RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 RIPK2O43353 540 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 SKAP2O75563 359 aaPredicted RBP9.95□□□□□ -0.82
TOP3A-203ENST00000469739 VIMP08670 466 aaKnown RBP9.95□□□□□ -0.82
TOP3A-203ENST00000469739 PSMA2P25787 234 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 HADHBP55084 474 aaKnown RBP9.95□□□□□ -0.82
TOP3A-203ENST00000469739 PSMC1P62191 440 aaKnown RBP9.95□□□□□ -0.82
TOP3A-203ENST00000469739 ATP11AP98196 1134 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 TTLL4Q14679 1199 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 FASTKD3Q14CZ7 662 aaKnown RBP9.95□□□□□ -0.82
TOP3A-203ENST00000469739 SMAD1Q15797 465 aaKnown RBP9.95□□□□□ -0.82
TOP3A-203ENST00000469739 PTPN20Q4JDL3 420 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 DPY19L2Q6NUT2 758 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 SCYL2Q6P3W7 929 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 MPZL3Q6UWV2 235 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 PARP9Q8IXQ6 854 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 C1orf127Q8N9H9 656 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 DYDC1Q8WWB3 177 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 ANKRD36BP1Q96IX9 119 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 PIWIL1Q96J94 861 aaKnown RBP9.95□□□□□ -0.82
TOP3A-203ENST00000469739 CALN1Q9BXU9 219 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 SPON1Q9HCB6 807 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 SETD4Q9NVD3 440 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 PARVAQ9NVD7 372 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 CPSF3Q9UKF6 684 aaKnown RBP9.95□□□□□ -0.82
TOP3A-203ENST00000469739 ANKRD33BA6NCL7 494 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 SPDYE5A6NIY4 337 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 POC1B-GALNT4F8VUJ3 575 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 SGK1O00141 431 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 FSCN2O14926 492 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 PMM2O15305 246 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 FAM189A1O60320 539 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 GBP2P32456 591 aaPredicted RBP9.94□□□□□ -0.82
TOP3A-203ENST00000469739 NFX1Q12986 1120 aaKnown RBP9.94□□□□□ -0.82
TOP3A-203ENST00000469739 ZNF667Q5HYK9 610 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 IZUMO3Q5VZ72 239 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 ARMCX6Q7L4S7 300 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 ANKMY2Q8IV38 441 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 C7orf31Q8N865 590 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 CPXM1Q96SM3 734 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 PRMT1Q99873 361 aaKnown RBP9.94□□□□□ -0.82
TOP3A-203ENST00000469739 SH3GL3Q99963 347 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 EPN3Q9H201 632 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 MRPL47Q9HD33 250 aaKnown RBP9.94□□□□□ -0.82
TOP3A-203ENST00000469739 AAASQ9NRG9 546 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 METTL5Q9NRN9 209 aaKnown RBP9.94□□□□□ -0.82
TOP3A-203ENST00000469739 KLK14Q9P0G3 267 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 M0QYV0 167 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 PDHXO00330 501 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 ZC3H11AO75152 810 aaKnown RBP eCLIP9.94□□□□□ -0.82
TOP3A-203ENST00000469739 MTA2O94776 668 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 GAS8O95995 478 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 LGALS2P05162 132 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 OSBPP22059 807 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 MMP8P22894 467 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 TBXAS1P24557 533 aaPredicted RBP9.94□□□□□ -0.82
TOP3A-203ENST00000469739 SCNN1AP37088 669 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 EFNA5P52803 228 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 GPS1Q13098 491 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 MXD4Q14582 209 aaPredicted RBP9.94□□□□□ -0.82
TOP3A-203ENST00000469739 E2F5Q15329 346 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 SGSM1Q2NKQ1 1148 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 WDR49Q8IV35 697 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 CD302Q8IX05 232 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 TMEM35BQ8NCS4 154 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 SEC14L1Q92503 715 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 SMARCAD1Q9H4L7 1026 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 GPATCH2LQ9NWQ4 482 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 CACNG4Q9UBN1 327 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 SIX4Q9UIU6 781 aa9.94□□□□□ -0.82
TOP3A-203ENST00000469739 ACKR2O00590 384 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 PPEF2O14830 753 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 TP73O15350 636 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 RPSAP08865 295 aaKnown RBP9.93□□□□□ -0.82
TOP3A-203ENST00000469739 TGFB3P10600 412 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 ARF4P18085 180 aaPredicted RBP9.93□□□□□ -0.82
TOP3A-203ENST00000469739 ASPAP45381 313 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 ARSEP51690 589 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 CLDN10P78369 228 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 PTP4A2Q12974 167 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 ZPBP2Q6X784 338 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 IFT122Q9HBG6 1241 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 LRRC37A2A6NM11 1700 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 DOCK3Q8IZD9 2030 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 GOLGA6L7A0A1B0GV03 622 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 GH1P01241 217 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 KRT3P12035 628 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 AKAP5P24588 427 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 IL1R2P27930 398 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 GCLCP48506 637 aaPredicted RBP9.93□□□□□ -0.82
TOP3A-203ENST00000469739 MBTD1Q05BQ5 628 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 GPR162Q16538 588 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 TLDC1Q6P9B6 456 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 CCDC62Q6P9F0 684 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 CYB5D1Q6P9G0 228 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 LRIG3Q6UXM1 1119 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 ZC3H18Q86VM9 953 aaKnown RBP9.93□□□□□ -0.82
TOP3A-203ENST00000469739 SRRM1Q8IYB3 904 aaKnown RBP9.93□□□□□ -0.82
TOP3A-203ENST00000469739 CYP4X1Q8N118 509 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 MIS12Q9H081 205 aa9.93□□□□□ -0.82
TOP3A-203ENST00000469739 XYLT2Q9H1B5 865 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms