RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 IRX2Q9BZI1 471 aaPredicted RBP16.05■□□□□ 0.16
COL4A5-203ENST00000470339 THAP2Q9H0W7 228 aa16.05■□□□□ 0.16
COL4A5-203ENST00000470339 DDX43Q9NXZ2 648 aaKnown RBP16.05■□□□□ 0.16
COL4A5-203ENST00000470339 UVRAGQ9P2Y5 699 aa16.05■□□□□ 0.16
COL4A5-203ENST00000470339 ADAM28Q9UKQ2 775 aa16.05■□□□□ 0.16
COL4A5-203ENST00000470339 COL4A6Q14031 1691 aa16.05■□□□□ 0.16
COL4A5-203ENST00000470339 MACROD2A1Z1Q3 448 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 UPP2O95045 317 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 ITGB1P05556 798 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 CALB1P05937 261 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 GALTP07902 379 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 ACRP10323 421 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 PTPN1P18031 435 aaKnown RBP16.04■□□□□ 0.16
COL4A5-203ENST00000470339 ABCB4P21439 1286 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 GPD2P43304 727 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 BRCC3P46736 316 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 ORC1Q13415 861 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 PKDCCQ504Y2 493 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 PPP1R26Q5T8A7 1209 aaPredicted RBP16.04■□□□□ 0.16
COL4A5-203ENST00000470339 LIN9Q5TKA1 542 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 PSRC1Q6PGN9 363 aaPredicted RBP16.04■□□□□ 0.16
COL4A5-203ENST00000470339 SYT10Q6XYQ8 523 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 C16orf59Q7L2K0 433 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 PASD1Q8IV76 773 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 CMTR2Q8IYT2 770 aaKnown RBP16.04■□□□□ 0.16
COL4A5-203ENST00000470339 C12orf29Q8N999 325 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 ANKRD52Q8NB46 1076 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 SLC35G2Q8TBE7 412 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 STK32AQ8WU08 396 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 BADQ92934 168 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 ALS2CR12Q96Q35 445 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 HNRNPABQ99729 332 aaKnown RBP16.04■□□□□ 0.16
COL4A5-203ENST00000470339 MIS12Q9H081 205 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 RC3H2Q9HBD1 1191 aaKnown RBP16.04■□□□□ 0.16
COL4A5-203ENST00000470339 ADAM22Q9P0K1 906 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 HESX1Q9UBX0 185 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 SALL4Q9UJQ4 1053 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 TSPAN16Q9UKR8 245 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 PAXBP1Q9Y5B6 917 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 PCDHGC5Q9Y5F6 944 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 VWA8A3KMH1 1905 aa16.04■□□□□ 0.16
COL4A5-203ENST00000470339 OAZ2O95190 189 aa16.03■□□□□ 0.16
COL4A5-203ENST00000470339 CASQ1P31415 396 aa16.03■□□□□ 0.16
COL4A5-203ENST00000470339 SLC11A1P49279 550 aa16.03■□□□□ 0.16
COL4A5-203ENST00000470339 ALDH7A1P49419 539 aaKnown RBP16.03■□□□□ 0.16
COL4A5-203ENST00000470339 BCAR1P56945 870 aa16.03■□□□□ 0.16
COL4A5-203ENST00000470339 SNX16P57768 344 aa16.03■□□□□ 0.16
COL4A5-203ENST00000470339 PTP4A2Q12974 167 aa16.03■□□□□ 0.16
COL4A5-203ENST00000470339 PAN2Q504Q3 1202 aaKnown RBP16.03■□□□□ 0.16
COL4A5-203ENST00000470339 OVOS1Q6IE37 1185 aa16.03■□□□□ 0.16
COL4A5-203ENST00000470339 ERICH1Q86X53 443 aa16.03■□□□□ 0.16
COL4A5-203ENST00000470339 DNAAF5Q86Y56 855 aa16.03■□□□□ 0.16
COL4A5-203ENST00000470339 C7orf61Q8IZ16 206 aa16.03■□□□□ 0.16
COL4A5-203ENST00000470339 WDR24Q96S15 920 aa16.03■□□□□ 0.16
COL4A5-203ENST00000470339 DPEP3Q9H4B8 488 aa16.03■□□□□ 0.16
COL4A5-203ENST00000470339 CWH43Q9H720 699 aa16.03■□□□□ 0.16
COL4A5-203ENST00000470339 CYLDQ9NQC7 956 aa16.03■□□□□ 0.16
COL4A5-203ENST00000470339 DNAI1Q9UI46 699 aa16.03■□□□□ 0.16
COL4A5-203ENST00000470339 STRIP2Q9ULQ0 834 aa16.03■□□□□ 0.16
COL4A5-203ENST00000470339 SF3B1O75533 1304 aaKnown RBP eCLIP16.02■□□□□ 0.169e-6■■■■■ 68.9
COL4A5-203ENST00000470339 CCDC85CA6NKD9 419 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 I3L4J1 428 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 M0QYV0 167 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 MOCS3O95396 460 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 NOP2P46087 812 aaKnown RBP16.02■□□□□ 0.16
COL4A5-203ENST00000470339 GABRB2P47870 512 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 NAP1L1P55209 391 aaKnown RBP16.02■□□□□ 0.16
COL4A5-203ENST00000470339 GSCP56915 257 aaPredicted RBP16.02■□□□□ 0.16
COL4A5-203ENST00000470339 DEFB103AP81534 67 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 PLCB3Q01970 1234 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 YWHAHQ04917 246 aaPredicted RBP16.02■□□□□ 0.16
COL4A5-203ENST00000470339 MAPRE1Q15691 268 aaKnown RBP16.02■□□□□ 0.16
COL4A5-203ENST00000470339 GOLGA7BQ2TAP0 167 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 TMEM240Q5SV17 173 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 FAM171BQ6P995 826 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 ZNF365Q70YC5 407 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 OTOP2Q7RTS6 562 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 SLC35F6Q8N357 371 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 C1orf131Q8NDD1 294 aaKnown RBP16.02■□□□□ 0.16
COL4A5-203ENST00000470339 TPCN2Q8NHX9 752 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 MYCBPAPQ8TBZ2 947 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 HASPINQ8TF76 798 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 ZNF653Q96CK0 615 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 ARHGEF26Q96DR7 871 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 RTP3Q9BQQ7 232 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 SYT15Q9BQS2 421 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 OXCT2Q9BYC2 517 aaPredicted RBP16.02■□□□□ 0.16
COL4A5-203ENST00000470339 MRPL47Q9HD33 250 aaKnown RBP16.02■□□□□ 0.16
COL4A5-203ENST00000470339 MARCH5Q9NX47 278 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 WDR35Q9P2L0 1181 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 CNOT8Q9UFF9 292 aaKnown RBP16.02■□□□□ 0.16
COL4A5-203ENST00000470339 PRG3Q9Y2Y8 225 aaPredicted RBP16.02■□□□□ 0.16
COL4A5-203ENST00000470339 JRKLQ9Y4A0 524 aa16.02■□□□□ 0.16
COL4A5-203ENST00000470339 TIMM13Q9Y5L4 95 aaPredicted RBP16.02■□□□□ 0.16
COL4A5-203ENST00000470339 PTPRDP23468 1912 aa16.02■□□□□ 0.15
COL4A5-203ENST00000470339 CTAGE9A4FU28 777 aa16.01■□□□□ 0.15
COL4A5-203ENST00000470339 FGFR3P22607 806 aa16.01■□□□□ 0.15
COL4A5-203ENST00000470339 SSTR3P32745 418 aaPredicted RBP16.01■□□□□ 0.15
COL4A5-203ENST00000470339 BCAT1P54687 386 aa16.01■□□□□ 0.15
COL4A5-203ENST00000470339 TAP1Q03518 808 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms