RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 CTNND1O60716 968 aaKnown RBP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 DKC1O60832 514 aaKnown RBP eCLIP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 ATP9AO75110 1047 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 GOSR1O95249 250 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 ZBED1O96006 694 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 CYP1A1P04798 512 aaPredicted RBP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 ITGA2BP08514 1039 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 WEE2P0C1S8 567 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 PDHBP11177 359 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 BMP4P12644 408 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 ACTN1P12814 892 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 HDCP19113 662 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 EIF2AK2P19525 551 aaKnown RBP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 IFNA8P32881 189 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 ACSL1P33121 698 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 CRKP46108 304 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 KCNJ6P48051 423 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 POU3F4P49335 361 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 CCR3P51677 355 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 TKTL1P51854 596 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 PCBP4P57723 403 aaKnown RBP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 SLC26A5P58743 744 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 GPR85P60893 370 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 HAND2P61296 217 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 COTL1Q14019 142 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 MLC1Q15049 377 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 ASIC2Q16515 512 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 AANATQ16613 207 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 SPRED3Q2MJR0 410 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 LRIT3Q3SXY7 679 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 XKR9Q5GH70 373 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 AARS2Q5JTZ9 985 aaKnown RBP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 RTP2Q5QGT7 225 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 FAM102BQ5T8I3 360 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 ZNF468Q5VIY5 522 aaPredicted RBP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 PGM2L1Q6PCE3 622 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 C15orf52Q6ZUT6 534 aaKnown RBP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 ERMP1Q7Z2K6 904 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 ITIH5Q86UX2 942 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 PLA2G4DQ86XP0 818 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 SLC22A9Q8IVM8 553 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 ARL14Q8N4G2 192 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 EXD1Q8NHP7 514 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 RFWD2Q8NHY2 731 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 TEX47Q8TBZ9 253 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 AGR3Q8TD06 166 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 TRPM4Q8TD43 1214 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 SLC26A7Q8TE54 656 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 GRK7Q8WTQ7 553 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 RUFY2Q8WXA3 655 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 SLC7A3Q8WY07 619 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 PTPRN2Q92932 1015 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 CIDECQ96AQ7 238 aaPredicted RBP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 LENG1Q96BZ8 264 aaPredicted RBP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 WDR24Q96S15 920 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 PIP5K1AQ99755 562 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 BRIP1Q9BX63 1249 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 CALN1Q9BXU9 219 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 CRNKL1Q9BZJ0 848 aaKnown RBP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 UNKQ9C0B0 810 aaKnown RBP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 TTYH3Q9C0H2 523 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 XKR8Q9H6D3 395 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 AZI2Q9H6S1 392 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 ATP13A3Q9H7F0 1226 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 MVB12BQ9H7P6 319 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 PIDD1Q9HB75 910 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 SRA1Q9HD15 236 aaKnown RBP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 DDX4Q9NQI0 724 aaKnown RBP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 ARHGEF38Q9NXL2 777 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 MRPL39Q9NYK5 338 aaKnown RBP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 HACD3Q9P035 362 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 HSFX1Q9UBD0 423 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 UBA2Q9UBT2 640 aaPredicted RBP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 EIF2B4Q9UI10 523 aaKnown RBP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 PCOLCE2Q9UKZ9 415 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 SLC8A2Q9UPR5 921 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 RWDD3Q9Y3V2 267 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 TRPV2Q9Y5S1 764 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 SESN1Q9Y6P5 492 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 WDR19Q8NEZ3 1342 aa5.4□□□□□ -1.55
COL3A1-205ENST00000470167 ANKRD30AQ9BXX3 1397 aa5.4□□□□□ -1.55
COL3A1-205ENST00000470167 KIF27Q86VH2 1401 aa5.4□□□□□ -1.55
COL3A1-205ENST00000470167 C15orf38-AP3S2A0A0A6YYH1 394 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 A0A0A6YYJ9 748 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 LOC102724428A0A0B4J2F2 783 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 ZSCAN5CA6NGD5 496 aaPredicted RBP5.39□□□□□ -1.55
COL3A1-205ENST00000470167 LRRIQ4A6NIV6 560 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 VSTM5A8MXK1 200 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 SLCO1B7G3V0H7 640 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 NDUFS8O00217 210 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 NFKBIEO00221 500 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 PDPK1O15530 556 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 GATCO43716 136 aaKnown RBP5.39□□□□□ -1.55
COL3A1-205ENST00000470167 GPC4O75487 556 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 SNAPINO95295 136 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 F13A1P00488 732 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 GHRHP01286 108 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 LMNAP02545 664 aaKnown RBP5.39□□□□□ -1.55
COL3A1-205ENST00000470167 DNTTP04053 509 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms