RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 DOC2AQ14183 400 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 AAK1Q2M2I8 961 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 FAM47CQ5HY64 1035 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 PGBD2Q6P3X8 592 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 FAM173BQ6P4H8 233 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 LILRA6Q6PI73 481 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 FAM228AQ86W67 206 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 LSMEM2Q8N112 164 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 GALNT15Q8N3T1 639 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 IGSF22Q8N9C0 903 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 C3orf20Q8ND61 904 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 OR10H5Q8NGA6 315 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 GRK7Q8WTQ7 553 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 TMEM40Q8WWA1 233 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 OSBP2Q969R2 916 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 NCLNQ969V3 563 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 CNOT6LQ96LI5 555 aaKnown RBP8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 INTS2Q9H0H0 1204 aaKnown RBP8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 KAT14Q9H8E8 782 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 GORASP2Q9H8Y8 452 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 ANO10Q9NW15 660 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 TUBA8Q9NY65 449 aaPredicted RBP8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 COQ3Q9NZJ6 369 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 SUCLA2Q9P2R7 463 aaPredicted RBP8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 MTRF1LQ9UGC7 380 aaKnown RBP8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 FOXD3Q9UJU5 478 aaPredicted RBP8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 GGA2Q9UJY4 613 aa8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 NPHP4O75161 1426 aaPredicted RBP8.1□□□□□ -1.11
SPTBN1-204ENST00000467371 TRBV23-1A0A0A0MS06 115 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 BECN2A8MW95 431 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 RANBP6O60518 1105 aaKnown RBP8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 TACC1O75410 805 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 ASLP04424 464 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 FESP07332 822 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 GAAP10253 952 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 CDK4P11802 303 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 IL15P40933 162 aaPredicted RBP8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 ARHGDIBP52566 201 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 TLE2Q04725 743 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 TUBA3CQ13748 450 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 CRY1Q16526 586 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 DPYSL2Q16555 572 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 CEP85LQ5SZL2 805 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 ANKS4BQ8N8V4 417 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 ZUFSPQ96AP4 578 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 TMIGD2Q96BF3 282 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 SPXQ9BT56 116 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 SH2B1Q9NRF2 756 aaPredicted RBP8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 HYPKQ9NX55 129 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 USP36Q9P275 1121 aaKnown RBP8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 OR6C65A6NJZ3 312 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 GJB1P08034 283 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 KCNA5P22460 613 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 RPL13P26373 211 aaKnown RBP8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 PTK2Q05397 1052 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 XKR3Q5GH77 459 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 NAA16Q6N069 864 aaPredicted RBP8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 ZNF765Q7L2R6 523 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 C19orf60Q96EN9 201 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 SH3GL2Q99962 352 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 EPN3Q9H201 632 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 GDAP2Q9NXN4 497 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 EHD3Q9NZN3 535 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 HMG20BQ9P0W2 317 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 PPP2R2CQ9Y2T4 447 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 SNX14Q9Y5W7 946 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 CAPN8A6NHC0 703 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 IFNB1P01574 187 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 JMJD7P0C870 316 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 TECP42680 631 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 CCT4P50991 539 aaKnown RBP8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 RAD23AP54725 363 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 DRP2Q13474 957 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 GRM2Q14416 872 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 NFE2L1Q14494 772 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 CNGA2Q16280 664 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 TRIM71Q2Q1W2 868 aaKnown RBP8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 SNX30Q5VWJ9 437 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 CENPPQ6IPU0 288 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 NEK5Q6P3R8 708 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 KRT25Q7Z3Z0 450 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 ANKLE2Q86XL3 938 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 OR2W6PQ8NHA6 318 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 LMBR1Q8WVP7 490 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 DIO2Q92813 273 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 CORO1BQ9BR76 489 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 MID1IP1Q9NPA3 183 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 SRP68Q9UHB9 627 aaKnown RBP8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 TLL2Q9Y6L7 1015 aa8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 CPSF1Q10570 1443 aaKnown RBP8.09□□□□□ -1.11
SPTBN1-204ENST00000467371 AGAP14A8MT82 685 aa8.08□□□□□ -1.12
SPTBN1-204ENST00000467371 PSMD9O00233 223 aa8.08□□□□□ -1.12
SPTBN1-204ENST00000467371 KRIT1O00522 736 aa8.08□□□□□ -1.12
SPTBN1-204ENST00000467371 NVLO15381 856 aaKnown RBP8.08□□□□□ -1.12
SPTBN1-204ENST00000467371 SMAD6O43541 496 aaKnown RBP8.08□□□□□ -1.12
SPTBN1-204ENST00000467371 TBX10O75333 385 aa8.08□□□□□ -1.12
SPTBN1-204ENST00000467371 S100A9P06702 114 aaKnown RBP8.08□□□□□ -1.12
SPTBN1-204ENST00000467371 SLC10A3P09131 477 aa8.08□□□□□ -1.12
SPTBN1-204ENST00000467371 TFE3P19532 575 aaPredicted RBP8.08□□□□□ -1.12
SPTBN1-204ENST00000467371 USP6P35125 1406 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms