□□□ -0.09
HMGN1-211ENST00000471260 SOWAHAQ2M3V2 549 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 ZNF528Q3MIS6 628 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 ARHGAP29Q52LW3 1261 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 GPR158Q5T848 1215 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 TRAPPC11Q7Z392 1133 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 FRMD5Q7Z6J6 570 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 NELFCDQ8IXH7 590 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 RDH13Q8NBN7 331 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 SPATA32Q96LK8 384 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 CEP295NLQ96MC4 621 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 PKMYT1Q99640 499 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 CGRRF1Q99675 332 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 IL21Q9HBE4 155 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 SLC39A2Q9NP94 309 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 UXTQ9UBK9 157 aaPredicted RBP14.47□□□□□ -0.09
HMGN1-211ENST00000471260 SERTAD1Q9UHV2 236 aa14.47□□□□□ -0.09
HMGN1-211ENST00000471260 MTF2Q9Y483 593 aaPredicted RBP14.47□□□□□ -0.09
HMGN1-211ENST00000471260 F5P12259 2224 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 PTPRJQ12913 1337 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 ARNTLO00327 626 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 CLIC2O15247 247 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 LAMTOR5O43504 91 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 SP9P0CG40 484 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 DLATP10515 647 aaKnown RBP14.46□□□□□ -0.09
HMGN1-211ENST00000471260 HMGA1P17096 107 aaKnown RBP14.46□□□□□ -0.09
HMGN1-211ENST00000471260 CD72P21854 359 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 TARSP26639 723 aaKnown RBP14.46□□□□□ -0.09
HMGN1-211ENST00000471260 CASP1P29466 404 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 PLCB2Q00722 1185 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 LMBRD2Q68DH5 695 aaPredicted RBP14.46□□□□□ -0.09
HMGN1-211ENST00000471260 FAM171BQ6P995 826 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 MAMSTRQ6ZN01 415 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 C4orf50Q6ZRC1 276 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 ASCL5Q7RTU5 278 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 GPT2Q8TD30 523 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 CSGALNACT1Q8TDX6 532 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 GIPC2Q8TF65 315 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 TRMT2BQ96GJ1 504 aaKnown RBP14.46□□□□□ -0.09
HMGN1-211ENST00000471260 PAGE5Q96GU1 130 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 PDLIM2Q96JY6 352 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 PI4K2AQ9BTU6 479 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 SCAND2PQ9GZW5 306 aaPredicted RBP14.46□□□□□ -0.09
HMGN1-211ENST00000471260 C8orf33Q9H7E9 229 aaPredicted RBP14.46□□□□□ -0.09
HMGN1-211ENST00000471260 EXOC1Q9NV70 894 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 TMLHEQ9NVH6 421 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 GTF3C4Q9UKN8 822 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 CDH9Q9ULB4 789 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 HPSEQ9Y251 543 aa14.46□□□□□ -0.09
HMGN1-211ENST00000471260 CACNA1IQ9P0X4 2223 aa14.45□□□□□ -0.1
HMGN1-211ENST00000471260 FAM237AA0A1B0GTK4 181 aa14.45□□□□□ -0.1
HMGN1-211ENST00000471260 SHISA7A6NL88 538 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms