RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 MAB21L3Q8N8X9 362 aa18.59■□□□□ 0.57
TRIM56-203ENST00000467847 DNAJC19Q96DA6 116 aa18.59■□□□□ 0.57
TRIM56-203ENST00000467847 CLIC6Q96NY7 704 aa18.59■□□□□ 0.57
TRIM56-203ENST00000467847 PI4K2AQ9BTU6 479 aa18.59■□□□□ 0.57
TRIM56-203ENST00000467847 TMLHEQ9NVH6 421 aa18.59■□□□□ 0.57
TRIM56-203ENST00000467847 C2orf42Q9NWW7 574 aa18.59■□□□□ 0.57
TRIM56-203ENST00000467847 AGAP1Q9UPQ3 857 aa18.59■□□□□ 0.57
TRIM56-203ENST00000467847 SRPRBQ9Y5M8 271 aaKnown RBP18.59■□□□□ 0.57
TRIM56-203ENST00000467847 PRPF40AO75400 957 aaKnown RBP18.58■□□□□ 0.56
TRIM56-203ENST00000467847 ITGB3P05106 788 aa18.58■□□□□ 0.56
TRIM56-203ENST00000467847 ADRB1P08588 477 aa18.58■□□□□ 0.56
TRIM56-203ENST00000467847 HMGA1P17096 107 aaKnown RBP18.58■□□□□ 0.56
TRIM56-203ENST00000467847 CEBPZQ03701 1054 aaKnown RBP18.58■□□□□ 0.56
TRIM56-203ENST00000467847 BFSP1Q12934 665 aa18.58■□□□□ 0.56
TRIM56-203ENST00000467847 NFE2Q16621 373 aaPredicted RBP18.58■□□□□ 0.56
TRIM56-203ENST00000467847 TMEM150AQ86TG1 271 aa18.58■□□□□ 0.56
TRIM56-203ENST00000467847 BRSK2Q8IWQ3 736 aa18.58■□□□□ 0.56
TRIM56-203ENST00000467847 SYCP3Q8IZU3 236 aa18.58■□□□□ 0.56
TRIM56-203ENST00000467847 PDCL2Q8N4E4 241 aa18.58■□□□□ 0.56
TRIM56-203ENST00000467847 ZSWIM2Q8NEG5 633 aa18.58■□□□□ 0.56
TRIM56-203ENST00000467847 CACTINQ8WUQ7 758 aaKnown RBP18.58■□□□□ 0.56
TRIM56-203ENST00000467847 GKN1Q9NS71 199 aa18.58■□□□□ 0.56
TRIM56-203ENST00000467847 RBAKQ9NYW8 714 aaPredicted RBP18.58■□□□□ 0.56
TRIM56-203ENST00000467847 MAGED2Q9UNF1 606 aaPredicted RBP18.58■□□□□ 0.56
TRIM56-203ENST00000467847 CCL26Q9Y258 94 aa18.58■□□□□ 0.56
TRIM56-203ENST00000467847 PCDHB13Q9Y5F0 798 aa18.58■□□□□ 0.56
TRIM56-203ENST00000467847 HUS1O60921 280 aa18.57■□□□□ 0.56
TRIM56-203ENST00000467847 LRP3O75074 770 aa18.57■□□□□ 0.56
TRIM56-203ENST00000467847 LDHAP00338 332 aaKnown RBP18.57■□□□□ 0.56
TRIM56-203ENST00000467847 F11P03951 625 aa18.57■□□□□ 0.56
TRIM56-203ENST00000467847 IDEP14735 1019 aa18.57■□□□□ 0.56
TRIM56-203ENST00000467847 DDX6P26196 483 aaKnown RBP eCLIP18.57■□□□□ 0.56
TRIM56-203ENST00000467847 GPR15P49685 360 aa18.57■□□□□ 0.56
TRIM56-203ENST00000467847 CASP5P51878 434 aa18.57■□□□□ 0.56
TRIM56-203ENST00000467847 CUL4AQ13619 759 aa18.57■□□□□ 0.56
TRIM56-203ENST00000467847 C1orf127Q8N9H9 656 aa18.57■□□□□ 0.56
TRIM56-203ENST00000467847 STKLD1Q8NE28 680 aa18.57■□□□□ 0.56
TRIM56-203ENST00000467847 NOC3LQ8WTT2 800 aaKnown RBP18.57■□□□□ 0.56
TRIM56-203ENST00000467847 USP13Q92995 863 aaPredicted RBP18.57■□□□□ 0.56
TRIM56-203ENST00000467847 OLFML3Q9NRN5 406 aa18.57■□□□□ 0.56
TRIM56-203ENST00000467847 DDX43Q9NXZ2 648 aaKnown RBP18.57■□□□□ 0.56
TRIM56-203ENST00000467847 L1RE1Q9UN81 338 aa18.57■□□□□ 0.56
TRIM56-203ENST00000467847 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.57■□□□□ 0.56
TRIM56-203ENST00000467847 ATG2BQ96BY7 2078 aa18.57■□□□□ 0.56
TRIM56-203ENST00000467847 SPAG17Q6Q759 2223 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 GOLGA8IPA6NC78 632 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 GOLGA8JA6NMD2 632 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 CSH1P0DML2 217 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 CSH2P0DML3 217 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 GARTP22102 1010 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 STAT6P42226 847 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 MYL7Q01449 175 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 RESTQ13127 1097 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 ALCAMQ13740 583 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 SDHAF4Q5VUM1 108 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 TXNDC8Q6A555 127 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 TRIM68Q6AZZ1 485 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 FAM173BQ6P4H8 233 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 CCDC73Q6ZRK6 1079 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 CEP68Q76N32 757 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 CSGALNACT2Q8N6G5 542 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 LRRC52Q8N7C0 313 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 LEO1Q8WVC0 666 aaPredicted RBP18.56■□□□□ 0.56
TRIM56-203ENST00000467847 MRPS31Q92665 395 aaKnown RBP18.56■□□□□ 0.56
TRIM56-203ENST00000467847 FAM83CQ9BQN1 747 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 ACBD6Q9BR61 282 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 EBF3Q9H4W6 596 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 KIF9Q9HAQ2 790 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 ABCB6Q9NP58 842 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 TDP1Q9NUW8 608 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 ITGA11Q9UKX5 1188 aa18.56■□□□□ 0.56
TRIM56-203ENST00000467847 SDK1Q7Z5N4 2213 aa18.55■□□□□ 0.56
TRIM56-203ENST00000467847 EXTL3O43909 919 aa18.55■□□□□ 0.56
TRIM56-203ENST00000467847 KRT19P08727 400 aa18.55■□□□□ 0.56
TRIM56-203ENST00000467847 ACAT1P24752 427 aaKnown RBP18.55■□□□□ 0.56
TRIM56-203ENST00000467847 CYP2F1P24903 491 aa18.55■□□□□ 0.56
TRIM56-203ENST00000467847 HOXA6P31267 233 aa18.55■□□□□ 0.56
TRIM56-203ENST00000467847 RPL10AP62906 217 aaKnown RBP18.55■□□□□ 0.56
TRIM56-203ENST00000467847 GRSF1Q12849 480 aaKnown RBP eCLIP18.55■□□□□ 0.56
TRIM56-203ENST00000467847 RUNX3Q13761 415 aa18.55■□□□□ 0.56
TRIM56-203ENST00000467847 DDR2Q16832 855 aa18.55■□□□□ 0.56
TRIM56-203ENST00000467847 PPM1JQ5JR12 505 aa18.55■□□□□ 0.56
TRIM56-203ENST00000467847 INTS6LQ5JSJ4 861 aaKnown RBP18.55■□□□□ 0.56
TRIM56-203ENST00000467847 CC2D1AQ6P1N0 951 aaPredicted RBP18.55■□□□□ 0.56
TRIM56-203ENST00000467847 MON1AQ86VX9 555 aa18.55■□□□□ 0.56
TRIM56-203ENST00000467847 TMEM86AQ8N2M4 240 aa18.55■□□□□ 0.56
TRIM56-203ENST00000467847 FAM84AQ96KN4 292 aa18.55■□□□□ 0.56
TRIM56-203ENST00000467847 CBWD1Q9BRT8 395 aa18.55■□□□□ 0.56
TRIM56-203ENST00000467847 PANK2Q9BZ23 570 aa18.55■□□□□ 0.56
TRIM56-203ENST00000467847 HPS4Q9NQG7 708 aa18.55■□□□□ 0.56
TRIM56-203ENST00000467847 SEMA4GQ9NTN9 838 aa18.55■□□□□ 0.56
TRIM56-203ENST00000467847 PANK4Q9NVE7 773 aa18.55■□□□□ 0.56
TRIM56-203ENST00000467847 CACNA1GO43497 2377 aa18.54■□□□□ 0.56
TRIM56-203ENST00000467847 OTOL1A6NHN0 477 aaPredicted RBP18.54■□□□□ 0.56
TRIM56-203ENST00000467847 SOBPA7XYQ1 873 aa18.54■□□□□ 0.56
TRIM56-203ENST00000467847 KCNA4P22459 653 aa18.54■□□□□ 0.56
TRIM56-203ENST00000467847 HOXC13P31276 330 aa18.54■□□□□ 0.56
TRIM56-203ENST00000467847 RBP5P82980 135 aa18.54■□□□□ 0.56
TRIM56-203ENST00000467847 CSRP2Q16527 193 aa18.54■□□□□ 0.56
TRIM56-203ENST00000467847 TMEM196Q5HYL7 178 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms