RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 AGPAT3Q9NRZ7 376 aa11.14□□□□□ -0.63
SSR3-205ENST00000467789 INTS13Q9NVM9 706 aa11.14□□□□□ -0.63
SSR3-205ENST00000467789 OBP2AQ9NY56 170 aa11.14□□□□□ -0.63
SSR3-205ENST00000467789 DLGAP2Q9P1A6 1054 aa11.14□□□□□ -0.63
SSR3-205ENST00000467789 SLC27A5Q9Y2P5 690 aa11.14□□□□□ -0.63
SSR3-205ENST00000467789 PCDHB5Q9Y5E4 795 aa11.14□□□□□ -0.63
SSR3-205ENST00000467789 GTF3C3Q9Y5Q9 886 aa11.14□□□□□ -0.63
SSR3-205ENST00000467789 NUP210Q8TEM1 1887 aaPredicted RBP11.14□□□□□ -0.63
SSR3-205ENST00000467789 ZFHX2Q9C0A1 2572 aaPredicted RBP11.13□□□□□ -0.63
SSR3-205ENST00000467789 A0A1W2PRU2 124 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 KRT19P08727 400 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 FAM163BP0C2L3 166 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 HAPLN1P10915 354 aaPredicted RBP11.13□□□□□ -0.63
SSR3-205ENST00000467789 CMA1P23946 247 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 HOXD13P35453 343 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 WNT7BP56706 349 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 PKP1Q13835 747 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 TEAD2Q15562 447 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 TAF12Q16514 161 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 SNRNP35Q16560 246 aaKnown RBP11.13□□□□□ -0.63
SSR3-205ENST00000467789 FOXD4L6Q3SYB3 417 aaPredicted RBP11.13□□□□□ -0.63
SSR3-205ENST00000467789 FOXD4L3Q6VB84 417 aaPredicted RBP11.13□□□□□ -0.63
SSR3-205ENST00000467789 CBWD2Q8IUF1 395 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 PDCL2Q8N4E4 241 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 XXYLT1Q8NBI6 393 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 GLIS3Q8NEA6 775 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 ZSWIM2Q8NEG5 633 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 FAM200AQ8TCP9 573 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 NOC3LQ8WTT2 800 aaKnown RBP11.13□□□□□ -0.63
SSR3-205ENST00000467789 TMEM174Q8WUU8 243 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 SCFD1Q8WVM8 642 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 FUBP3Q96I24 572 aaKnown RBP eCLIP11.13□□□□□ -0.63
SSR3-205ENST00000467789 SPATA32Q96LK8 384 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 CEP295NLQ96MC4 621 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 GCNAQ96QF7 691 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 FNBP1Q96RU3 617 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 PHOX2BQ99453 314 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 SEPT5Q99719 369 aaPredicted RBP11.13□□□□□ -0.63
SSR3-205ENST00000467789 PLA2G2FQ9BZM2 168 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 MTMR12Q9C0I1 747 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 LTB4R2Q9NPC1 389 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 L1RE1Q9UN81 338 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 USP34Q70CQ2 3546 aa11.13□□□□□ -0.63
SSR3-205ENST00000467789 GABRDO14764 452 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 ZNF263O14978 683 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 CHADO15335 359 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 TGFB1I1O43294 461 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 CSH1P0DML2 217 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 CSH2P0DML3 217 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 ATF6P18850 670 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 GABRR2P28476 465 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 RPS9P46781 194 aaKnown RBP11.12□□□□□ -0.63
SSR3-205ENST00000467789 RPL10AP62906 217 aaKnown RBP11.12□□□□□ -0.63
SSR3-205ENST00000467789 FCHO2Q0JRZ9 810 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 BFSP1Q12934 665 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 PSMD6Q15008 389 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 MAPRE1Q15691 268 aaKnown RBP11.12□□□□□ -0.63
SSR3-205ENST00000467789 KNOP1Q1ED39 458 aaKnown RBP11.12□□□□□ -0.63
SSR3-205ENST00000467789 PROX2Q3B8N5 592 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 CFAP221Q4G0U5 840 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 ZC3H14Q6PJT7 736 aaKnown RBP11.12□□□□□ -0.63
SSR3-205ENST00000467789 VITQ6UXI7 678 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 TPRG1Q6ZUI0 275 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 GAREM2Q75VX8 874 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 LIMS2Q7Z4I7 341 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 LRRTM3Q86VH5 581 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 LAPTM4BQ86VI4 370 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 C1orf210Q8IVY1 113 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 ADGRF2Q8IZF7 708 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 TTC9BQ8N6N2 239 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 ST13P5Q8NFI4 369 aaPredicted RBP11.12□□□□□ -0.63
SSR3-205ENST00000467789 HPS3Q969F9 1004 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 HPDLQ96IR7 371 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 ZSWIM3Q96MP5 696 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 IER2Q9BTL4 223 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 SCAND2PQ9GZW5 306 aaPredicted RBP11.12□□□□□ -0.63
SSR3-205ENST00000467789 ATXN3LQ9H3M9 355 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 FAM86C1Q9NVL1 165 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 DDX43Q9NXZ2 648 aaKnown RBP11.12□□□□□ -0.63
SSR3-205ENST00000467789 ABI2Q9NYB9 513 aaPredicted RBP11.12□□□□□ -0.63
SSR3-205ENST00000467789 SIX4Q9UIU6 781 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 SNX9Q9Y5X1 595 aa11.12□□□□□ -0.63
SSR3-205ENST00000467789 DENND4CQ5VZ89 1909 aa11.11□□□□□ -0.63
SSR3-205ENST00000467789 FAM170BA6NMN3 283 aa11.11□□□□□ -0.63
SSR3-205ENST00000467789 HEPACAM2A8MVW5 462 aa11.11□□□□□ -0.63
SSR3-205ENST00000467789 GFRA3O60609 400 aa11.11□□□□□ -0.63
SSR3-205ENST00000467789 KIF20AO95235 890 aa11.11□□□□□ -0.63
SSR3-205ENST00000467789 STAU1O95793 577 aaKnown RBP11.11□□□□□ -0.63
SSR3-205ENST00000467789 DCNP07585 359 aaKnown RBP11.11□□□□□ -0.63
SSR3-205ENST00000467789 GJA1P17302 382 aa11.11□□□□□ -0.63
SSR3-205ENST00000467789 TNNI1P19237 187 aa11.11□□□□□ -0.63
SSR3-205ENST00000467789 DDX6P26196 483 aaKnown RBP eCLIP11.11□□□□□ -0.63
SSR3-205ENST00000467789 GDI1P31150 447 aa11.11□□□□□ -0.63
SSR3-205ENST00000467789 AFMP43652 599 aa11.11□□□□□ -0.63
SSR3-205ENST00000467789 AP3M2P53677 418 aa11.11□□□□□ -0.63
SSR3-205ENST00000467789 CYP24A1Q07973 514 aa11.11□□□□□ -0.63
SSR3-205ENST00000467789 CUL4BQ13620 913 aa11.11□□□□□ -0.63
SSR3-205ENST00000467789 UBXN2BQ14CS0 331 aa11.11□□□□□ -0.63
SSR3-205ENST00000467789 SOWAHAQ2M3V2 549 aa11.11□□□□□ -0.63
SSR3-205ENST00000467789 ZNF528Q3MIS6 628 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms