RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 OTUD4Q01804 1114 aaKnown RBP18.8■□□□□ 0.6
MCF2L-221ENST00000469415 MMP19Q99542 508 aa18.8■□□□□ 0.6
MCF2L-221ENST00000469415 CDT1Q9H211 546 aa18.8■□□□□ 0.6
MCF2L-221ENST00000469415 RBPJLQ9UBG7 517 aa18.8■□□□□ 0.6
MCF2L-221ENST00000469415 CPSF3Q9UKF6 684 aaKnown RBP18.8■□□□□ 0.6
MCF2L-221ENST00000469415 IGKV6D-21A0A0A0MT36 114 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 E2F5Q15329 346 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 EAPPQ56P03 285 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-221ENST00000469415 ANKRD22Q5VYY1 191 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 JADE1Q6IE81 842 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 PIWIL1Q96J94 861 aaKnown RBP18.79■□□□□ 0.6
MCF2L-221ENST00000469415 APOL6Q9BWW8 343 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 STMN4Q9H169 189 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-221ENST00000469415 FAM189A1O60320 539 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 PAEPP09466 180 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 INSRRP14616 1297 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 EFNA5P52803 228 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 PKN2Q16513 984 aaKnown RBP18.79■□□□□ 0.6
MCF2L-221ENST00000469415 RFX6Q8HWS3 928 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 TGS1Q96RS0 853 aaKnown RBP18.79■□□□□ 0.6
MCF2L-221ENST00000469415 TMEM134Q9H6X4 195 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 PHIPQ8WWQ0 1821 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 CALB1P05937 261 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 BASP1P80723 227 aaKnown RBP18.79■□□□□ 0.6
MCF2L-221ENST00000469415 C15orf59Q2T9L4 293 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-221ENST00000469415 BBS9Q3SYG4 887 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 GLRA4Q5JXX5 417 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 FAXCQ5TGI0 409 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 MPZL3Q6UWV2 235 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 RCOR2Q8IZ40 523 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 C1orf127Q8N9H9 656 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 FAM71DQ8N9W8 422 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 KCTD6Q8NC69 237 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 XYLT2Q9H1B5 865 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 RNF181Q9P0P0 153 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 AGAP1Q9UPQ3 857 aa18.79■□□□□ 0.6
MCF2L-221ENST00000469415 PIGRP01833 764 aa18.78■□□□□ 0.6
MCF2L-221ENST00000469415 STAG3L1P0CL83 205 aa18.78■□□□□ 0.6
MCF2L-221ENST00000469415 POLR2BP30876 1174 aaKnown RBP18.78■□□□□ 0.6
MCF2L-221ENST00000469415 CELF3Q5SZQ8 465 aaKnown RBP18.78■□□□□ 0.6
MCF2L-221ENST00000469415 ZPBP2Q6X784 338 aa18.78■□□□□ 0.6
MCF2L-221ENST00000469415 ARFGAP1Q8N6T3 406 aa18.78■□□□□ 0.6
MCF2L-221ENST00000469415 NETO2Q8NC67 525 aa18.78■□□□□ 0.6
MCF2L-221ENST00000469415 FAM49BQ9NUQ9 324 aa18.78■□□□□ 0.6
MCF2L-221ENST00000469415 NKIRAS1Q9NYS0 192 aa18.78■□□□□ 0.6
MCF2L-221ENST00000469415 KCNG1Q9UIX4 513 aa18.78■□□□□ 0.6
MCF2L-221ENST00000469415 HES2Q9Y543 173 aa18.78■□□□□ 0.6
MCF2L-221ENST00000469415 KAT6AQ92794 2004 aa18.78■□□□□ 0.6
MCF2L-221ENST00000469415 CCT8L1PA6NM43 557 aa18.78■□□□□ 0.6
MCF2L-221ENST00000469415 SOCS7O14512 581 aa18.78■□□□□ 0.6
MCF2L-221ENST00000469415 ERBB2P04626 1255 aa18.78■□□□□ 0.6
MCF2L-221ENST00000469415 DNAJC3Q13217 504 aa18.78■□□□□ 0.6
MCF2L-221ENST00000469415 FAM102AQ5T9C2 384 aaPredicted RBP18.78■□□□□ 0.6
MCF2L-221ENST00000469415 SPATS2Q86XZ4 545 aaKnown RBP18.78■□□□□ 0.6
MCF2L-221ENST00000469415 TBC1D31Q96DN5 1066 aa18.78■□□□□ 0.6
MCF2L-221ENST00000469415 RBM41Q96IZ5 413 aaKnown RBP18.78■□□□□ 0.6
MCF2L-221ENST00000469415 FAM49AQ9H0Q0 323 aaPredicted RBP18.78■□□□□ 0.6
MCF2L-221ENST00000469415 SIX4Q9UIU6 781 aa18.78■□□□□ 0.6
MCF2L-221ENST00000469415 TRIM33Q9UPN9 1127 aa18.78■□□□□ 0.6
MCF2L-221ENST00000469415 A0A1W2PPM1 405 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 TCRBV7S3A2A0A539 114 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 FSBPO95073 299 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 KLRC2P26717 231 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 TFDP3Q5H9I0 405 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 C1orf228Q6PIY5 440 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 NLRP7Q8WX94 980 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 CCT6BQ92526 530 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 CCDC77Q9BR77 488 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 SLCO1B3Q9NPD5 702 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 BAIAP2L1Q9UHR4 511 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 PNMA3Q9UL41 463 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 hCG_1818297A0A087WSY0 165 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 HCRTO43612 131 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 LRCH4O75427 683 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 MAN1A1P33908 653 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 MXD4Q14582 209 aaPredicted RBP18.77■□□□□ 0.6
MCF2L-221ENST00000469415 OR6B2Q6IFH4 312 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 GPC2Q8N158 579 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 RSAD2Q8WXG1 361 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 SERPINB12Q96P63 405 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 KLC4Q9NSK0 619 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 STK38LQ9Y2H1 464 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 LOXHD1Q8IVV2 1947 aa18.77■□□□□ 0.6
MCF2L-221ENST00000469415 UBOX5O94941 541 aa18.76■□□□□ 0.59
MCF2L-221ENST00000469415 GTF2A1P52655 376 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-221ENST00000469415 ELOVL4Q9GZR5 314 aa18.76■□□□□ 0.59
MCF2L-221ENST00000469415 EVPLQ92817 2033 aa18.76■□□□□ 0.59
MCF2L-221ENST00000469415 CDKN2BP42772 138 aa18.76■□□□□ 0.59
MCF2L-221ENST00000469415 ZNF132P52740 706 aa18.76■□□□□ 0.59
MCF2L-221ENST00000469415 SPDYCQ5MJ68 293 aa18.76■□□□□ 0.59
MCF2L-221ENST00000469415 UNC45BQ8IWX7 931 aa18.76■□□□□ 0.59
MCF2L-221ENST00000469415 C7orf31Q8N865 590 aa18.76■□□□□ 0.59
MCF2L-221ENST00000469415 AFG1LQ8WV93 481 aa18.76■□□□□ 0.59
MCF2L-221ENST00000469415 FGD4Q96M96 766 aa18.76■□□□□ 0.59
MCF2L-221ENST00000469415 TPX2Q9ULW0 747 aaKnown RBP18.76■□□□□ 0.59
MCF2L-221ENST00000469415 HEY1Q9Y5J3 304 aa18.76■□□□□ 0.59
MCF2L-221ENST00000469415 C5orf60A6NFR6 353 aa18.76■□□□□ 0.59
MCF2L-221ENST00000469415 ACKR2O00590 384 aa18.76■□□□□ 0.59
MCF2L-221ENST00000469415 CNMDO75829 334 aa18.76■□□□□ 0.59
MCF2L-221ENST00000469415 CTCFP49711 727 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms