RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 PREPLQ4J6C6 727 aaPredicted RBP12.29□□□□□ -0.44
COMMD2-202ENST00000469896 NAIF1Q69YI7 327 aaPredicted RBP12.29□□□□□ -0.44
COMMD2-202ENST00000469896 MARCH9Q86YJ5 346 aa12.29□□□□□ -0.44
COMMD2-202ENST00000469896 CCDC33Q8N5R6 958 aa12.29□□□□□ -0.44
COMMD2-202ENST00000469896 FRMD1Q8N878 549 aa12.29□□□□□ -0.44
COMMD2-202ENST00000469896 CCDC148Q8NFR7 591 aa12.29□□□□□ -0.44
COMMD2-202ENST00000469896 HMGB4Q8WW32 186 aa12.29□□□□□ -0.44
COMMD2-202ENST00000469896 ZSWIM4Q9H7M6 989 aa12.29□□□□□ -0.44
COMMD2-202ENST00000469896 TOPORSQ9NS56 1045 aaPredicted RBP12.29□□□□□ -0.44
COMMD2-202ENST00000469896 DNMT3LQ9UJW3 386 aa12.29□□□□□ -0.44
COMMD2-202ENST00000469896 NUP210Q8TEM1 1887 aaPredicted RBP12.29□□□□□ -0.44
COMMD2-202ENST00000469896 KIF26AQ9ULI4 1882 aaPredicted RBP12.28□□□□□ -0.44
COMMD2-202ENST00000469896 EML1O00423 815 aa12.28□□□□□ -0.44
COMMD2-202ENST00000469896 ADAMTS3O15072 1205 aa12.28□□□□□ -0.44
COMMD2-202ENST00000469896 DKK1O94907 266 aa12.28□□□□□ -0.44
COMMD2-202ENST00000469896 DDX6P26196 483 aaKnown RBP eCLIP12.28□□□□□ -0.44
COMMD2-202ENST00000469896 RPL9P32969 192 aaKnown RBP12.28□□□□□ -0.44
COMMD2-202ENST00000469896 MCM4P33991 863 aa12.28□□□□□ -0.44
COMMD2-202ENST00000469896 ARL2P36404 184 aa12.28□□□□□ -0.44
COMMD2-202ENST00000469896 YARSP54577 528 aaKnown RBP12.28□□□□□ -0.44
COMMD2-202ENST00000469896 CXADRP78310 365 aa12.28□□□□□ -0.44
COMMD2-202ENST00000469896 MRPS21P82921 87 aaKnown RBP12.28□□□□□ -0.44
COMMD2-202ENST00000469896 FAM187BQ17R55 369 aa12.28□□□□□ -0.44
COMMD2-202ENST00000469896 HSF5Q4G112 596 aaPredicted RBP12.28□□□□□ -0.44
COMMD2-202ENST00000469896 C6orf118Q5T5N4 469 aa12.28□□□□□ -0.44
COMMD2-202ENST00000469896 PCSK4Q6UW60 755 aa12.28□□□□□ -0.44
COMMD2-202ENST00000469896 ETNPPLQ8TBG4 499 aa12.28□□□□□ -0.44
COMMD2-202ENST00000469896 SUSD3Q96L08 255 aa12.28□□□□□ -0.44
COMMD2-202ENST00000469896 SLC46A2Q9BY10 475 aa12.28□□□□□ -0.44
COMMD2-202ENST00000469896 LRRC2Q9BYS8 371 aa12.28□□□□□ -0.44
COMMD2-202ENST00000469896 PRDM16Q9HAZ2 1276 aa12.28□□□□□ -0.44
COMMD2-202ENST00000469896 TDP1Q9NUW8 608 aa12.28□□□□□ -0.44
COMMD2-202ENST00000469896 WRAP73Q9P2S5 460 aaPredicted RBP12.28□□□□□ -0.44
COMMD2-202ENST00000469896 NXF1Q9UBU9 619 aaKnown RBP12.28□□□□□ -0.44
COMMD2-202ENST00000469896 PCDH15Q96QU1 1955 aa12.27□□□□□ -0.44
COMMD2-202ENST00000469896 CYP3A7-CYP3A51PA0A087WV96 503 aa12.27□□□□□ -0.45
COMMD2-202ENST00000469896 SMIM28A0A1B0GU29 152 aa12.27□□□□□ -0.45
COMMD2-202ENST00000469896 GOLGA8AA7E2F4 631 aa12.27□□□□□ -0.45
COMMD2-202ENST00000469896 GOLGA8BA8MQT2 603 aa12.27□□□□□ -0.45
COMMD2-202ENST00000469896 ATXN1LP0C7T5 689 aaKnown RBP12.27□□□□□ -0.45
COMMD2-202ENST00000469896 CYP3A7P24462 503 aa12.27□□□□□ -0.45
COMMD2-202ENST00000469896 IFNAR2P48551 515 aa12.27□□□□□ -0.45
COMMD2-202ENST00000469896 SEMG2Q02383 582 aa12.27□□□□□ -0.45
COMMD2-202ENST00000469896 YWHAHQ04917 246 aaPredicted RBP12.27□□□□□ -0.45
COMMD2-202ENST00000469896 GPR17Q13304 367 aa12.27□□□□□ -0.45
COMMD2-202ENST00000469896 SMAD1Q15797 465 aaKnown RBP12.27□□□□□ -0.45
COMMD2-202ENST00000469896 EOGTQ5NDL2 527 aa12.27□□□□□ -0.45
COMMD2-202ENST00000469896 SYCP2LQ5T4T6 812 aa12.27□□□□□ -0.45
COMMD2-202ENST00000469896 RGL4Q8IZJ4 473 aa12.27□□□□□ -0.45
COMMD2-202ENST00000469896 DEFB119Q8N690 84 aa12.27□□□□□ -0.45
COMMD2-202ENST00000469896 ENGASEQ8NFI3 743 aa12.27□□□□□ -0.45
COMMD2-202ENST00000469896 TBCKQ8TEA7 893 aa12.27□□□□□ -0.45
COMMD2-202ENST00000469896 USP13Q92995 863 aaPredicted RBP12.27□□□□□ -0.45
COMMD2-202ENST00000469896 POLR3FQ9H1D9 316 aaPredicted RBP12.27□□□□□ -0.45
COMMD2-202ENST00000469896 C2orf40Q9H1Z8 148 aa12.27□□□□□ -0.45
COMMD2-202ENST00000469896 FZD8Q9H461 694 aa12.27□□□□□ -0.45
COMMD2-202ENST00000469896 DUS2Q9NX74 493 aaKnown RBP12.27□□□□□ -0.45
COMMD2-202ENST00000469896 TOR4AQ9NXH8 423 aa12.27□□□□□ -0.45
COMMD2-202ENST00000469896 CCL26Q9Y258 94 aa12.27□□□□□ -0.45
COMMD2-202ENST00000469896 PTPRBP23467 1997 aa12.27□□□□□ -0.45
COMMD2-202ENST00000469896 UBR5O95071 2799 aaPredicted RBP12.26□□□□□ -0.45
COMMD2-202ENST00000469896 CCDC196A0A1B0GTZ2 297 aa12.26□□□□□ -0.45
COMMD2-202ENST00000469896 OR6C75A6NL08 312 aa12.26□□□□□ -0.45
COMMD2-202ENST00000469896 PLK4O00444 970 aa12.26□□□□□ -0.45
COMMD2-202ENST00000469896 FLRT2O43155 660 aa12.26□□□□□ -0.45
COMMD2-202ENST00000469896 TDP2O95551 362 aa12.26□□□□□ -0.45
COMMD2-202ENST00000469896 ZNF883P0CG24 379 aa12.26□□□□□ -0.45
COMMD2-202ENST00000469896 GRIK2Q13002 908 aa12.26□□□□□ -0.45
COMMD2-202ENST00000469896 HDAC1Q13547 482 aaPredicted RBP12.26□□□□□ -0.45
COMMD2-202ENST00000469896 COLEC12Q5KU26 742 aa12.26□□□□□ -0.45
COMMD2-202ENST00000469896 CENPPQ6IPU0 288 aa12.26□□□□□ -0.45
COMMD2-202ENST00000469896 USP37Q86T82 979 aa12.26□□□□□ -0.45
COMMD2-202ENST00000469896 MAB21L3Q8N8X9 362 aa12.26□□□□□ -0.45
COMMD2-202ENST00000469896 TXNDC5Q8NBS9 432 aaKnown RBP12.26□□□□□ -0.45
COMMD2-202ENST00000469896 RHBDD1Q8TEB9 315 aa12.26□□□□□ -0.45
COMMD2-202ENST00000469896 OSCP1Q8WVF1 389 aa12.26□□□□□ -0.45
COMMD2-202ENST00000469896 HSPA12BQ96MM6 686 aa12.26□□□□□ -0.45
COMMD2-202ENST00000469896 TMEM134Q9H6X4 195 aa12.26□□□□□ -0.45
COMMD2-202ENST00000469896 HSFX1Q9UBD0 423 aa12.26□□□□□ -0.45
COMMD2-202ENST00000469896 DDX25Q9UHL0 483 aaKnown RBP12.26□□□□□ -0.45
COMMD2-202ENST00000469896 SLC27A5Q9Y2P5 690 aa12.26□□□□□ -0.45
COMMD2-202ENST00000469896 RBM8AQ9Y5S9 174 aaKnown RBP12.26□□□□□ -0.45
COMMD2-202ENST00000469896 AK5Q9Y6K8 562 aa12.26□□□□□ -0.45
COMMD2-202ENST00000469896 TNRC6BQ9UPQ9 1833 aaKnown RBP12.25□□□□□ -0.45
COMMD2-202ENST00000469896 TCRBV21S2A2A0A5A6 115 aa12.25□□□□□ -0.45
COMMD2-202ENST00000469896 K7EQS6 105 aa12.25□□□□□ -0.45
COMMD2-202ENST00000469896 ZBTB24O43167 697 aaPredicted RBP12.25□□□□□ -0.45
COMMD2-202ENST00000469896 EDIL3O43854 480 aa12.25□□□□□ -0.45
COMMD2-202ENST00000469896 OAZ2O95190 189 aa12.25□□□□□ -0.45
COMMD2-202ENST00000469896 CER1O95813 267 aa12.25□□□□□ -0.45
COMMD2-202ENST00000469896 HNF1BP35680 557 aa12.25□□□□□ -0.45
COMMD2-202ENST00000469896 AKAP17AQ02040 695 aaKnown RBP12.25□□□□□ -0.45
COMMD2-202ENST00000469896 SOX4Q06945 474 aaPredicted RBP12.25□□□□□ -0.45
COMMD2-202ENST00000469896 ZNF268Q14587 947 aaPredicted RBP12.25□□□□□ -0.45
COMMD2-202ENST00000469896 MTF1Q14872 753 aa12.25□□□□□ -0.45
COMMD2-202ENST00000469896 EPHA7Q15375 998 aa12.25□□□□□ -0.45
COMMD2-202ENST00000469896 DIEXFQ68CQ4 756 aaKnown RBP12.25□□□□□ -0.45
COMMD2-202ENST00000469896 CDCA2Q69YH5 1023 aaPredicted RBP12.25□□□□□ -0.45
COMMD2-202ENST00000469896 MOXD1Q6UVY6 613 aa12.25□□□□□ -0.45
COMMD2-202ENST00000469896 PRICKLE2Q7Z3G6 844 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms